Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0766
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.2
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.2
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.2
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 1.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.9
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 6.4
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 8.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 8.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.5
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 8.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 39 KNRQTREHLLVFFT 80
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 39 KNRQTREHLLVFFT 80
KN QTREH L+ FT
Sbjct: 56 KNGQTREHALLAFT 69
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 39 KNRQTREHLLVFFT 80
KN QTREH L+ FT
Sbjct: 72 KNGQTREHALLAFT 85
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 39 KNRQTREHLLVFFT 80
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 221 TVILVWV*SAARKSPL 268
T++LVW SAA SP+
Sbjct: 306 TILLVWAISAAIGSPI 321
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +1
Query: 364 CKVTGKCGSVTVRLIPAPRGT 426
C + G CG + + P+GT
Sbjct: 75 CPICGACGDIAHTVKYCPKGT 95
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 517 LGKFC*SHICCHCQDIC 567
LG+F + CC D+C
Sbjct: 49 LGRFKHTDACCRTHDMC 65
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 517 LGKFC*SHICCHCQDIC 567
LG+F + CC D+C
Sbjct: 54 LGRFKHTDACCRTHDMC 70
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 552 LPRHMPTSL 578
LP+H+PTSL
Sbjct: 379 LPKHLPTSL 387
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 24 SCSRRKNRQTRE 59
SCSR +NR+ RE
Sbjct: 236 SCSRDRNREYRE 247
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 517 LGKFC*SHICCHCQDIC 567
LG+F + CC D+C
Sbjct: 54 LGRFKHTDACCRTHDMC 70
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,244
Number of Sequences: 438
Number of extensions: 4872
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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