Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0766
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 330 1e-90
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 330 1e-90
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 330 1e-90
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 330 1e-90
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 328 3e-90
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 30 2.6
AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2 pr... 29 8.0
AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon prot... 29 8.0
AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB... 29 8.0
AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA... 29 8.0
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 330 bits (810), Expect = 1e-90
Identities = 158/176 (89%), Positives = 163/176 (92%)
Frame = +1
Query: 1 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 180
VPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQ
Sbjct: 44 VPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQ 103
Query: 181 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 360
RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTV
Sbjct: 104 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTV 163
Query: 361 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSASWFNWHLGKF 528
PCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA LG F
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 500 RGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 628
RGSTGTLGNF LTPDLW+++PL +PY +
Sbjct: 210 RGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 330 bits (810), Expect = 1e-90
Identities = 158/176 (89%), Positives = 163/176 (92%)
Frame = +1
Query: 1 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 180
VPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQ
Sbjct: 44 VPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQ 103
Query: 181 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 360
RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTV
Sbjct: 104 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTV 163
Query: 361 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSASWFNWHLGKF 528
PCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA LG F
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 500 RGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 628
RGSTGTLGNF LTPDLW+++PL +PY +
Sbjct: 210 RGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 330 bits (810), Expect = 1e-90
Identities = 158/176 (89%), Positives = 163/176 (92%)
Frame = +1
Query: 1 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 180
VPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQ
Sbjct: 44 VPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQ 103
Query: 181 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 360
RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTV
Sbjct: 104 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTV 163
Query: 361 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSASWFNWHLGKF 528
PCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA LG F
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 500 RGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 628
RGSTGTLGNF LTPDLW+++PL +PY +
Sbjct: 210 RGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 330 bits (810), Expect = 1e-90
Identities = 158/176 (89%), Positives = 163/176 (92%)
Frame = +1
Query: 1 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 180
VPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQ
Sbjct: 44 VPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQ 103
Query: 181 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 360
RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTV
Sbjct: 104 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTV 163
Query: 361 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSASWFNWHLGKF 528
PCKVTGKCGSV+VRLIPAPRGTGIVSAPVPKKLL MAG++DCYTSA LG F
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 500 RGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 628
RGSTGTLGNF LTPDLW+++PL +PY +
Sbjct: 210 RGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 328 bits (807), Expect = 3e-90
Identities = 157/176 (89%), Positives = 163/176 (92%)
Frame = +1
Query: 1 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 180
VPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQKQTRAGQ
Sbjct: 44 VPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAGQ 103
Query: 181 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 360
RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNKIGKPHTV
Sbjct: 104 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTV 163
Query: 361 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSASWFNWHLGKF 528
PCKVTGKCGSV+VRLIPAPRGTGIVSAPVP+KLL MAG++DCYTSA LG F
Sbjct: 164 PCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGTLGNF 219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 500 RGSTGTLGNFXXXXXXXXXXXXXXLTPDLWRDIPLTKSPYSEF 628
RGSTGTLGNF LTPDLW+++PL +PY +
Sbjct: 210 RGSTGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAY 252
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 349 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMA 471
PH+V K G G + + L+P G G+++ + K+L + A
Sbjct: 907 PHSVAAKRNGNAGKLAL-LLPGASGAGVINEDLEKQLRERA 946
>AF158179-1|AAD48780.1| 1711|Drosophila melanogaster Chiffon-2
protein.
Length = 1711
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 254 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 358
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AF158178-1|AAD48779.1| 1695|Drosophila melanogaster Chiffon protein.
Length = 1695
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 254 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 358
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2711|AAG22437.1| 1695|Drosophila melanogaster CG5813-PB,
isoform B protein.
Length = 1695
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 254 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 358
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
>AE014134-2710|AAF53530.1| 1711|Drosophila melanogaster CG5813-PA,
isoform A protein.
Length = 1711
Score = 28.7 bits (61), Expect = 8.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 254 RKSPLPFEALLSLLSCLFYQFEEVTGVTRSESHTP 358
RKSP + L+L+SC+ Q ++ T SE+ P
Sbjct: 1036 RKSPREHASTLALVSCIIRQRQDSQSKTNSEAEEP 1070
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,107,989
Number of Sequences: 53049
Number of extensions: 818372
Number of successful extensions: 2003
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2003
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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