Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0762
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 37   FDNRLQNYISFFKSKGVGVINA 102
            FDN+    ++ +KSKG+ V+ A
Sbjct: 1878 FDNKFYEKVTAYKSKGIKVLVA 1899


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 333 CIHNLDSVVQLIQVEETTNVCVY 265
           CI N +    +I   E TN+C +
Sbjct: 440 CIKNREGFEMVIAEPEYTNICFW 462


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 458 FDNSLSLFLYNGSSTLSQCNVSLSKN 381
           F+ S S +LY  SST+   N S   N
Sbjct: 29  FNISTSNYLYTPSSTIDLYNTSSVSN 54


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 458 FDNSLSLFLYNGSSTLSQCNVSLSKN 381
           F+ S S +LY  SST+   N S   N
Sbjct: 29  FNISTSNYLYTPSSTIDLYNTSSVSN 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,879
Number of Sequences: 336
Number of extensions: 3380
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)