Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0767
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 295 2e-80
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 180 7e-46
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 169 2e-42
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 113 1e-25
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 113 1e-25
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 112 3e-25
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 112 3e-25
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 103 1e-22
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 95 4e-20
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 85 7e-17
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 85 7e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 82 4e-16
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 69 5e-12
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 66 2e-11
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 66 3e-11
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 64 8e-11
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 61 7e-10
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 61 9e-10
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 60 1e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 57 2e-08
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 56 3e-08
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 49 4e-06
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 46 3e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 46 4e-05
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z66523-1|CAA91411.1| 361|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z49966-3|CAA90241.1| 361|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 29 4.7
AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical ... 28 6.2
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 295 bits (724), Expect = 2e-80
Identities = 129/162 (79%), Positives = 149/162 (91%)
Frame = +1
Query: 34 QSSLLLKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKE 213
QSSLLLKKQLA++ + PV GFSAGL+DDNDIYKWEVL+IGPPDTLYEGGFFKA L+FP++
Sbjct: 3 QSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRD 62
Query: 214 YPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISV 393
YP +PP+MKF++EIWHPNIDK G+VCISILH+PGDDKWGYE+ ERWLPVHTVETIL+SV
Sbjct: 63 YPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSV 122
Query: 394 ISMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQED 519
ISML DPN ESPANVDAAK RE Y+EFKKKVA+CVR+SQE+
Sbjct: 123 ISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQEE 164
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 180 bits (439), Expect = 7e-46
Identities = 81/154 (52%), Positives = 107/154 (69%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L + EL P G A ID+++ ++WE LI GP +T + G F A + FP++YPL P
Sbjct: 9 LMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSP 68
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P+M+F I+HPNI +G VCISILH PGDD GYE ++ERW PV ++E IL+SV+SMLA
Sbjct: 69 PKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSMLA 128
Query: 409 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 510
+PNDESPANV AAK WRE ++F+K VRK+
Sbjct: 129 EPNDESPANVSAAKMWREDRAQFEKIADSLVRKT 162
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 169 bits (410), Expect = 2e-42
Identities = 80/160 (50%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L +L L PV GF+ + +DN ++ W V I GPP TLY+GG+FKA + FP YP P
Sbjct: 15 LTMELKNLQSQPVEGFTIDVNEDN-LFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSP 73
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P MKF T++WHPN+ +NGD+CISILH P DD E A ERW P +V TIL+SVIS+L
Sbjct: 74 PSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLN 133
Query: 409 DPNDESPANVDAA---KEWRE-RYSEFKKKVARCVRKSQE 516
+PN SPANVDA+ ++W+E + E+ K V + V +S++
Sbjct: 134 EPNTSSPANVDASVMYRKWKEDQDPEYAKIVTKQVEESKK 173
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 113 bits (273), Expect = 1e-25
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F ++FP +YP +P
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P++ F T I+HPNI+ NG +C+ IL +W P T+ +L+S+ S+L
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLC 111
Query: 409 DPNDESPANVDAAKEW---RERYSEFKKK 486
DPN + P + A+ + RERY++ ++
Sbjct: 112 DPNPDDPLVPEIARIYKTDRERYNQLARE 140
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 113 bits (273), Expect = 1e-25
Identities = 52/149 (34%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
++K+L +L ++P SAG + D D++ W+ I+GPP++ Y+GG F ++FP +YP +P
Sbjct: 6 IQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P++ F T I+HPNI+ NG +C+ IL +W P T+ +L+S+ S+L
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLC 111
Query: 409 DPNDESPANVDAAKEW---RERYSEFKKK 486
DPN + P + A+ + RERY++ ++
Sbjct: 112 DPNPDDPLVPEIARIYKTDRERYNQLARE 140
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 112 bits (269), Expect = 3e-25
Identities = 57/154 (37%), Positives = 89/154 (57%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L + +L ++P G S +DN I WE +I GP +T +E G FK L F +EYP +P
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P +KF+++++HPN+ +G +C+ IL RW P + V IL S+ S+L
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAILTSIQSLLD 114
Query: 409 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 510
+PN SPAN AA+ ++E E++K+V + V +S
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 112 bits (269), Expect = 3e-25
Identities = 57/154 (37%), Positives = 89/154 (57%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L + +L ++P G S +DN I WE +I GP +T +E G FK L F +EYP +P
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDN-ILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P +KF+++++HPN+ +G +C+ IL RW P + V IL S+ S+L
Sbjct: 68 PTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAILTSIQSLLD 114
Query: 409 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKS 510
+PN SPAN AA+ ++E E++K+V + V +S
Sbjct: 115 EPNPNSPANSLAAQLYQENRREYEKRVQQIVEQS 148
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 103 bits (248), Expect = 1e-22
Identities = 51/140 (36%), Positives = 81/140 (57%)
Frame = +1
Query: 55 KQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPR 234
K+ L +PV G SA + N Y + V+I GP D+ + GG FK L P+EYP+ P+
Sbjct: 11 KETQRLLADPVPGISANPDESNARY-FHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPK 69
Query: 235 MKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADP 414
++F+T+I+HPNIDK G +C+ IL ++W P + T+L+S+ ++L+ P
Sbjct: 70 VRFMTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 116
Query: 415 NDESPANVDAAKEWRERYSE 474
N E P D A++W+ +E
Sbjct: 117 NPEDPLATDVAEQWKTNEAE 136
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 95.5 bits (227), Expect = 4e-20
Identities = 46/156 (29%), Positives = 82/156 (52%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L+K+L +L V + ++ ++ KW VL+I P Y G FK + FP +YP +P
Sbjct: 7 LQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKP 65
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P++ F T+I+HPN+D+ G C+ I+ +E W P E ++++++S++
Sbjct: 66 PKVAFETKIYHPNVDEEGKFCLPIV------------TAENWKPATKTEQVMMALLSLIN 113
Query: 409 DPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQE 516
+P P D A+E+++ + +F K RK E
Sbjct: 114 EPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHAE 149
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 84.6 bits (200), Expect = 7e-17
Identities = 39/125 (31%), Positives = 71/125 (56%)
Frame = +1
Query: 121 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 300
+++ WE I G DT++EGG ++ + F ++P PP+ KF ++HPN+ +G VC+S+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 301 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 480
L E D W P +++ +LI + +L PN E PA +A + + + +E++
Sbjct: 97 LDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYE 145
Query: 481 KKVAR 495
K+V +
Sbjct: 146 KRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 84.6 bits (200), Expect = 7e-17
Identities = 39/125 (31%), Positives = 71/125 (56%)
Frame = +1
Query: 121 DIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISI 300
+++ WE I G DT++EGG ++ + F ++P PP+ KF ++HPN+ +G VC+S+
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 301 LHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 480
L E D W P +++ +LI + +L PN E PA +A + + + +E++
Sbjct: 97 LDENKD-----------WKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYE 145
Query: 481 KKVAR 495
K+V +
Sbjct: 146 KRVKK 150
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Frame = +1
Query: 145 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNI-DKNGDVCISILHEPGDD 321
I GPPDT Y GG F + P +YP PP +KF T+IWHPN+ + G +C+ IL
Sbjct: 43 IRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL------ 96
Query: 322 KWGYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFK 480
++W T+ T+L+S+ +++ P + P + AK++ E+ + FK
Sbjct: 97 -------KDQWAASLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFK 142
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 79.4 bits (187), Expect = 3e-15
Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 142 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDD 321
L + P + +Y GG F+ + P EY PP +K +T++WHPNI+++G +C+SIL + D
Sbjct: 63 LTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLD 122
Query: 322 KWGYEKASERWLPVHTVETILISVISMLADPNDESPA-NVDAAKEWRERYSEFKKKVARC 498
++G W P + ++ ++S+ D D + A N+ AA+ W + F +V
Sbjct: 123 QYG-------WRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREY 175
Query: 499 VRK 507
+ +
Sbjct: 176 ISR 178
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 69.3 bits (162), Expect = 3e-12
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Frame = +1
Query: 49 LKKQLAELNKNP---VXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYP 219
++K++A+L KN + F + DI++++++ G LY+ F L+ EYP
Sbjct: 18 IRKEIADLAKNKRRFIKDFRK-IEKCKDIFQFKIIGDG---VLYKNMIFTLTLDVNVEYP 73
Query: 220 LRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 396
+PP +KF ++HPN+D ++C +L + E W P T+E +L+++I
Sbjct: 74 FKPPYLKFCHNVYHPNVDPVTCELCSPMLLQ------------ENWKPETTMEDVLLNLI 121
Query: 397 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRK 507
+L +P+ P N+DAA ++ EF KK +K
Sbjct: 122 VLLNEPDLSRPVNIDAAHDYIHNKVEFVKKSTELAKK 158
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 68.5 bits (160), Expect = 5e-12
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSA-GLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLR 225
L K+LA+L G ND+ +W++ ++G TLY G F F +YP
Sbjct: 9 LMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFN 68
Query: 226 PPRMKFVTEI--WHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVIS 399
P + FV E HP+I NG +C+SIL S+ W P +V+++ +S++S
Sbjct: 69 SPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALSVQSVCLSILS 115
Query: 400 MLADPNDESPANVDA 444
ML+ ++ DA
Sbjct: 116 MLSSSKEKKHPIDDA 130
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Frame = +1
Query: 109 IDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRM---------------KF 243
I +N++ + I GP T Y GG F+ ++ P+ YP PP++ KF
Sbjct: 45 IKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKF 104
Query: 244 VTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLADPND 420
VT IWHPNI + G +C+ IL ++W T+ T+L+S+ +ML P
Sbjct: 105 VTRIWHPNISSQTGTICLDIL-------------KDKWTASLTLRTVLLSLQAMLCSPEP 151
Query: 421 ESPANVDAAKEWRERYSEF 477
P + AK++ Y F
Sbjct: 152 SDPQDAVVAKQFINNYPMF 170
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/121 (33%), Positives = 59/121 (48%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
LKK L K PV A ++ N I +W +IIG P T YEGG + L FPK++P +P
Sbjct: 13 LKKDYQRLLKEPVPFMKAAPLETN-ILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKP 71
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P + +T + N +C+SI + + W P TV TI+ ++S +
Sbjct: 72 PAILMLTP--NGRFQTNTRLCLSI----------SDYHPDTWNPAWTVSTIITGLMSFMN 119
Query: 409 D 411
D
Sbjct: 120 D 120
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 64.5 bits (150), Expect = 8e-11
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L K+ EL + P + A ++DN +++W I G T +EGG + + FP +YP++P
Sbjct: 15 LMKEAMEL-RQPTEMYHAQPMEDN-LFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKP 72
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P + +T + + N VC+SI GY E WLP ++ T L+++I L
Sbjct: 73 PNLILLTP--NGRFELNKKVCLSIS--------GYH--PETWLPSWSIRTALLALIGFLP 120
Query: 409 DPNDESPANVDAAKEWRERYS----EFKKKVARCVRKS 510
+ ++D + R+R + E+K K CV K+
Sbjct: 121 STPGGALGSLDYPPKERQRLAKLSCEWKCKECGCVMKT 158
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +1
Query: 151 GPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGDDKW 327
GP DT YE G ++ ++ P +YP + P + F+ +I+HPNID+ +G VC+ ++++ +
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQAWTALY 100
Query: 328 GYEKASERWLPVHTVETILISVISMLADPNDESPANVDAAKEWRERYSEFKK 483
+ +LP +L PN P N +AA+ + + E+++
Sbjct: 101 DLTNIFDTFLP------------QLLTYPNAADPLNGEAARLYIHKPEEYRR 140
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.9 bits (141), Expect = 9e-10
Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Frame = +1
Query: 142 LIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHPNIDK-NGDVCISILHEPGD 318
+I G +T YEGG F+ + + YP + P +KF+T+IWHP++ +G +C LH+ +
Sbjct: 384 IIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTIC---LHDVDN 440
Query: 319 DKWGYEKASERWLPVH-TVETILISVISMLADPNDESPANVDAAKEWRERYSEFKK 483
W PV T+ +LI + S +++ N++ P +V+ ++ F+K
Sbjct: 441 GVW----------PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEK 486
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLI--DDNDIY-KWEVLIIGPPDTLYEGGFFKAHLNFPKEYP 219
+K++ A+ ++ G++A I + DI+ W + GP + +EGG ++ +NF K +P
Sbjct: 40 VKEEKAKWDERTPQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WP 98
Query: 220 LRPPRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVIS 399
+ PP +F T + HPN+D G + + +L + E W +++ +L + +
Sbjct: 99 IIPPICEFKTPLHHPNVDLRGSIYLKMLEQ------------EHWSSETSLKKLLREISN 146
Query: 400 MLADPNDESPANVDAAKEWRERYSEFKKK 486
+LA P+ AN++A E+ + ++ K
Sbjct: 147 LLATPDLTQAANIEAWMEYENQRENYEAK 175
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/128 (30%), Positives = 64/128 (50%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L+K A+L ++PV G A L ++++I +W + G PDT + GG++ + F + +P P
Sbjct: 24 LQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWSP 82
Query: 229 PRMKFVTEIWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVISMLA 408
P + +T + N +C+SI + E W P TV ILI + S +
Sbjct: 83 PAITMITP--NGRFQTNTRLCLSI----------SDYHPESWNPGWTVSAILIGLHSFM- 129
Query: 409 DPNDESPA 432
N+ SPA
Sbjct: 130 --NENSPA 135
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 56.0 bits (129), Expect = 3e-08
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Frame = +1
Query: 49 LKKQLAEL-NKNPVXGFSAGLI--DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYP 219
+ K+LA + N P+ ++ + D+ + +VLI GP DT Y G F+ + FP YP
Sbjct: 414 IAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGYP 473
Query: 220 LRPPRMKFVTE-----IWHPNIDKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETIL 384
PP+ F+T ++PN+ +G +C+SIL W + E+W P ++ +L
Sbjct: 474 FSPPKCAFLTTGSGNVRFNPNLYNDGKICLSIL-----GTW-EGRPEEKWNPYCSLMQVL 527
Query: 385 ISV 393
+S+
Sbjct: 528 VSI 530
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 19 LMSEPQSSLLLKKQLAELNKNPVXG-FSAGLIDDND--IYKWEVLIIGPPDTLYEGGFFK 189
++ P++ LL+ +L E K G S GL DD+D + +W IIGPP T YE +
Sbjct: 1 MVDVPRNFRLLE-ELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYN 59
Query: 190 AHLNFPKEYPLRPPRMKFVTEIWHPNIDKNGDV 288
+ YP PP ++F T++ ++++ V
Sbjct: 60 LQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV 92
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFF 186
++K+L +L ++P S G + D D+Y W+ I+GPP++ Y+GG F
Sbjct: 6 IQKELHDLGRDPPAQCSTGSVGD-DLYHWQATIMGPPESPYQGGIF 50
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = +1
Query: 145 IIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWH 261
I GP DT YE G F+ L FP YP P++KF T IW+
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWN 73
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 109 IDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNF-PKEYPLRPPRMKFVTEIWHPNIDKNGD 285
ID+ + V+I GP ++YEGG F A +N P + PR+ F T I+HPN+ K G+
Sbjct: 56 IDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN 115
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 33.9 bits (74), Expect = 0.12
Identities = 36/159 (22%), Positives = 73/159 (45%), Gaps = 4/159 (2%)
Frame = +1
Query: 49 LKKQLAELNKNPVXGFSAGLIDDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRP 228
L + E+ + P+ G +N + V+ + ++ GG F+ +++ P E+P
Sbjct: 24 LAAEFVEVCRAPIDGIFVSPSANNKFLWFGVIFVRKG--IFGGGIFRFNIHIPLEFPDAS 81
Query: 229 --PRMKF-VTEIWHPNI-DKNGDVCISILHEPGDDKWGYEKASERWLPVHTVETILISVI 396
PR+ F + ++HP I K+ ++C++ G W EK S R + V ++ S
Sbjct: 82 DLPRVIFEQSNLFHPLICTKSKELCLNRSFPEG---WKKEKHSLRRVLV-VLQRSFYSY- 136
Query: 397 SMLADPNDESPANVDAAKEWRERYSEFKKKVARCVRKSQ 513
D + + N +A+ ++E +F++ CV S+
Sbjct: 137 ----DVDTDKCINPEASVLYKEHRDKFREIAKECVEASR 171
>Z66523-1|CAA91411.1| 361|Caenorhabditis elegans Hypothetical
protein M05D6.1 protein.
Length = 361
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 488 LPDVLGKVKKIASRSKRIFRKEYIYC*KRAHC--DTGKH 598
LPD GK+K R+K +FR YC H + G+H
Sbjct: 171 LPDASGKLKLREPRNKSMFRGTVRYCSLNVHLHKEQGRH 209
>Z49966-3|CAA90241.1| 361|Caenorhabditis elegans Hypothetical
protein F35C11.3 protein.
Length = 361
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 488 LPDVLGKVKKIASRSKRIFRKEYIYC*KRAHC--DTGKH 598
LPD GK+K R+K +FR YC H + G+H
Sbjct: 171 LPDASGKLKLREPRNKSMFRGTVRYCSLNVHLHKEQGRH 209
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +1
Query: 112 DDNDIYKWEVLIIGPPDTLYEGGFFKAHLNFPKEYPLRPPRMKFVTEIWHP 264
D++ I +WE + PP + +G F+ L E PL M + I P
Sbjct: 622 DEHHIGEWEAVTHDPPRQVLDGAVFRRKLYKSSEQPLMKRLMGSILLIQSP 672
>AF016678-9|AAB66155.1| 155|Caenorhabditis elegans Hypothetical
protein K07E8.10 protein.
Length = 155
Score = 28.3 bits (60), Expect = 6.2
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = -2
Query: 269 IFGCHISVTNFIRGGLKGYSLGKFKCALKKPPSYSVSGGPIMRTSHLYISLSSIKPAEKP 90
+F HI VT F +G K C + PP +S PIM Y S I + P
Sbjct: 81 LFKNHIKVT-FDHA--RGLYRTKHDC--QNPPKIVLSKRPIMDCQQFYQSSEDIDEEQVP 135
Query: 89 XTGFLFSSANC-FFNKS 42
T + SS+N F+KS
Sbjct: 136 STSNVQSSSNAPSFSKS 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,058,394
Number of Sequences: 27780
Number of extensions: 364897
Number of successful extensions: 890
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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