Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0761
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 334 3e-92
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 334 5e-92
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 332 2e-91
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 319 1e-87
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 194 4e-50
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 166 1e-41
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 155 4e-38
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 155 4e-38
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 6e-38
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 154 8e-38
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 1e-37
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 1e-37
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 153 1e-37
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 151 4e-37
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 7e-37
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 9e-37
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 149 3e-36
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 5e-35
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 139 2e-33
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 137 9e-33
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 99 3e-21
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 87 1e-17
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 80 2e-15
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 61 1e-09
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 61 1e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 56 2e-08
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 54 1e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 31 0.90
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 31 0.90
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 1.2
SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25) 30 2.1
SB_10986| Best HMM Match : WD40 (HMM E-Value=0.026) 30 2.1
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.7
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 29 3.6
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 29 3.6
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_1283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 25 9.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 334 bits (822), Expect = 3e-92
Identities = 158/184 (85%), Positives = 160/184 (86%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC
Sbjct: 70 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNAD
Sbjct: 190 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 102 bits (245), Expect = 2e-22
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA NMM
Sbjct: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 334 bits (820), Expect = 5e-92
Identities = 157/184 (85%), Positives = 160/184 (86%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC
Sbjct: 15 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 74
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
+QGFQ KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSV
Sbjct: 75 IQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 134
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNAD
Sbjct: 135 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 194
Query: 544 LRKL 555
LRKL
Sbjct: 195 LRKL 198
Score = 98.7 bits (235), Expect = 4e-21
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVNMVPFPRL FFMPGFAPLTSRGSQQYRALTVPELTQQMFDA NMM
Sbjct: 198 LAVNMVPFPRLPFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 245
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 332 bits (816), Expect = 2e-91
Identities = 155/184 (84%), Positives = 160/184 (86%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAESCDC
Sbjct: 70 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAESCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
+QGFQ KIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSV
Sbjct: 130 IQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNAD
Sbjct: 190 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 102 bits (245), Expect = 2e-22
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDA NMM
Sbjct: 253 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 319 bits (784), Expect = 1e-87
Identities = 150/176 (85%), Positives = 152/176 (86%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC
Sbjct: 283 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 342
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSV
Sbjct: 343 LQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSV 402
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQ 531
HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQ
Sbjct: 403 HQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQ 458
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 194 bits (474), Expect = 4e-50
Identities = 90/152 (59%), Positives = 109/152 (71%)
Frame = +1
Query: 76 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 255
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 256 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 435
KIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ D CIDNEALY+IC+
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEALYNICYN 121
Query: 436 TLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQ 531
LK TPTY +LN L++ TMSGVTT LRFPGQ
Sbjct: 122 VLKRETPTYSELNSLIATTMSGVTTSLRFPGQ 153
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 166 bits (404), Expect = 1e-41
Identities = 86/158 (54%), Positives = 103/158 (65%), Gaps = 24/158 (15%)
Frame = +1
Query: 154 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 333
+RKEAE CD +QGFQ ++EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 334 VEPYNATLSVHQLVENTDET------------------------YCIDNEALYDICFRTL 441
VEPYNA LSVHQL+E TDE +CIDNEALYDIC++TL
Sbjct: 61 VEPYNAALSVHQLLETTDEVSEIVVEPYNAALSVHQLLETTDEVFCIDNEALYDICYKTL 120
Query: 442 KLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKL 555
KL+T TY DLNH++S TMSG+TTCLRFPGQLNADLRKL
Sbjct: 121 KLNTTTYSDLNHIISNTMSGLTTCLRFPGQLNADLRKL 158
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVNM+P+PRLHFFMPGFAPLTSR YRALTV +LTQ +FD N++
Sbjct: 158 LAVNMIPYPRLHFFMPGFAPLTSRECVSYRALTVADLTQAIFDNKNLL 205
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 155 bits (375), Expect = 4e-38
Identities = 73/181 (40%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 132 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 544 L 546
L
Sbjct: 252 L 252
Score = 154 bits (374), Expect = 6e-38
Identities = 72/181 (39%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 505 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQCTG 564
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 565 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 624
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 625 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 684
Query: 544 L 546
L
Sbjct: 685 L 685
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV E+T F+ N M
Sbjct: 691 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 735
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 155 bits (375), Expect = 4e-38
Identities = 72/181 (39%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C
Sbjct: 657 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTG 716
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 717 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 776
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 777 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 836
Query: 544 L 546
L
Sbjct: 837 L 837
Score = 153 bits (370), Expect = 2e-37
Identities = 71/181 (39%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK A+ C
Sbjct: 136 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 195
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P++S VVEPYN+ L+
Sbjct: 196 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTT 255
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 256 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVD 315
Query: 544 L 546
L
Sbjct: 316 L 316
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 322 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 366
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 843 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 887
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 154 bits (374), Expect = 6e-38
Identities = 70/181 (38%), Positives = 106/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK A+ C
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADGCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P++S VVEPYN+ L+
Sbjct: 132 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTT 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 544 L 546
L
Sbjct: 252 L 252
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV E+T F+ N M
Sbjct: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 302
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 154 bits (373), Expect = 8e-38
Identities = 71/181 (39%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 71 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQCTG 130
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P+VS VVEPYN+ L+
Sbjct: 131 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 190
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 191 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 250
Query: 544 L 546
L
Sbjct: 251 L 251
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV ++T F+ N M
Sbjct: 257 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQM 301
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 153 bits (372), Expect = 1e-37
Identities = 70/181 (38%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 876 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQCTG 935
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P++S VVEPYN+ L+
Sbjct: 936 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTT 995
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 996 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 1055
Query: 544 L 546
L
Sbjct: 1056 L 1056
Score = 152 bits (369), Expect = 2e-37
Identities = 71/181 (39%), Positives = 104/181 (57%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK A+ C
Sbjct: 443 PTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADGCTG 502
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P +S VVEPYN+ L+
Sbjct: 503 LQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTT 562
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+S +S +T LRF G LN D
Sbjct: 563 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQLVSSITASLRFDGALNVD 622
Query: 544 L 546
L
Sbjct: 623 L 623
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF M +AP+ S + LTV ++T F+ N M
Sbjct: 629 NLVPYPRIHFPMASYAPVVSAEKAYHEQLTVADITNSCFEPANQM 673
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV E+T F+ N M
Sbjct: 1062 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQM 1106
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 153 bits (371), Expect = 1e-37
Identities = 70/175 (40%), Positives = 104/175 (59%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 201
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 15 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 74
Query: 202 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 381
++ +Y + +++ P+P++S VVEPYN+ L+ H +E+
Sbjct: 75 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEH 134
Query: 382 TDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
+D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL
Sbjct: 135 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDL 189
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 195 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 239
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 153 bits (371), Expect = 1e-37
Identities = 70/175 (40%), Positives = 104/175 (59%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 201
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 202 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 381
++ +Y + +++ P+P++S VVEPYN+ L+ H +E+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEH 122
Query: 382 TDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
+D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL
Sbjct: 123 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFDGALNVDL 177
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 183 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 227
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 151 bits (367), Expect = 4e-37
Identities = 70/181 (38%), Positives = 104/181 (57%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK A+ C
Sbjct: 72 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P++S VVEPYN+ L+
Sbjct: 132 LQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTT 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 192 HTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQIVSSITASLRFDGALNVD 251
Query: 544 L 546
L
Sbjct: 252 L 252
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 258 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 302
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 151 bits (365), Expect = 7e-37
Identities = 69/181 (38%), Positives = 105/181 (58%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK A+ C
Sbjct: 57 PTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTG 116
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P++S VVEPYN+ L+
Sbjct: 117 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTT 176
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 177 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 236
Query: 544 L 546
L
Sbjct: 237 L 237
Score = 137 bits (331), Expect = 9e-33
Identities = 64/181 (35%), Positives = 103/181 (56%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P+ +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK A+ C
Sbjct: 490 PSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQCSG 549
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ P+P++S VVEPYN+ L+
Sbjct: 550 LQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTT 609
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ + + LR+ LN D
Sbjct: 610 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIDCVLHHCLSTLRW--ILNVD 667
Query: 544 L 546
L
Sbjct: 668 L 668
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF M +AP+ S + +TV +LT F+ N M
Sbjct: 674 NLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQM 718
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV E+T F+ N M
Sbjct: 243 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITTSCFEPANQM 287
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 150 bits (364), Expect = 9e-37
Identities = 70/181 (38%), Positives = 103/181 (56%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C
Sbjct: 37 PTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTG 96
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + ++V P+P++S VVEPYN+ LS
Sbjct: 97 LQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILST 156
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN D
Sbjct: 157 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 216
Query: 544 L 546
L
Sbjct: 217 L 217
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF M +AP+ S + +TV +LT F+ N M
Sbjct: 223 NLVPYPRIHFPMATYAPIISAEKAYHEMMTVSDLTNACFEPANQM 267
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 149 bits (360), Expect = 3e-36
Identities = 68/175 (38%), Positives = 102/175 (58%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQX 201
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 202 XXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVEN 381
++ +Y + ++V P+P++S VVEPYN+ L+ H +E+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEH 122
Query: 382 TDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
+D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL
Sbjct: 123 SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 177
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV E+T F+ N M
Sbjct: 183 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNSCFEPANQM 227
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 144 bits (350), Expect = 5e-35
Identities = 66/181 (36%), Positives = 102/181 (56%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK + C
Sbjct: 983 PTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQCSG 1042
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF + +Y + ++V P+P +S VVEPYN+ L+
Sbjct: 1043 LQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYNSVLTT 1102
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H +E++D T+ +DNEA+YD+C R L + P Y +LN L+ +S +T+ LRF G LN D
Sbjct: 1103 HTTLEHSDCTFMVDNEAIYDLCRRNLDVERPGYANLNRLIGQIVSSITSSLRFDGALNVD 1162
Query: 544 L 546
L
Sbjct: 1163 L 1163
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV ++T FD N M
Sbjct: 1169 NLVPYPRIHFPLVTYAPVISPEKAYHEQLTVAQITNMCFDPNNQM 1213
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 139 bits (337), Expect = 2e-33
Identities = 62/106 (58%), Positives = 74/106 (69%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P +VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKEAE+CDC
Sbjct: 26 PGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENCDC 85
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKV 321
+QG Q KIREEYPDRI++ +SVVPSPKV
Sbjct: 86 MQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 137 bits (331), Expect = 9e-33
Identities = 64/166 (38%), Positives = 95/166 (57%)
Frame = +1
Query: 55 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXX 234
P+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSG 138
Query: 235 XXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 414
++ +Y + ++V P+P ++ VVEPYN+ L+ H +E++D + +DNEA
Sbjct: 139 FSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEA 198
Query: 415 LYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRK 552
+YDIC R L + P+Y +LN L+ +S VT LRF G LN DL +
Sbjct: 199 IYDICRRNLDIERPSYTNLNRLIGQIVSSVTASLRFDGSLNVDLNE 244
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELT 667
N+VP+PR+HF + +AP+ S + LTV E+T
Sbjct: 248 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 282
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 103 bits (248), Expect = 1e-22
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = +1
Query: 160 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVE 339
K A+ C LQGF ++ +Y R ++V P+P++S VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 340 PYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLR 519
PYN+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S VT LR
Sbjct: 315 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSVTASLR 374
Query: 520 FPGQLNADL 546
F G LN DL
Sbjct: 375 FDGALNVDL 383
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ + ++V E+T F+ N M
Sbjct: 389 NLVPYPRIHFPLATYAPVIGADKAYHENMSVAEITSACFEPSNQM 433
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 99.1 bits (236), Expect = 3e-21
Identities = 46/127 (36%), Positives = 70/127 (55%)
Frame = +1
Query: 166 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPY 345
A+ C LQGF ++ +Y + +++ P+P++S VVEPY
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPY 60
Query: 346 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 525
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN L+ +S +T LRF
Sbjct: 61 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMGQIVSSITASLRFD 120
Query: 526 GQLNADL 546
G LN DL
Sbjct: 121 GALNVDL 127
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 87.4 bits (207), Expect = 1e-17
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Frame = +1
Query: 55 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXX 231
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGS 153
Query: 232 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 411
+R+ YP+ + +VV + + +V+ YNATL++ QL +++D ++N+
Sbjct: 154 GVGAFVTNSLRDFYPNSFI-VNNVVWPYSMGEVIVQNYNATLTLAQLYKSSDAIIIVEND 212
Query: 412 ALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRF--PGQLNADLRK 552
L IC + L L ++ D+N +VS + + ++ GQ +L K
Sbjct: 213 KLQKICSKLLNLKHISFRDINKVVSHKLGSMLQPMKLFRAGQSETELGK 261
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +2
Query: 566 MVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
MVPFPRLHFFMPGFAPL SR +QQY+ ++V ELTQQMFDA NMM
Sbjct: 1 MVPFPRLHFFMPGFAPLASRANQQYQNVSVEELTQQMFDARNMM 44
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 72.1 bits (169), Expect = 4e-13
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +1
Query: 310 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSL 489
S +SD VV+PYN+ L++ +L +N D +DN AL I L++ PT+ +N LVS
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVNQLVST 270
Query: 490 TMSGVTTCLRFPGQLNADL 546
M+ TT LR+PG +N DL
Sbjct: 271 IMATSTTTLRYPGYMNNDL 289
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTS 622
L +++P PRLHF M G+ PLT+
Sbjct: 292 LIASLIPTPRLHFLMTGYTPLTT 314
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 400 IDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
+DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 50
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + LTV ++T F+ N M
Sbjct: 56 NLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPANQM 100
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +1
Query: 400 IDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
+DNEA+YDIC R L + PTY +LN L+ +S +T LRF G LN DL
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDL 50
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ N M
Sbjct: 56 NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQM 100
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 162
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Frame = +1
Query: 19 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ 198
++ GP +F + SG GNNW + + + VV+ E C + +
Sbjct: 89 NILKGPLHDVFDCQQLITDVSGCGNNWYT-LLCKCFAIRKDIFVVVQSFKEWTLCFEAKE 147
Query: 199 XXXXXXXXXXXXXXXXXXXKI-REEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLV 375
+ ++YPD T +V PS D + PYN+ L++HQL
Sbjct: 148 MYLEDQNKGTGSGVGTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLT 206
Query: 376 ENTDETYCIDNEALYDIC 429
E+ D I+N+AL DIC
Sbjct: 207 EHADCVLPIENQALVDIC 224
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPL 616
+ +N+VPFP+LH+ + PL
Sbjct: 302 ITMNLVPFPKLHYLVSSQTPL 322
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 53.6 bits (123), Expect = 1e-07
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Frame = +1
Query: 52 RPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRKEAESCDCLQGFQXXXXXX 216
R N + G+ G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGTIVMHSLT 124
Query: 217 XXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDET 393
+ + YP + + SV SP VS ++ ++ YN+ LS+ L N D
Sbjct: 125 GGTGSGLGARLVETLSDAYP--LAHVMSVAVSPHVSGESPLQHYNSLLSLAALQRNADGI 182
Query: 394 YCIDN-EALYDICFRTLKLS--------TPTYGDLNHLVSLTMSGVTTCL-RFPGQLNAD 543
N + L + + +K+S + + D+N ++ ++ GV L P +
Sbjct: 183 LLFHNDDVLRQVMLQRVKISEHQVLSGGSVSLIDMNRSIAKSLVGVLQPLGEKPKSIKKT 242
Query: 544 LRKLGGQHG 570
+K+G + G
Sbjct: 243 SKKVGTRKG 251
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 162
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVF 72
P SVRSGPFGQIFRPDNFVF
Sbjct: 70 PGTMDSVRSGPFGQIFRPDNFVF 92
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 259 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 411
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 31.1 bits (67), Expect = 0.90
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 136 DSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 315
D+ D +R AE CD LQGFQ +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAH 278
Query: 316 -KVSD---TVVEPYNATLSVHQLVENTD 387
K +D V N LS Q+ E+ D
Sbjct: 279 FKDTDQEHNVKRILNMALSFSQITEHCD 306
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 31.1 bits (67), Expect = 0.90
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +1
Query: 136 DSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP 315
D+ D +R AE CD LQGFQ +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPAH 278
Query: 316 -KVSD---TVVEPYNATLSVHQLVENTD 387
K +D V N LS Q+ E+ D
Sbjct: 279 FKDTDQEHNVKRILNMALSFSQITEHCD 306
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 173 DSASFRTTSKTESTSSAPSV*CPLAQL 93
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25)
Length = 401
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -2
Query: 648 SARYCWLPRDVSGAKPGMKKCRRGKGTMLTAKLAQVGVQLSGEPQARRHAGHGQRH 481
S R+C+ P A+ G K C G L + VG + G H GHG H
Sbjct: 82 SPRHCYGPGCQHAARFGSKYCSDECGIQLAVRKNDVGDGVHGHGHGHGH-GHGHGH 136
>SB_10986| Best HMM Match : WD40 (HMM E-Value=0.026)
Length = 528
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +3
Query: 201 DTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSC-TIT*SVGHSSRTVQRHTFSSSIS* 377
DTL R H FRY +PP + H+ SC I ++ H +Q F+S +
Sbjct: 238 DTLGERSHIFRYENPPKSYITHKNT-TTTRHVLSCKAILLAMFHKKSRLQSTRFTSKNNS 296
Query: 378 KHRRNLLYRQRGSLRYLLP 434
+ + R L YL P
Sbjct: 297 RFQATNKLRNH-CLGYLCP 314
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 110 CPLAQLLPAPDCPKTKLSGRKICP 39
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 110 CPLAQLLPAPDCPKTKLSGRKICP 39
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 110 CPLAQLLPAPDCPKTKLSGRKICP 39
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 168 GIV*LPPGIPTDTLARRRHRFRYGHPPH 251
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -2
Query: 192 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADRVP 13
S++A R R +S V I +L V++L PV+ G +++D V + RSR R
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 12 WC 7
C
Sbjct: 264 RC 265
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 256 KIREEYPDRIMNTYSVVPSPKVS 324
K++E+YPD I++++ + P K S
Sbjct: 486 KLQEQYPDHILSSFELFPCEKAS 508
>SB_1283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 624 RDVSGAKPGMKKCRRGKGTMLTAKLAQVGVQLSGEPQARR 505
R +S PG + RR K T +AKLA + V G P+ RR
Sbjct: 50 RRLSWVTPGFSQSRRCK-TTASAKLACLQVDSRGSPKRRR 88
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -2
Query: 186 EAITRFRFLSNDV*N*IDELSTLRVVSLGPVVAGAGLSEDEVVRTEDLSERSRADR 19
E T R S ++ ++ELS ++ + + A G S DE+ R D + + +R
Sbjct: 589 EEATTLRVQSQELRASLEELSQVKTKEINTLRAELGKSRDEIARKNDREKNALRER 644
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 25.4 bits (53), Expect(2) = 9.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 406 NEALYDICFRTLKLSTPTYG 465
N L+++ + TL + TPTYG
Sbjct: 182 NPNLWNLTYGTLSIETPTYG 201
Score = 20.6 bits (41), Expect(2) = 9.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 451 TPTYGDLNH 477
TPTYG L H
Sbjct: 231 TPTYGTLTH 239
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,659,389
Number of Sequences: 59808
Number of extensions: 418517
Number of successful extensions: 1452
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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