Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0762
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory...    97   1e-20
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p...    31   0.66 
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    31   0.66 
Z72507-13|CAH60789.1|  515|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z72507-10|CAA96629.1|  531|Caenorhabditis elegans Hypothetical p...    28   8.1  

>U00033-13|AAC48300.1|  439|Caenorhabditis elegans Mechanosensory
           abnormality protein14 protein.
          Length = 439

 Score = 97.1 bits (231), Expect = 1e-20
 Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
 Frame = +1

Query: 76  SKGVGVINAAATGMGLLTNKGPQPWHPASDDIKAICRRASDYCKERKVELARLATWFTLN 255
           ++ + VIN+ A   GLLT KGP PWHPASD+IK  C  A+ YC  + + +++LA  + LN
Sbjct: 269 TRNIAVINSGALCWGLLTEKGPPPWHPASDEIKEACLAATTYCSSKNISISKLALDYALN 328

Query: 256 QPGIDTNICGFFNLDQLYDTVEVMD-TGLSEHESRILSQVQARFFDK-DTLHWDNVELPL 429
            P +   + G  ++ Q+ D +E+ + + +++ E R+  ++  R+ D+ +   W+ V++  
Sbjct: 329 FPNVICCLVGMDSVQQVLDNLELSNFSRITDVEQRVRDRIMRRYLDRLENAGWEGVDVAQ 388

Query: 430 YKNKLNEL 453
           Y  KL +L
Sbjct: 389 YWKKLKKL 396


>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
            protein ZK328.7b protein.
          Length = 1098

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +1

Query: 103  AATGMGLLTNKGPQPWHPASDDIKAICRRASDYCKERKVELARLATWFTLNQPGIDTNIC 282
            A+T    L N  PQ WH  S  ++  CR       E+ ++ A+      + + G   N+C
Sbjct: 981  ASTSYTTLLNTNPQHWHALSRVVELFCRNGEQNAAEKHLDRAKEVNPRCVTESGY--NVC 1038


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
            ZK328.7a protein.
          Length = 1332

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = +1

Query: 103  AATGMGLLTNKGPQPWHPASDDIKAICRRASDYCKERKVELARLATWFTLNQPGIDTNIC 282
            A+T    L N  PQ WH  S  ++  CR       E+ ++ A+      + + G   N+C
Sbjct: 981  ASTSYTTLLNTNPQHWHALSRVVELFCRNGEQNAAEKHLDRAKEVNPRCVTESGY--NVC 1038


>Z72507-13|CAH60789.1|  515|Caenorhabditis elegans Hypothetical
           protein F17C11.7b protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 320 RLW-IQDSLSTSLGS*VKCKRGSSTKIHYIGTT 415
           R W + D     LGS  +CK   S+KIH IGTT
Sbjct: 225 RHWSLADVFERKLGS--QCKVARSSKIHVIGTT 255


>Z72507-10|CAA96629.1|  531|Caenorhabditis elegans Hypothetical
           protein F17C11.7a protein.
          Length = 531

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 320 RLW-IQDSLSTSLGS*VKCKRGSSTKIHYIGTT 415
           R W + D     LGS  +CK   S+KIH IGTT
Sbjct: 241 RHWSLADVFERKLGS--QCKVARSSKIHVIGTT 271


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,198,186
Number of Sequences: 27780
Number of extensions: 295048
Number of successful extensions: 764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)