BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0761
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 260 4e-71
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 260 4e-71
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 260 4e-71
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 260 4e-71
X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein... 28 0.25
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 26 0.99
Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like pr... 24 5.3
Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein. 24 5.3
AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14... 23 7.0
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 23 9.2
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 23 9.2
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 9.2
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 260 bits (636), Expect = 4e-71
Identities = 122/149 (81%), Positives = 127/149 (85%)
Frame = +1
Query: 109 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 288
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 289 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 468
NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+ P+YGD
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 469 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 555
LNHLVSLTMSGVTTCLRFPGQLNADLRKL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 149
Score = 88.2 bits (209), Expect = 2e-19
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 673
LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 149 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 188
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 260 bits (636), Expect = 4e-71
Identities = 122/149 (81%), Positives = 127/149 (85%)
Frame = +1
Query: 109 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 288
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 289 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 468
NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+ P+YGD
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 469 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 555
LNHLVSLTMSGVTTCLRFPGQLNADLRKL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 149
Score = 88.2 bits (209), Expect = 2e-19
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 673
LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 149 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 188
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 260 bits (636), Expect = 4e-71
Identities = 122/149 (81%), Positives = 127/149 (85%)
Frame = +1
Query: 109 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 288
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 289 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 468
NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+ P+YGD
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 469 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 555
LNHLVSLTMSGVTTCLRFPGQLNADLRKL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 149
Score = 88.2 bits (209), Expect = 2e-19
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 673
LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 149 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 188
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 260 bits (636), Expect = 4e-71
Identities = 122/149 (81%), Positives = 127/149 (85%)
Frame = +1
Query: 109 HYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIM 288
HYTEGAELVD+VLDVVRKE E+CDCLQGFQ KIREEYPDRIM
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 289 NTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGD 468
NTYSVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLK+ P+YGD
Sbjct: 61 NTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKVPNPSYGD 120
Query: 469 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 555
LNHLVSLTMSGVTTCLRFPGQLNADLRKL
Sbjct: 121 LNHLVSLTMSGVTTCLRFPGQLNADLRKL 149
Score = 88.2 bits (209), Expect = 2e-19
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 673
LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ
Sbjct: 149 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQ 188
>X87410-1|CAA60857.1| 498|Anopheles gambiae maltase-like protein
Agm1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 0.25
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 301 VVPSPKVSDTVVEPYNATLSVHQLVENTDETY 396
V P + S +P N T VHQ +N DET+
Sbjct: 236 VYPDEEKSGETDDPDNPTYLVHQHTQNLDETF 267
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 26.2 bits (55), Expect = 0.99
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Frame = +3
Query: 378 KHRRNL----LYRQRGSLRYL--LPHAKTIHTHIRRPEPPGVADHVRRDDVPAVPRTAER 539
+H R L LYRQR L +PH + + E + +RR ++ + RTA R
Sbjct: 1136 RHERRLYLQRLYRQRAREGTLPTVPHGRNRRSRSAPSEADTIRRRMRRREMERLRRTARR 1195
Query: 540 RPA 548
P+
Sbjct: 1196 VPS 1198
>Z32645-2|CAA83568.1| 259|Anopheles gambiae chymotrypsin-like
protease ANCHYM1 protein.
Length = 259
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 454 PTYGDLNHLVSLTMSGVTTC 513
P Y D+ HL +LT +G C
Sbjct: 189 PGYTDVGHLCTLTKTGEGAC 208
>Z18887-1|CAA79325.1| 259|Anopheles gambiae chymotrypsin 1 protein.
Length = 259
Score = 23.8 bits (49), Expect = 5.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 454 PTYGDLNHLVSLTMSGVTTC 513
P Y D+ HL +LT +G C
Sbjct: 189 PGYTDVGHLCTLTKTGEGAC 208
>AF117749-1|AAD38335.1| 372|Anopheles gambiae serine protease 14D2
protein.
Length = 372
Score = 23.4 bits (48), Expect = 7.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 70 FGQSGAGNNWAKGHYTEGAELVDSVLDVV 156
FG G + G YT +E +D VLD +
Sbjct: 343 FGLEQCGTDGVPGVYTRMSEYMDWVLDTM 371
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 23.0 bits (47), Expect = 9.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 146 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 33
K T + + CPL ++ DC +L KI KG
Sbjct: 195 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 232
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 23.0 bits (47), Expect = 9.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 146 KTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKG 33
K T + + CPL ++ DC +L KI KG
Sbjct: 196 KATGTKAHTAKYCPLKPVITPEDCLAMELRRHKIHRKG 233
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.0 bits (47), Expect = 9.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 93 VAGAGLSEDEVVRTEDLSERSRADRVPWCR 4
V+GA L+ D+ + + S A +VPW R
Sbjct: 710 VSGARLNVDKTIALDVGYTTSNAIQVPWLR 739
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,140
Number of Sequences: 2352
Number of extensions: 13743
Number of successful extensions: 66
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -