Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0757
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.7  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.2  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 211 CISSTRNGKRKRRTPLATQQIIDL 282
           C        RK RTP  TQQ++ L
Sbjct: 107 CALRKHKPNRKPRTPFTTQQLLAL 130


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 492 HIFLLVNFIYIYNMYLL 442
           H+ LLV   Y Y M+LL
Sbjct: 251 HLLLLVCIYYFYYMHLL 267


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 202 VFIILSLLX-PLVTFSRPILLREWSSYTAHGSNHFVTSN 89
           VF + ++    L TF + I+ + WS +TA  + H + +N
Sbjct: 309 VFYVANIFSLDLDTFKK-IMQKAWSFFTALKNMHDIRNN 346


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 211 CISSTRNGKRKRRTPLA 261
           CI   R+  RK  TPLA
Sbjct: 51  CIEGLRDCPRKYSTPLA 67


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 211 CISSTRNGKRKRRTPLA 261
           CI   R+  RK  TPLA
Sbjct: 47  CIEGLRDCPRKYSTPLA 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,979
Number of Sequences: 336
Number of extensions: 1996
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)