Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0762
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023035-1|AAY55451.1| 345|Drosophila melanogaster IP11040p pro... 128 1e-29
AE014297-1419|AAF54729.1| 345|Drosophila melanogaster CG18547-P... 128 1e-29
AY118797-1|AAM50657.1| 342|Drosophila melanogaster GH17980p pro... 107 2e-23
AE014297-1421|AAF54731.1| 342|Drosophila melanogaster CG3397-PA... 107 2e-23
AE014297-1420|AAF54730.1| 294|Drosophila melanogaster CG12224-P... 100 2e-21
Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma pigm... 29 5.1
AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p pro... 29 5.1
AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like pro... 29 5.1
AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA... 29 5.1
AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC... 29 5.1
>BT023035-1|AAY55451.1| 345|Drosophila melanogaster IP11040p
protein.
Length = 345
Score = 128 bits (308), Expect = 1e-29
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Frame = +1
Query: 1 ISTILSYSKSTLFDNRLQNYISFFKSKGVGVINAAATGMGLLTNKGPQPWHPASDDIKAI 180
+ T+L+Y++ TL D L Y+ FFKS+ +GVI AAA +GLLTN GPQPWHPASD+ KAI
Sbjct: 195 LDTVLTYARYTLTDETLLEYLDFFKSQNLGVICAAAHALGLLTNAGPQPWHPASDEQKAI 254
Query: 181 CRRASDYCKERKVELARLATWFTLN-QPGIDTNICGFFNLDQLYDTVEVMDTGLSEHESR 357
R+AS+ CKER VEL +LA ++T++ P + T + G L ++ + GLS+ E
Sbjct: 255 ARKASEVCKERGVELGKLAMYYTMSGLPEVSTFLTGMQTRQLLRINLDANEVGLSDKEQE 314
Query: 358 ILSQVQARFFDKDTLHWDNVELPLY 432
+L ++ K W+ EL +Y
Sbjct: 315 VLRYLKENVLTK-PFDWEGNELEIY 338
>AE014297-1419|AAF54729.1| 345|Drosophila melanogaster CG18547-PA
protein.
Length = 345
Score = 128 bits (308), Expect = 1e-29
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Frame = +1
Query: 1 ISTILSYSKSTLFDNRLQNYISFFKSKGVGVINAAATGMGLLTNKGPQPWHPASDDIKAI 180
+ T+L+Y++ TL D L Y+ FFKS+ +GVI AAA +GLLTN GPQPWHPASD+ KAI
Sbjct: 195 LDTVLTYARYTLTDETLLEYLDFFKSQNLGVICAAAHALGLLTNAGPQPWHPASDEQKAI 254
Query: 181 CRRASDYCKERKVELARLATWFTLN-QPGIDTNICGFFNLDQLYDTVEVMDTGLSEHESR 357
R+AS+ CKER VEL +LA ++T++ P + T + G L ++ + GLS+ E
Sbjct: 255 ARKASEVCKERGVELGKLAMYYTMSGLPEVSTFLTGMQTRQLLRINLDANEVGLSDKEQE 314
Query: 358 ILSQVQARFFDKDTLHWDNVELPLY 432
+L ++ K W+ EL +Y
Sbjct: 315 VLRYLKENVLTK-PFDWEGNELEIY 338
>AY118797-1|AAM50657.1| 342|Drosophila melanogaster GH17980p
protein.
Length = 342
Score = 107 bits (257), Expect = 2e-23
Identities = 49/131 (37%), Positives = 79/131 (60%)
Frame = +1
Query: 1 ISTILSYSKSTLFDNRLQNYISFFKSKGVGVINAAATGMGLLTNKGPQPWHPASDDIKAI 180
I +L+Y++ TL DN L ++ F+ GVGV+ AAA +GLL+N GPQ WHP S ++ A+
Sbjct: 197 IQVVLNYARYTLLDNTLLRHMKAFQEMGVGVVCAAAHSLGLLSNAGPQSWHPGSPELLAV 256
Query: 181 CRRASDYCKERKVELARLATWFTLNQPGIDTNICGFFNLDQLYDTVEVMDTGLSEHESRI 360
+R ++ C++R VEL +LA ++T+ G T + G N L ++ + GL+ HE +
Sbjct: 257 GKRGAEICQKRNVELGKLAMYYTMQLDGAATFLIGIPNRKLLRINLDAIFDGLTSHEQEV 316
Query: 361 LSQVQARFFDK 393
L ++ F K
Sbjct: 317 LQYLRENVFTK 327
>AE014297-1421|AAF54731.1| 342|Drosophila melanogaster CG3397-PA
protein.
Length = 342
Score = 107 bits (257), Expect = 2e-23
Identities = 49/131 (37%), Positives = 79/131 (60%)
Frame = +1
Query: 1 ISTILSYSKSTLFDNRLQNYISFFKSKGVGVINAAATGMGLLTNKGPQPWHPASDDIKAI 180
I +L+Y++ TL DN L ++ F+ GVGV+ AAA +GLL+N GPQ WHP S ++ A+
Sbjct: 197 IQVVLNYARYTLLDNTLLRHMKAFQEMGVGVVCAAAHSLGLLSNAGPQSWHPGSPELLAV 256
Query: 181 CRRASDYCKERKVELARLATWFTLNQPGIDTNICGFFNLDQLYDTVEVMDTGLSEHESRI 360
+R ++ C++R VEL +LA ++T+ G T + G N L ++ + GL+ HE +
Sbjct: 257 GKRGAEICQKRNVELGKLAMYYTMQLDGAATFLIGIPNRKLLRINLDAIFDGLTSHEQEV 316
Query: 361 LSQVQARFFDK 393
L ++ F K
Sbjct: 317 LQYLRENVFTK 327
>AE014297-1420|AAF54730.1| 294|Drosophila melanogaster CG12224-PA
protein.
Length = 294
Score = 100 bits (240), Expect = 2e-21
Identities = 47/127 (37%), Positives = 75/127 (59%)
Frame = +1
Query: 1 ISTILSYSKSTLFDNRLQNYISFFKSKGVGVINAAATGMGLLTNKGPQPWHPASDDIKAI 180
I +L+Y++ TL DN L Y+ F+ GVGV+ AAA +GLL N GP HP S +I A+
Sbjct: 168 IQVVLNYARYTLLDNTLLRYMKDFQKMGVGVVCAAAHSLGLLRNAGPHASHPGSQEILAV 227
Query: 181 CRRASDYCKERKVELARLATWFTLNQPGIDTNICGFFNLDQLYDTVEVMDTGLSEHESRI 360
+R ++ C++R VEL +LA ++T+ G T + G N L ++ + GL+ HE +
Sbjct: 228 AKRGAEICQQRNVELGKLAMYYTMQLDGAATFLIGIPNRKLLRINLDAIFDGLTSHEQEV 287
Query: 361 LSQVQAR 381
L ++ +
Sbjct: 288 LQYLREK 294
>Z28622-1|CAA82262.1| 1293|Drosophila melanogaster xeroderma
pigmentosum group Ccomplementing factor protein.
Length = 1293
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 73 KSKGVGVINAAATGMG----LLTNKGPQPWHPASDDIKAICRRASDYCKERKVELAR 231
K + + A A GMG L+ N P P PA+ D+ I R D K + VE R
Sbjct: 479 KQDMIFIFIALARGMGMHCRLIVNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESER 535
>AY070566-1|AAL48037.1| 1293|Drosophila melanogaster LD47533p
protein.
Length = 1293
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 73 KSKGVGVINAAATGMG----LLTNKGPQPWHPASDDIKAICRRASDYCKERKVELAR 231
K + + A A GMG L+ N P P PA+ D+ I R D K + VE R
Sbjct: 479 KQDMIFIFIALARGMGMHCRLIVNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESER 535
>AF209743-1|AAF24766.1| 1293|Drosophila melanogaster XPC-like
protein isoform a protein.
Length = 1293
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 73 KSKGVGVINAAATGMG----LLTNKGPQPWHPASDDIKAICRRASDYCKERKVELAR 231
K + + A A GMG L+ N P P PA+ D+ I R D K + VE R
Sbjct: 479 KQDMIFIFIALARGMGMHCRLIVNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESER 535
>AE013599-2037|AAF58150.1| 1293|Drosophila melanogaster CG8153-PA,
isoform A protein.
Length = 1293
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 73 KSKGVGVINAAATGMG----LLTNKGPQPWHPASDDIKAICRRASDYCKERKVELAR 231
K + + A A GMG L+ N P P PA+ D+ I R D K + VE R
Sbjct: 479 KQDMIFIFIALARGMGMHCRLIVNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESER 535
>AE013599-2036|AAM68530.1| 1294|Drosophila melanogaster CG8153-PC,
isoform C protein.
Length = 1294
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +1
Query: 73 KSKGVGVINAAATGMG----LLTNKGPQPWHPASDDIKAICRRASDYCKERKVELAR 231
K + + A A GMG L+ N P P PA+ D+ I R D K + VE R
Sbjct: 480 KQDMIFIFIALARGMGMHCRLIVNLQPMPLRPAASDLIPIKLRPDDKNKSQTVESER 536
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,970,857
Number of Sequences: 53049
Number of extensions: 561780
Number of successful extensions: 1549
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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