Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0757
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U30707-1|AAB37235.1| 1871|Homo sapiens dihydropyridine receptor ...    29   9.1  
L33798-1|AAA51902.1| 1873|Homo sapiens dihydropyridine-sensitive...    29   9.1  
BC133671-1|AAI33672.1| 1873|Homo sapiens CACNA1S protein protein.      29   9.1  
AL358473-3|CAI12387.1| 1854|Homo sapiens calcium channel, voltag...    29   9.1  
AL358473-2|CAI12386.1| 1873|Homo sapiens calcium channel, voltag...    29   9.1  
AL139159-2|CAI23206.1| 1854|Homo sapiens calcium channel, voltag...    29   9.1  
AL139159-1|CAI23207.1| 1873|Homo sapiens calcium channel, voltag...    29   9.1  

>U30707-1|AAB37235.1| 1871|Homo sapiens dihydropyridine receptor alpha
            1 subunit protein.
          Length = 1871

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1356 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1400


>L33798-1|AAA51902.1| 1873|Homo sapiens dihydropyridine-sensitive
            L-type calcium channel alpha-1 subunit protein.
          Length = 1873

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1358 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1402


>BC133671-1|AAI33672.1| 1873|Homo sapiens CACNA1S protein protein.
          Length = 1873

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1358 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1402


>AL358473-3|CAI12387.1| 1854|Homo sapiens calcium channel,
            voltage-dependent, L type, alphading protein (CREB) 2
            (TORC2) protein.
          Length = 1854

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1339 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1383


>AL358473-2|CAI12386.1| 1873|Homo sapiens calcium channel,
            voltage-dependent, L type, alphafluid) protein.
          Length = 1873

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1358 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1402


>AL139159-2|CAI23206.1| 1854|Homo sapiens calcium channel,
            voltage-dependent, L type, alpha protein.
          Length = 1854

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1339 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1383


>AL139159-1|CAI23207.1| 1873|Homo sapiens calcium channel,
            voltage-dependent, L type, alphase 5 (class III), chi
            polypept protein.
          Length = 1873

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -2

Query: 235  YHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHF 101
            Y+Y ++ Y L  F++++L   ++  +   L R+WS    H  + F
Sbjct: 1358 YYYFISFYMLCAFLVINLFVAVIMDNFDYLTRDWSILGPHHLDEF 1402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,489,545
Number of Sequences: 237096
Number of extensions: 1033250
Number of successful extensions: 5172
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5172
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)