Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0757
         (500 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2333|AAN13739.1|  487|Drosophila melanogaster CG31262-P...    30   1.5  
U00690-1|AAA81883.1| 2516|Drosophila melanogaster calcium channe...    28   6.2  
AE014134-2676|AAN10931.1| 2300|Drosophila melanogaster CG4894-PD...    28   6.2  
AE014134-2675|AAF53504.1| 2516|Drosophila melanogaster CG4894-PA...    28   6.2  
AE014134-2674|AAN10930.1| 2552|Drosophila melanogaster CG4894-PC...    28   6.2  
AE014134-2673|AAN10929.1| 2519|Drosophila melanogaster CG4894-PB...    28   6.2  
AE014296-1816|AAF50158.1|  574|Drosophila melanogaster CG12303-P...    28   8.2  

>AE014297-2333|AAN13739.1|  487|Drosophila melanogaster CG31262-PA
           protein.
          Length = 487

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -2

Query: 328 QYFLFTRNVKQIHVSRGQ*SVVSRGASAACVYHYGLTKYKLRVFIIL 188
           +Y + +RN+K I VS     V S   + + +YHYG   Y + V IIL
Sbjct: 43  EYLMGSRNMKVIPVSITLYRVTSIIGTPSEIYHYGTQYYLIIVAIIL 89


>U00690-1|AAA81883.1| 2516|Drosophila melanogaster calcium channel
            alpha-1 subunit protein.
          Length = 2516

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 247  AACVYHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHFV 98
            ++  Y Y ++ Y L  F+I++L   ++  +   L R+WS    H  + F+
Sbjct: 1899 SSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFI 1948


>AE014134-2676|AAN10931.1| 2300|Drosophila melanogaster CG4894-PD,
            isoform D protein.
          Length = 2300

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 247  AACVYHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHFV 98
            ++  Y Y ++ Y L  F+I++L   ++  +   L R+WS    H  + F+
Sbjct: 1899 SSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFI 1948


>AE014134-2675|AAF53504.1| 2516|Drosophila melanogaster CG4894-PA,
            isoform A protein.
          Length = 2516

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 247  AACVYHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHFV 98
            ++  Y Y ++ Y L  F+I++L   ++  +   L R+WS    H  + F+
Sbjct: 1899 SSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFI 1948


>AE014134-2674|AAN10930.1| 2552|Drosophila melanogaster CG4894-PC,
            isoform C protein.
          Length = 2552

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 247  AACVYHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHFV 98
            ++  Y Y ++ Y L  F+I++L   ++  +   L R+WS    H  + F+
Sbjct: 1935 SSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFI 1984


>AE014134-2673|AAN10929.1| 2519|Drosophila melanogaster CG4894-PB,
            isoform B protein.
          Length = 2519

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 247  AACVYHYGLTKYKLRVFIILSLLXPLVTFSRPILLREWSSYTAHGSNHFV 98
            ++  Y Y ++ Y L  F+I++L   ++  +   L R+WS    H  + F+
Sbjct: 1902 SSIAYPYFISFYVLCSFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFI 1951


>AE014296-1816|AAF50158.1|  574|Drosophila melanogaster CG12303-PA
           protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = +2

Query: 191 YNKYPKFVFRQPVMVNASGGRP 256
           + K+P  +++QP+ ++A+ GRP
Sbjct: 459 FRKFPHLLYQQPLQISAAFGRP 480


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,141,565
Number of Sequences: 53049
Number of extensions: 325333
Number of successful extensions: 617
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)