Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0760
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   4.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   4.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   4.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   4.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   5.3  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.3  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 264 NASRIKNIHLENIVSENIPN 205
           N   IK I+  N++  N PN
Sbjct: 14  NGEEIKTIYSWNVIEYNFPN 33


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 401 AWTRPVYIERLLSVKLKMFILDPTN 475
           AWT+ +Y++R   + + +    PT+
Sbjct: 252 AWTKVIYVKRFFGLPVGVTAAIPTS 276


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 401 AWTRPVYIERLLSVKLKMFILDPTN 475
           AWT+ +Y++R   + + +    PT+
Sbjct: 252 AWTKVIYVKRFFGLPVGVTAAIPTS 276


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 401 AWTRPVYIERLLSVKLKMFILDPTN 475
           AWT+ +Y++R   + + +    PT+
Sbjct: 252 AWTKVIYVKRFFGLPVGVTAAIPTS 276


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 326 EHFSNNPSFDENEVNFPSDQ 267
           E FSN P ++EN V +   Q
Sbjct: 284 EQFSN-PQYEENNVQYEGSQ 302


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = +3

Query: 225 RYFQDVCS*SDWRLLIGRKIYFIFIERRIIAK 320
           +Y Q      D +  IGR   ++++ ++++A+
Sbjct: 255 KYLQQQAGQQDQQANIGRGAQYLYLHQQLLAR 286


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 27  ILHLRTHQLWTSKFWI 74
           ILHLR  ++W    W+
Sbjct: 219 ILHLRHTKIWLRPDWL 234


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,164
Number of Sequences: 438
Number of extensions: 3325
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)