Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0764
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   4.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.2  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    21   8.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 140 GLTAGRTSCESARVGTTF 193
           G+T  R S + A VGT F
Sbjct: 295 GITVHRNSAQQAGVGTIF 312


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 140 GLTAGRTSCESARVGTTF 193
           G+T  R S + A VGT F
Sbjct: 295 GITVHRNSAQQAGVGTIF 312


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -3

Query: 436 PAGWXWSSGVFRDTSGTV 383
           PAGW W    F    G V
Sbjct: 162 PAGWIWGDQGFLKKLGAV 179


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 411 GYSGTPAAPXGRPDGLPYR 355
           G+ G    P G+ +G+P++
Sbjct: 599 GFPGRLLLPRGKKEGMPFQ 617


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 417 PAGYSGTPAAPXGRPDGLPY 358
           P G+      P G+ +G+PY
Sbjct: 595 PYGFPERLLLPKGKKEGMPY 614


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 411 GYSGTPAAPXGRPDGLPYR 355
           G+ G    P G+ +G+P++
Sbjct: 599 GFPGRLLLPRGKKEGMPFQ 617


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 417 PAGYSGTPAAPXGRPDGLPY 358
           P G+      P G+ +G+PY
Sbjct: 595 PYGFPERLLLPKGKKEGMPY 614


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 13  F*ANYLSNLDNSTTDSHSDDIYP 81
           F  NY++N + S   SH +   P
Sbjct: 38  FDGNYINNFETSNGISHQESGQP 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,452
Number of Sequences: 438
Number of extensions: 2759
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)