BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0765 (700 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_55837| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31 SB_12744| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.055 SB_58701| Best HMM Match : bZIP_2 (HMM E-Value=1.6) 31 1.2 SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0) 30 1.6 SB_17382| Best HMM Match : Gpi1 (HMM E-Value=2.6) 29 3.6 SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26) 28 6.3 SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035) 28 6.3 SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) 28 8.4 SB_18060| Best HMM Match : Pepsin-I3 (HMM E-Value=0.67) 28 8.4 SB_18338| Best HMM Match : MFS_1 (HMM E-Value=0.038) 28 8.4 >SB_55837| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 455 Score = 132 bits (320), Expect = 2e-31 Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 11/223 (4%) Frame = +2 Query: 26 IETEYTLFVPDSVRVK-PRV---LHQAVIEANANPLHVIAIGI-GFHEIKCQRICWNYRD 190 I T Y +FVPD R+K P + + ++ E+ +IA+ + ++C + + + Sbjct: 138 ISTPYVIFVPDGSRLKSPNIFLFMLSSLKESEKTNSKIIAVPVENRFYVECHTLKVDLKK 197 Query: 191 WTLKYT--KDSTGT--ICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKV 358 WTL+Y K+ +G +CD+V+ A+++KT +L + P PFP+SL++Q + Sbjct: 198 WTLQYEMCKNKSGNFMLCDSVSQSVAVILKTAFLHSLSTPYMRPFPQSLFIQASIHHVHT 257 Query: 359 QVLYHTFGPGRKVLKTLPEKQIVAE-KVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDT 535 ++L+ + P R L T P + +KE+ YK++ +K V DGTV YGC K+T Sbjct: 258 KLLFKSSIPRRIELFTNPHNDWKHKHNMKERHIQMYKRFGIKKVDLPDGTVQWYGCGKNT 317 Query: 536 PRCFPT-VKGKPXYVYSDKHTPPCCLRNMREVTKHVLDVLEQA 661 RCF T V P Y+Y+++ TPPCCL ++RE +HV +VL+ + Sbjct: 318 KRCFGTIVDDMPAYLYNNQWTPPCCLEHLRESARHVFEVLDNS 360 >SB_12744| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 613 Score = 35.1 bits (77), Expect = 0.055 Identities = 37/146 (25%), Positives = 57/146 (39%), Gaps = 3/146 (2%) Frame = +2 Query: 227 ICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTFGPGRKVLKT 406 +CD +TGP L KT K L +Y ++++ HT G V+ + Sbjct: 329 VCDYLTGP--FLAKTGVFKKFSLDARLN--NGVYRDLFLRVKSK--FSHTTRRGPTVV-S 381 Query: 407 LPEKQIVA---EKVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDTPRCFPTVKGKPXYV 577 P+ E+ F K+ ++ +V DG V YGC + T P V Sbjct: 382 CPDVMFHTRSLERTDADLLPFANKHSIRKIVELDGRVRWYGCRRGV--IHRTADKCP--V 437 Query: 578 YSDKHTPPCCLRNMREVTKHVLDVLE 655 PPCCL N+ + K ++ E Sbjct: 438 REGLLVPPCCLENLADAVKFLMSQCE 463 >SB_58701| Best HMM Match : bZIP_2 (HMM E-Value=1.6) Length = 940 Score = 30.7 bits (66), Expect = 1.2 Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 5/122 (4%) Frame = +2 Query: 146 FHEIKCQRICWNYRDWTLKYTKDSTGTICD---AVTGPHALLIKTEYLSKVPDPIALPFP 316 FHE+ YR+ K +T + + T P L + TE L+ P P ALP Sbjct: 402 FHEVVFSSGHHQYREDFKKKCSYATNCVTSPQGSPTSPSLLSVSTESLTSFPAPTALPAS 461 Query: 317 ESLYLQTYVKMAKV--QVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRSTFYKKYKMKIVV 490 S Q M+ V QV P LP E ++E T +K I+V Sbjct: 462 VSQTAQVIESMSHVASQVSRDWPSPTSNAC-LLPSPSEKEEGIQEVSLTKASVHKKFIIV 520 Query: 491 GE 496 E Sbjct: 521 SE 522 >SB_17335| Best HMM Match : Enolase_C (HMM E-Value=0) Length = 284 Score = 30.3 bits (65), Expect = 1.6 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +2 Query: 128 IAIGIGFHEIKCQRICWNYRDWTLKYTKDSTGTIC 232 +A+ + ++K N DW +KY KDS IC Sbjct: 248 VALSVRLRDVKPTENDQNAGDWVVKYRKDSPALIC 282 >SB_17382| Best HMM Match : Gpi1 (HMM E-Value=2.6) Length = 280 Score = 29.1 bits (62), Expect = 3.6 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = -3 Query: 488 QQSSFYISYRMSTSALSLFQQLFVFLAMFLRLYVPVQ 378 Q S Y+S R ++L+ FQ+ F+ + M LRL VP Q Sbjct: 68 QHVSPYVSRRSDLTSLNSFQE-FIIVLMKLRLNVPFQ 103 >SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26) Length = 370 Score = 28.3 bits (60), Expect = 6.3 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = +2 Query: 398 LKTLPEKQIVAEKVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDTPRCFPTVKGK 565 LK+ +K IV +E+ F + +GE G+ E TPR T+K K Sbjct: 153 LKSNHQKYIVLASGRERTKVFVNNVGLVSTIGEGGSFGELALIYGTPRA-ATIKAK 207 >SB_45586| Best HMM Match : EGF_2 (HMM E-Value=0.00035) Length = 330 Score = 28.3 bits (60), Expect = 6.3 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Frame = +2 Query: 113 NPLHVIAIGIGFHE-IKCQRICWNYRDWTLKYTKDST-GTICDAVTGPHALLIKTEYLSK 286 NP +I IGIG H+ + QR N+ + L+ +D+ I T + E+ K Sbjct: 11 NPGRIIVIGIGLHDGLSAQRTIDNFLEPILQLVEDADWPKILWVTTHAQGFVKPLEFRRK 70 Query: 287 VPDPIALPFPESLYLQTYVKMAKVQV 364 + L F E ++ Y+K + V Sbjct: 71 QGNHRVLAFNEKIH--RYLKKRNIPV 94 >SB_24578| Best HMM Match : rve (HMM E-Value=4.8e-35) Length = 1772 Score = 27.9 bits (59), Expect = 8.4 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 347 MAKVQVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRSTFYKKY 472 +A Q++YH GP K L T KQ++ E + + ++Y Sbjct: 1424 IAGTQLIYHGTGPSTKNLTTEQAKQVLNENELGTMTYYIREY 1465 >SB_18060| Best HMM Match : Pepsin-I3 (HMM E-Value=0.67) Length = 328 Score = 27.9 bits (59), Expect = 8.4 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -2 Query: 354 LAIFTYVCKYNDSGNGN----AIGSGTFDRYSVLINSACGPVTASHIVPVESLVY 202 L F YVC ++ A+G G FD+YSV G V +VP+ + VY Sbjct: 183 LTSFVYVCVCHEVNKWAKAVMAVGRGFFDQYSVF--CVFGSVVGCVVVPLITQVY 235 >SB_18338| Best HMM Match : MFS_1 (HMM E-Value=0.038) Length = 451 Score = 27.9 bits (59), Expect = 8.4 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 325 IFADICEDGQGTSTLSYIWTG 387 IFAD+ +GT S+IW G Sbjct: 119 IFADVMHSNKGTKARSHIWNG 139 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,968,620 Number of Sequences: 59808 Number of extensions: 508407 Number of successful extensions: 1437 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1276 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1400 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1829596184 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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