Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0771
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.2  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 77  CFQ*YEFNLKFTVEF 33
           C   YEFN  FT+ +
Sbjct: 246 CIAGYEFNANFTISY 260


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 283 QTFINKFVRGFNSIKSSG 230
           QTF N  + GF  ++ SG
Sbjct: 118 QTFSNLNISGFGGVQESG 135


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 161 VIVELICFLTILFVNWKIVWL 223
           +I ++I  + +L  + KIVWL
Sbjct: 254 IITQVIFVICVLVQSEKIVWL 274


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 179 CFLTILFVNWKIVWLK 226
           C L ++ + W I WL+
Sbjct: 49  CLLMVVKILWVIYWLQ 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,557
Number of Sequences: 336
Number of extensions: 1581
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)