Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0760
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.65 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    24   1.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.5  
AM269505-1|CAK30048.1|   10|Tribolium castaneum mlpt peptide 1 p...    22   3.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.5  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.65
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +2

Query: 41  DSSIMDVKVLD--PTGIY*KYEIQEFFNEIRLYSDEIFQNARLGSDRSLLKN*RGLRLGI 214
           D SI  +  L+  PT IY   EIQ F  +I      I       + ++     RGL L  
Sbjct: 343 DESIKPLLTLNSVPTEIY-NLEIQRFIQQIGNSDIAI-------TGKNFFSITRGLILSF 394

Query: 215 FSETIFSRCMFLIRLAFI 268
               +F  C  L+ +AFI
Sbjct: 395 VDYFVFLLCSILVNIAFI 412


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 78  PEFTRNTKFKSFLMKFVYIPMKFS 149
           P+ T  TK  S L+KF Y  +KF+
Sbjct: 73  PQPTSVTKISSTLLKFPYRSIKFN 96


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 405 GPDRCILKDFLVLSLKCSFSILL 473
           GP  CI K F +L LK +   +L
Sbjct: 447 GPRNCIGKKFAMLELKAAICGIL 469


>AM269505-1|CAK30048.1|   10|Tribolium castaneum mlpt peptide 1
           protein.
          Length = 10

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 153 MLGLDPTGVY 182
           M GLDPTG+Y
Sbjct: 1   MSGLDPTGLY 10



 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +1

Query: 400 GLDPTGVY 423
           GLDPTG+Y
Sbjct: 3   GLDPTGLY 10



 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 557 GLDPTGVY 580
           GLDPTG+Y
Sbjct: 3   GLDPTGLY 10


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 405 GPDRCILKDFLVLSLKCSFSILL 473
           GP  CI K F +L LK +   +L
Sbjct: 447 GPRNCIGKKFAMLELKAAICGIL 469


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,295
Number of Sequences: 336
Number of extensions: 2826
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)