Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0765
(700 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071018-1|AAL48640.1| 527|Drosophila melanogaster RE09574p pro... 66 4e-11
AE013599-3095|AAF46648.1| 572|Drosophila melanogaster CG15651-P... 66 4e-11
BT023373-1|AAY55789.1| 330|Drosophila melanogaster IP01934p pro... 32 0.86
BT023368-1|AAY55784.1| 330|Drosophila melanogaster IP01935p pro... 32 0.86
AE014296-1696|AAF50236.2| 421|Drosophila melanogaster CG14176-P... 32 0.86
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 30 3.5
AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p pro... 29 8.0
AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA... 29 8.0
>AY071018-1|AAL48640.1| 527|Drosophila melanogaster RE09574p
protein.
Length = 527
Score = 66.1 bits (154), Expect = 4e-11
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +2
Query: 161 CQRICWNYRDWTLKYTKDSTGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTY 340
C ++ + DWTL+ + CD HA+L+ L+ +P+P +LPFPE LY+Q
Sbjct: 221 CVKMNLDLPDWTLELVATNDTRRCDLFLQKHAILLDAAALAAMPEPFSLPFPEMLYMQAK 280
Query: 341 VKMAKVQVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRSTFYKKYKMKIVV 490
+ V F GR++ + KQ + + Q YKK ++K +V
Sbjct: 281 IANLSTTVFPQAFQEGRRLFASFHTKQRRMDLRRRQFREMYKKLQIKRIV 330
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 515 YGCAKDTPRCFPTVKG-KPXYVYSDKHTPPCCLRNMREVTKHVLDVLE 655
+GC + T C +V +P Y Y KHTPPCCL +R HVL+ E
Sbjct: 374 FGCERTTKSCIGSVYNERPYYSYLGKHTPPCCLDKLRTTFNHVLEEFE 421
>AE013599-3095|AAF46648.1| 572|Drosophila melanogaster CG15651-PA
protein.
Length = 572
Score = 66.1 bits (154), Expect = 4e-11
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +2
Query: 161 CQRICWNYRDWTLKYTKDSTGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTY 340
C ++ + DWTL+ + CD HA+L+ L+ +P+P +LPFPE LY+Q
Sbjct: 221 CVKMNLDLPDWTLELVATNDTRRCDLFLQKHAILLDAAALAAMPEPFSLPFPEMLYMQAK 280
Query: 341 VKMAKVQVLYHTFGPGRKVLKTLPEKQIVAEKVKEQRSTFYKKYKMKIVV 490
+ V F GR++ + KQ + + Q YKK ++K +V
Sbjct: 281 IANLSTTVFPQAFQEGRRLFASFHTKQRRMDLRRRQFREMYKKLQIKRIV 330
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 515 YGCAKDTPRCFPTVKG-KPXYVYSDKHTPPCCLRNMREVTKHVLDVLE 655
+GC + T C +V +P Y Y KHTPPCCL +R HVL+ E
Sbjct: 374 FGCERTTKSCIGSVYNERPYYSYLGKHTPPCCLDKLRTTFNHVLEEFE 421
>BT023373-1|AAY55789.1| 330|Drosophila melanogaster IP01934p
protein.
Length = 330
Score = 31.9 bits (69), Expect = 0.86
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Frame = -1
Query: 565 FAFDCWKTSRCIFSTSIFVYCS-IFSDNNLHFIFLIECRPLLFHFFSNYL-FFWQCF--- 401
F D + + S S+ + + + D + F F I C P+L++ Y + + C+
Sbjct: 32 FQLDLPRKKELLSSVSLILLNNWMIIDRQVMFFFKIVCMPVLYYCVRPYFQYIFDCYIKD 91
Query: 400 ---*DFTSRSKCMIEYLYLGHLHICLQI**FWKRQRNRIWHL*QIFSFN 263
+ T ++ YL LG+ + F+ Q +W +F FN
Sbjct: 92 KDTCEMTLTYPAIVPYLQLGNYEFPSYVIRFFLLQSGPLWCFFAVFGFN 140
>BT023368-1|AAY55784.1| 330|Drosophila melanogaster IP01935p
protein.
Length = 330
Score = 31.9 bits (69), Expect = 0.86
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Frame = -1
Query: 565 FAFDCWKTSRCIFSTSIFVYCS-IFSDNNLHFIFLIECRPLLFHFFSNYL-FFWQCF--- 401
F D + + S S+ + + + D + F F I C P+L++ Y + + C+
Sbjct: 32 FQLDLPRKKELLSSVSLILLNNWMIIDRQVMFFFKIVCMPVLYYCVRPYFQYIFDCYIKD 91
Query: 400 ---*DFTSRSKCMIEYLYLGHLHICLQI**FWKRQRNRIWHL*QIFSFN 263
+ T ++ YL LG+ + F+ Q +W +F FN
Sbjct: 92 KDTCEMTLTYPAIVPYLQLGNYEFPSYVIRFFLLQSGPLWCFFAVFGFN 140
>AE014296-1696|AAF50236.2| 421|Drosophila melanogaster CG14176-PB
protein.
Length = 421
Score = 31.9 bits (69), Expect = 0.86
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Frame = -1
Query: 565 FAFDCWKTSRCIFSTSIFVYCS-IFSDNNLHFIFLIECRPLLFHFFSNYL-FFWQCF--- 401
F D + + S S+ + + + D + F F I C P+L++ Y + + C+
Sbjct: 123 FQLDLPRKKELLSSVSLILLNNWMIIDRQVMFFFKIVCMPVLYYCVRPYFQYIFDCYIKD 182
Query: 400 ---*DFTSRSKCMIEYLYLGHLHICLQI**FWKRQRNRIWHL*QIFSFN 263
+ T ++ YL LG+ + F+ Q +W +F FN
Sbjct: 183 KDTCEMTLTYPAIVPYLQLGNYEFPSYVIRFFLLQSGPLWCFFAVFGFN 231
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 29.9 bits (64), Expect = 3.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 8 PLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA 106
P+ P ++E YT FVPD ++ P V + VI A
Sbjct: 556 PIHPESVE--YTAFVPDGLKNAPSVFQRTVINA 586
>AY058609-1|AAL13838.1| 1392|Drosophila melanogaster LD30178p protein.
Length = 1392
Score = 28.7 bits (61), Expect = 8.0
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 215 STGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTF 379
S+GT+ + ++ ++ L+ +P + P P S +L V+ +K+ VL F
Sbjct: 1048 SSGTLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSSHLSLNVEGSKITVLVPQF 1102
>AE014297-4494|AAF56980.2| 1392|Drosophila melanogaster CG7896-PA
protein.
Length = 1392
Score = 28.7 bits (61), Expect = 8.0
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 215 STGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESLYLQTYVKMAKVQVLYHTF 379
S+GT+ + ++ ++ L+ +P + P P S +L V+ +K+ VL F
Sbjct: 1048 SSGTLAGLKSNDLSVQLRNTSLNALPPALLFPVPRSSHLSLNVEGSKITVLVPQF 1102
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,886,041
Number of Sequences: 53049
Number of extensions: 749250
Number of successful extensions: 2014
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2014
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -