Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0763
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   444   e-127
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   440   e-126
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   349   2e-98
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.0  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  444 bits (1093), Expect = e-127
 Identities = 189/220 (85%), Positives = 207/220 (94%)
 Frame = +1

Query: 31  KXESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQMVTITFNGA 210
           K ESDEN+CTVE DPNRAPDCDP QCVLPDCFCSADGTRIPG +EP  VPQM+T+TFNGA
Sbjct: 142 KDESDENSCTVETDPNRAPDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMITLTFNGA 201

Query: 211 VNVDNIDLYEQIFNGNRHNPNGCQIKGTFFVSHKYTNYAAVQELHRKGHEISVFSITHKD 390
           VN+DNIDLYE+IFNGNR NPNGCQI+GTFFVSHKYTNY+AVQ+LHR+GHEI+VFS+THK+
Sbjct: 202 VNIDNIDLYEEIFNGNRANPNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKE 261

Query: 391 DPQYWTSGSYDDWLAEMAGARLIIERYANITDSSIIGVRAPYLRVGGNKQFEMMGDQYFV 570
           DP YW+ GSYDDWLAEMAGARLI+ER+ANITD SIIGVRAPYLRVGGNKQFEMM DQ+FV
Sbjct: 262 DPNYWSQGSYDDWLAEMAGARLIVERFANITDGSIIGVRAPYLRVGGNKQFEMMADQFFV 321

Query: 571 YDASITAPLGRVPIWPYTLYFRMPHKCNGNAHNCPXKSHP 690
           YDASITA LGRVPIWPYTLYFRMPHKCNGNAHNCP +SHP
Sbjct: 322 YDASITASLGRVPIWPYTLYFRMPHKCNGNAHNCPSRSHP 361



 Score = 32.3 bits (70), Expect = 0.004
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 681 KSPPFGXMVMNELDXRDXPXFDE 749
           +S P   +VMNELD RD P FDE
Sbjct: 358 RSHPVWEIVMNELDRRDDPTFDE 380



 Score = 29.5 bits (63), Expect = 0.030
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   LFCNGKPDCK 32
           LFCNGKPDCK
Sbjct: 133 LFCNGKPDCK 142


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  440 bits (1084), Expect = e-126
 Identities = 189/220 (85%), Positives = 206/220 (93%)
 Frame = +1

Query: 31  KXESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQMVTITFNGA 210
           K ESDEN+CTVE DPNRA DCDP QCVLPDCFCSADGTRIPG +EP  VPQM+T+TFNGA
Sbjct: 135 KDESDENSCTVETDPNRALDCDPTQCVLPDCFCSADGTRIPGQLEPANVPQMITLTFNGA 194

Query: 211 VNVDNIDLYEQIFNGNRHNPNGCQIKGTFFVSHKYTNYAAVQELHRKGHEISVFSITHKD 390
           VNVDNIDLYE+IFNGNR NPNGCQI+GTFFVSHKYTNY+AVQ+LHR+GHEI+VFS+THK+
Sbjct: 195 VNVDNIDLYEEIFNGNRANPNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVFSLTHKE 254

Query: 391 DPQYWTSGSYDDWLAEMAGARLIIERYANITDSSIIGVRAPYLRVGGNKQFEMMGDQYFV 570
           DP YW+ GSYDDWLAEMAGARLI+ER+ANITD SIIGVRAPYLRVGGNKQFEMM DQ+FV
Sbjct: 255 DPNYWSQGSYDDWLAEMAGARLIVERFANITDGSIIGVRAPYLRVGGNKQFEMMADQFFV 314

Query: 571 YDASITAPLGRVPIWPYTLYFRMPHKCNGNAHNCPXKSHP 690
           YDASITA LGRVPIWPYTLYFRMPHKCNGNAHNCP +SHP
Sbjct: 315 YDASITASLGRVPIWPYTLYFRMPHKCNGNAHNCPSRSHP 354



 Score = 32.3 bits (70), Expect = 0.004
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 681 KSPPFGXMVMNELDXRDXPXFDE 749
           +S P   +VMNELD RD P FDE
Sbjct: 351 RSHPVWEIVMNELDRRDDPTFDE 373



 Score = 29.5 bits (63), Expect = 0.030
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   LFCNGKPDCK 32
           LFCNGKPDCK
Sbjct: 126 LFCNGKPDCK 135


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  349 bits (857), Expect = 2e-98
 Identities = 143/216 (66%), Positives = 178/216 (82%)
 Frame = +1

Query: 40  SDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPGGIEPNQVPQMVTITFNGAVNV 219
           SDEN C ++ DPNRAP CDP  CVLPDCFCS DGT IPG +    VPQM+TITF+ A+N 
Sbjct: 146 SDENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTTIPGDLPSKDVPQMITITFDDAINN 205

Query: 220 DNIDLYEQIFNGNRHNPNGCQIKGTFFVSHKYTNYAAVQELHRKGHEISVFSITHKDDPQ 399
           +NI+LY++IFNG R NPNGC IK TFFVSHKYTNY+AVQE+HRKGHEI+V SITH DD +
Sbjct: 206 NNIELYKEIFNGKRKNPNGCDIKATFFVSHKYTNYSAVQEMHRKGHEIAVHSITHNDDER 265

Query: 400 YWTSGSYDDWLAEMAGARLIIERYANITDSSIIGVRAPYLRVGGNKQFEMMGDQYFVYDA 579
           +W++ + DDW  EMAG R+I E++AN+TD+S++GVRAPYLRVGGN QF MM +Q F+YD+
Sbjct: 266 FWSNATVDDWAKEMAGMRIIAEKFANLTDNSVVGVRAPYLRVGGNNQFTMMEEQAFLYDS 325

Query: 580 SITAPLGRVPIWPYTLYFRMPHKCNGNAHNCPXKSH 687
           +ITAPL   P+WPYT+YFRMPH+C+GN  +CP +SH
Sbjct: 326 TITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSH 361



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 702 MVMNELDXRDXPXFDE 749
           MV+NELD R+ P  DE
Sbjct: 366 MVLNELDRREDPTNDE 381



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 3   LFCNGKPDC 29
           LFCNG+ DC
Sbjct: 134 LFCNGEKDC 142


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = -1

Query: 516 VRRPNSNYRRVSDICVTFNDKTSSGHFSQPIIVRTTRPVLRIIFMSYG--KYRNF--MSF 349
           +RR   NY  + ++   FN+          I+V T    L  +F+ YG  K RN   +SF
Sbjct: 219 LRRVRKNYNSICELVDAFNNIYGLAMLEIIIVVITYVLNLTDLFLVYGMSKSRNIEGVSF 278

Query: 348 AV*FLYSCIVSI 313
               +  C + I
Sbjct: 279 GTNLVILCALWI 290


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 67  VRQCKHFHRIHXLQSGL 17
           V+QC H  +I+  QSG+
Sbjct: 114 VKQCYHLQKINVQQSGI 130


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = +1

Query: 22  QTAKXESDENACTVELDPNRAPDCDPNQCVLPDCFCSADGTRIPG 156
           Q A+  S +N CT     N    C   +C    C  +    ++PG
Sbjct: 682 QEAQWTSSDNPCTTCFCENGNNKCFTMECPQVTCPDNMKLEKVPG 726


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 409 SSSIADHLYELWKIQKFHVLC 347
           S +I D L  +W + K  +LC
Sbjct: 3   SENITDVLKHVWFLSKLFLLC 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,470
Number of Sequences: 336
Number of extensions: 4266
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)