Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0761
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 307 6e-84
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 305 2e-83
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 305 2e-83
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 303 9e-83
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 302 2e-82
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 302 2e-82
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 302 2e-82
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 301 3e-82
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 301 4e-82
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 159 1e-39
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 159 1e-39
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 159 1e-39
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 159 1e-39
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 159 1e-39
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 159 1e-39
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 159 1e-39
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 116 2e-26
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 115 3e-26
At5g20860.1 68418.m02477 pectinesterase family protein contains ... 32 0.32
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.56
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 31 0.73
At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR... 31 0.73
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 29 2.2
At5g24010.1 68418.m02821 protein kinase family protein contains ... 29 3.0
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 29 3.0
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 3.0
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 3.9
At2g32780.1 68415.m04013 ubiquitin-specific protease 1, putative... 29 3.9
At1g45201.2 68414.m05185 lipase class 3 family protein Since thi... 29 3.9
At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ b... 27 9.0
At2g47830.2 68415.m05970 cation efflux family protein / metal to... 27 9.0
At2g47830.1 68415.m05969 cation efflux family protein / metal to... 27 9.0
At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C) 27 9.0
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 307 bits (753), Expect = 6e-84
Identities = 143/184 (77%), Positives = 153/184 (83%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDC
Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQYR LTVPELTQQM+DA NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMM 300
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 305 bits (749), Expect = 2e-83
Identities = 142/184 (77%), Positives = 153/184 (83%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDC
Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 95.5 bits (227), Expect = 3e-20
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DA NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 305 bits (749), Expect = 2e-83
Identities = 142/184 (77%), Positives = 152/184 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P S+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDC
Sbjct: 70 PGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPELTQQM+DA NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMM 300
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 303 bits (743), Expect = 9e-83
Identities = 140/184 (76%), Positives = 153/184 (83%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P SVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDC
Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 94.3 bits (224), Expect = 7e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+ NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 302 bits (741), Expect = 2e-82
Identities = 140/184 (76%), Positives = 152/184 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P S+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDC
Sbjct: 70 PGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPELTQQM+D+ NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 302 bits (741), Expect = 2e-82
Identities = 140/184 (76%), Positives = 152/184 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P S+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDC
Sbjct: 70 PGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQYR+LTVPELTQQM+D+ NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 302 bits (741), Expect = 2e-82
Identities = 141/184 (76%), Positives = 152/184 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P S+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDC
Sbjct: 71 PGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 130
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 131 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 190
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+D
Sbjct: 191 HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSD 250
Query: 544 LRKL 555
LRKL
Sbjct: 251 LRKL 254
Score = 89.8 bits (213), Expect = 1e-18
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPELTQQM+D+ NMM
Sbjct: 254 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMM 301
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 301 bits (739), Expect = 3e-82
Identities = 141/184 (76%), Positives = 151/184 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P S+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+ DC
Sbjct: 70 PGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDC 129
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 130 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSV 189
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+D
Sbjct: 190 HQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Query: 544 LRKL 555
LRKL
Sbjct: 250 LRKL 253
Score = 91.5 bits (217), Expect = 5e-19
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPELTQQM+DA NMM
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMM 300
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 301 bits (738), Expect = 4e-82
Identities = 140/184 (76%), Positives = 152/184 (82%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P S+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDC
Sbjct: 71 PGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 130
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGFQ KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSV
Sbjct: 131 LQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 190
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
HQLVEN DE +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT LRFPGQLN+D
Sbjct: 191 HQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSD 250
Query: 544 LRKL 555
LRKL
Sbjct: 251 LRKL 254
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
LAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPELTQQM+DA NMM
Sbjct: 254 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMM 301
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 76/181 (41%), Positives = 108/181 (59%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ PSP+VS VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D
Sbjct: 192 HSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVD 251
Query: 544 L 546
+
Sbjct: 252 I 252
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMM 302
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 76/181 (41%), Positives = 108/181 (59%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + +++ PSP+VS VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D
Sbjct: 192 HSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVD 251
Query: 544 L 546
+
Sbjct: 252 I 252
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMM 302
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 77/181 (42%), Positives = 109/181 (60%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + ++V PSP+VS +VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D
Sbjct: 192 HSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVD 251
Query: 544 L 546
+
Sbjct: 252 V 252
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 159 bits (387), Expect = 1e-39
Identities = 77/181 (42%), Positives = 109/181 (60%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + ++V PSP+VS +VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D
Sbjct: 192 HSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVD 251
Query: 544 L 546
+
Sbjct: 252 V 252
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 74/181 (40%), Positives = 110/181 (60%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ ++ + +++ PSP+VS VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S T+S +TT LRF G +N D
Sbjct: 192 HSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVD 251
Query: 544 L 546
+
Sbjct: 252 I 252
Score = 49.6 bits (113), Expect = 2e-06
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + +VPE+T +F+ NMM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMM 302
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 77/181 (42%), Positives = 109/181 (60%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + ++V PSP+VS +VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D
Sbjct: 192 HSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVD 251
Query: 544 L 546
+
Sbjct: 252 V 252
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 159 bits (387), Expect = 1e-39
Identities = 77/181 (42%), Positives = 109/181 (60%)
Frame = +1
Query: 4 PAPWXSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 183
P VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK A++C
Sbjct: 72 PTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTG 131
Query: 184 LQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSV 363
LQGF ++ +Y + ++V PSP+VS +VVEPYN+ LS
Sbjct: 132 LQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLST 191
Query: 364 HQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNAD 543
H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D
Sbjct: 192 HSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVD 251
Query: 544 L 546
+
Sbjct: 252 V 252
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 563 NMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAXNMM 697
N+VP+PR+HF + +AP+ S + L+V E+T F+ +MM
Sbjct: 258 NLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMM 302
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 116 bits (279), Expect = 2e-26
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 195
+++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF
Sbjct: 77 IQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Query: 196 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQL 372
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L
Sbjct: 136 VLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRL 195
Query: 373 VENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
N D +DN AL I L L+ PT+ N LVS MS TT LR+PG +N DL
Sbjct: 196 TLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELTQQMFDAXNMM 697
L +++P PR HF M G+ PLT R + R TV ++ +++ N+M
Sbjct: 256 LLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIM 304
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 115 bits (277), Expect = 3e-26
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 3/178 (1%)
Frame = +1
Query: 22 VRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 195
+++G + ++ +N GAGNNWA G Y +G + + ++D++ +EA+ D L+GF
Sbjct: 77 IQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
Query: 196 QXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQL 372
+ + Y +++ TYSV P+ + SD VV+PYN+ L++ +L
Sbjct: 136 VLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRL 195
Query: 373 VENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 546
N D +DN AL I L L+ PT+ N LVS MS TT LR+PG +N DL
Sbjct: 196 TLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 554 LAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELTQQMFDAXNMM 697
L +++P PR HF M G+ PLT R + R TV ++ +++ N+M
Sbjct: 256 LLASLIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIM 304
>At5g20860.1 68418.m02477 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 512
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 322 SDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLST 453
S+ ++ P ++++ +LV D TY + + ++ D C R +K+ST
Sbjct: 77 SNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMST 120
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.5 bits (68), Expect = 0.56
Identities = 23/71 (32%), Positives = 32/71 (45%)
Frame = +1
Query: 130 LVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 309
+++SV VVRKEAE+C+CLQ F RE D + Y V
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF--FVSGSFKVDSVEAKKKEENFRETLRDMANSKYEYVK 57
Query: 310 SPKVSDTVVEP 342
S ++ D V+ P
Sbjct: 58 SFELEDEVMLP 68
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 358 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 525
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 819 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFP 874
>At5g46510.1 68418.m05727 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1353
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 358 SVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFP 525
++ LVE + ++N DIC+ S PT +L LVSL + G + RFP
Sbjct: 780 NIPNLVELSSSFQNLNNLERLDICYCRNLESLPTGINLESLVSLNLFGCSRLKRFP 835
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -1
Query: 247 GGCPYRNRCRRRASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCS 110
G CP R R S G GG P+P RR KL P CS
Sbjct: 32 GSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At5g24010.1 68418.m02821 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 824
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 212 SECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQL 93
SE W P R+ S++ RTT +T S+S ++ A+L
Sbjct: 443 SESTGWTPLRRFRGSSNSRTTERTVSSSGYHTLRISFAEL 482
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -1
Query: 247 GGCPYRN---RCRRRASVSVGIPGGNHTIPLP 161
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 432 PHAKTIHTHIRRPEPPGVADHVRRDDVPAVPRTAERRP 545
P T H RR PP H R PA+ RRP
Sbjct: 13 PPLATTAGHHRRSPPPATTGHHHRSPPPAITACHHRRP 50
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 205 VSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSC 92
VS G+PG HT P ++ ++ +++ P S PW SC
Sbjct: 136 VSSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPW-SC 172
>At2g32780.1 68415.m04013 ubiquitin-specific protease 1, putative
(UBP1) similar to GI:11993461
Length = 1083
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 550 CAGRRSAVRGTA-GTSSRRTWSATPGGSGRRMWVWIVLACG 431
C R RG+ G S+RR W ++ + R +W+ L CG
Sbjct: 59 CNERVHVKRGSRWGASNRRDWYSSSDQNCARNAIWLCLECG 99
>At1g45201.2 68414.m05185 lipase class 3 family protein Since this
genomic sequence region is unfinished, the annotated
gene may be missing a stop codon or start codon
Length = 479
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 283 FCQGTLL*FWR*GGCPYRNRCRRRASVSVGI--PGGNHTIPLPFERRLKLNRRAQHPPCS 110
F + +L FW+ G Y+ R VGI PGG++ P + +L + PP +
Sbjct: 412 FIRSFILQFWK--GDEYKENWLMRFVRVVGIVFPGGSNHFPFDYVNSTRLGGLVRPPPTT 469
Query: 109 VP 104
P
Sbjct: 470 TP 471
>At4g00220.1 68417.m00023 LOB domain protein 30 / lateral organ
boundaries domain protein 30 (LBD30) identical to LOB
DOMAIN 30 [Arabidopsis thaliana] GI:16660632; supported
by full-length cDNA gi:16660631
Length = 228
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 409 EALYDICFRT-LKLSTPTYGDLNHLVSLTMSGVT 507
+A+ ICF +L P YG ++H+VSL V+
Sbjct: 73 DAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVS 106
>At2g47830.2 68415.m05970 cation efflux family protein / metal
tolerance protein, putative (MTPc1) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 468
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 225 RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHS 332
R+ +GHP H Q Q + P + E IF +T +G S
Sbjct: 54 RWHFGHPDHHQ-QYQKPGEEGEKIFRLGLTADIGLS 88
>At2g47830.1 68415.m05969 cation efflux family protein / metal
tolerance protein, putative (MTPc1) member of the cation
diffusion facilitator (CDF) family, or cation efflux
(CE) family, PMID:11500563
Length = 471
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 225 RFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGHS 332
R+ +GHP H Q Q + P + E IF +T +G S
Sbjct: 54 RWHFGHPDHHQ-QYQKPGEEGEKIFRLGLTADIGLS 88
>At2g41840.1 68415.m05171 40S ribosomal protein S2 (RPS2C)
Length = 285
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 545 RSAFSCPGNRRHVVTPDMVSDTRWFRSPYVGVDSFSVRKQIS 420
++ F C +TP+ +TR+ RSPY F K +S
Sbjct: 232 KATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLASKALS 273
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,929,602
Number of Sequences: 28952
Number of extensions: 272764
Number of successful extensions: 883
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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