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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0765
         (700 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55837| Best HMM Match : No HMM Matches (HMM E-Value=.)             132   2e-31
SB_12744| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.055
SB_58701| Best HMM Match : bZIP_2 (HMM E-Value=1.6)                    31   1.2  
SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0)                   30   1.6  
SB_17382| Best HMM Match : Gpi1 (HMM E-Value=2.6)                      29   3.6  
SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26)          28   6.3  
SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035)                 28   6.3  
SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)                   28   8.4  
SB_18060| Best HMM Match : Pepsin-I3 (HMM E-Value=0.67)                28   8.4  
SB_18338| Best HMM Match : MFS_1 (HMM E-Value=0.038)                   28   8.4  

>SB_55837| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 455

 Score =  132 bits (320), Expect = 2e-31
 Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 11/223 (4%)
 Frame = +2

Query: 26  IETEYTLFVPDSVRVK-PRV---LHQAVIEANANPLHVIAIGI-GFHEIKCQRICWNYRD 190
           I T Y +FVPD  R+K P +   +  ++ E+      +IA+ +     ++C  +  + + 
Sbjct: 138 ISTPYVIFVPDGSRLKSPNIFLFMLSSLKESEKTNSKIIAVPVENRFYVECHTLKVDLKK 197

Query: 191 WTLKYT--KDSTGT--ICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKV 358
           WTL+Y   K+ +G   +CD+V+   A+++KT +L  +  P   PFP+SL++Q  +     
Sbjct: 198 WTLQYEMCKNKSGNFMLCDSVSQSVAVILKTAFLHSLSTPYMRPFPQSLFIQASIHHVHT 257

Query: 359 QVLYHTFGPGRKVLKTLPEKQIVAE-KVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDT 535
           ++L+ +  P R  L T P      +  +KE+    YK++ +K V   DGTV  YGC K+T
Sbjct: 258 KLLFKSSIPRRIELFTNPHNDWKHKHNMKERHIQMYKRFGIKKVDLPDGTVQWYGCGKNT 317

Query: 536 PRCFPT-VKGKPXYVYSDKHTPPCCLRNMREVTKHVLDVLEQA 661
            RCF T V   P Y+Y+++ TPPCCL ++RE  +HV +VL+ +
Sbjct: 318 KRCFGTIVDDMPAYLYNNQWTPPCCLEHLRESARHVFEVLDNS 360


>SB_12744| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 613

 Score = 35.1 bits (77), Expect = 0.055
 Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 3/146 (2%)
 Frame = +2

Query: 227 ICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTFGPGRKVLKT 406
           +CD +TGP   L KT    K      L     +Y   ++++       HT   G  V+ +
Sbjct: 329 VCDYLTGP--FLAKTGVFKKFSLDARLN--NGVYRDLFLRVKSK--FSHTTRRGPTVV-S 381

Query: 407 LPEKQIVA---EKVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDTPRCFPTVKGKPXYV 577
            P+        E+       F  K+ ++ +V  DG V  YGC +       T    P  V
Sbjct: 382 CPDVMFHTRSLERTDADLLPFANKHSIRKIVELDGRVRWYGCRRGV--IHRTADKCP--V 437

Query: 578 YSDKHTPPCCLRNMREVTKHVLDVLE 655
                 PPCCL N+ +  K ++   E
Sbjct: 438 REGLLVPPCCLENLADAVKFLMSQCE 463


>SB_58701| Best HMM Match : bZIP_2 (HMM E-Value=1.6)
          Length = 940

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
 Frame = +2

Query: 146 FHEIKCQRICWNYRDWTLKYTKDSTGTICD---AVTGPHALLIKTEYLSKVPDPIALPFP 316
           FHE+        YR+   K    +T  +     + T P  L + TE L+  P P ALP  
Sbjct: 402 FHEVVFSSGHHQYREDFKKKCSYATNCVTSPQGSPTSPSLLSVSTESLTSFPAPTALPAS 461

Query: 317 ESLYLQTYVKMAKV--QVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRSTFYKKYKMKIVV 490
            S   Q    M+ V  QV      P       LP      E ++E   T    +K  I+V
Sbjct: 462 VSQTAQVIESMSHVASQVSRDWPSPTSNAC-LLPSPSEKEEGIQEVSLTKASVHKKFIIV 520

Query: 491 GE 496
            E
Sbjct: 521 SE 522


>SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0)
          Length = 284

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 128 IAIGIGFHEIKCQRICWNYRDWTLKYTKDSTGTIC 232
           +A+ +   ++K      N  DW +KY KDS   IC
Sbjct: 248 VALSVRLRDVKPTENDQNAGDWVVKYRKDSPALIC 282


>SB_17382| Best HMM Match : Gpi1 (HMM E-Value=2.6)
          Length = 280

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = -3

Query: 488 QQSSFYISYRMSTSALSLFQQLFVFLAMFLRLYVPVQ 378
           Q  S Y+S R   ++L+ FQ+ F+ + M LRL VP Q
Sbjct: 68  QHVSPYVSRRSDLTSLNSFQE-FIIVLMKLRLNVPFQ 103


>SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26)
          Length = 370

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 398 LKTLPEKQIVAEKVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDTPRCFPTVKGK 565
           LK+  +K IV    +E+   F     +   +GE G+  E      TPR   T+K K
Sbjct: 153 LKSNHQKYIVLASGRERTKVFVNNVGLVSTIGEGGSFGELALIYGTPRA-ATIKAK 207


>SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035)
          Length = 330

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
 Frame = +2

Query: 113 NPLHVIAIGIGFHE-IKCQRICWNYRDWTLKYTKDST-GTICDAVTGPHALLIKTEYLSK 286
           NP  +I IGIG H+ +  QR   N+ +  L+  +D+    I    T     +   E+  K
Sbjct: 11  NPGRIIVIGIGLHDGLSAQRTIDNFLEPILQLVEDADWPKILWVTTHAQGFVKPLEFRRK 70

Query: 287 VPDPIALPFPESLYLQTYVKMAKVQV 364
             +   L F E ++   Y+K   + V
Sbjct: 71  QGNHRVLAFNEKIH--RYLKKRNIPV 94


>SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35)
          Length = 1772

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 347  MAKVQVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRSTFYKKY 472
            +A  Q++YH  GP  K L T   KQ++ E      + + ++Y
Sbjct: 1424 IAGTQLIYHGTGPSTKNLTTEQAKQVLNENELGTMTYYIREY 1465


>SB_18060| Best HMM Match : Pepsin-I3 (HMM E-Value=0.67)
          Length = 328

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = -2

Query: 354 LAIFTYVCKYNDSGNGN----AIGSGTFDRYSVLINSACGPVTASHIVPVESLVY 202
           L  F YVC  ++         A+G G FD+YSV      G V    +VP+ + VY
Sbjct: 183 LTSFVYVCVCHEVNKWAKAVMAVGRGFFDQYSVF--CVFGSVVGCVVVPLITQVY 235


>SB_18338| Best HMM Match : MFS_1 (HMM E-Value=0.038)
          Length = 451

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 325 IFADICEDGQGTSTLSYIWTG 387
           IFAD+    +GT   S+IW G
Sbjct: 119 IFADVMHSNKGTKARSHIWNG 139


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,968,620
Number of Sequences: 59808
Number of extensions: 508407
Number of successful extensions: 1437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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