Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0756
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 3.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 5.0
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 21 6.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 6.7
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 8.8
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 8.8
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 8.8
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 8.8
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 22.2 bits (45), Expect = 3.8
Identities = 6/21 (28%), Positives = 15/21 (71%)
Frame = +1
Query: 199 LCSNDVDVPVGSIIHTGMQNE 261
+C++ VD+P+ +I+ + +E
Sbjct: 567 MCTHQVDIPLNAIVEVVLVDE 587
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 616 AKLVRYIEHISQLFRCAS 563
AK V+ +HI++++ CA+
Sbjct: 551 AKAVKNSDHITRIYACAT 568
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 616 AKLVRYIEHISQLFRCAS 563
AK V+ +HI++++ CA+
Sbjct: 551 AKAVKNSDHITRIYACAT 568
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 616 AKLVRYIEHISQLFRCAS 563
AK V+ +HI++++ CA+
Sbjct: 551 AKAVKNSDHITRIYACAT 568
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 616 AKLVRYIEHISQLFRCAS 563
AK V+ +HI++++ CA+
Sbjct: 551 AKAVKNSDHITRIYACAT 568
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 465 RTDRH*PVAFELSVLHVQGDRRRSGQWDSGD 557
R + PV L+ H+Q + + + D+GD
Sbjct: 40 RPPKRAPVGLSLAASHLQQQQLKKQRLDNGD 70
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 10 NESEKPRPFKIAHTRTFGKPPWFDAVQREY 99
NE K K+ KP W+ +Q +Y
Sbjct: 75 NEKHKEGVRKVIRHLIKNKPSWWQELQEKY 104
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/21 (28%), Positives = 15/21 (71%)
Frame = +1
Query: 199 LCSNDVDVPVGSIIHTGMQNE 261
+C++ VD+P+ +I+ + +E
Sbjct: 567 MCTHKVDIPLNAIVEIVLVDE 587
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 270 TPSLVLHSSVNDTPDGNVHVVGT 202
TP++VL N PD + V GT
Sbjct: 312 TPNVVLDEEGNPCPDIIIDVHGT 334
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 10 NESEKPRPFKIAHTRTFGKPPWFDAVQREY 99
NE K K+ H KP W+ ++ ++
Sbjct: 76 NEKHKEGVRKVIHHLIENKPNWWQELESKF 105
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 10 NESEKPRPFKIAHTRTFGKPPWFDAVQREY 99
NE K K+ H KP W+ ++ ++
Sbjct: 76 NEKHKEGVRKVLHHLIKNKPNWWQELEAKF 105
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 10 NESEKPRPFKIAHTRTFGKPPWFDAVQREY 99
NE K K+ H KP W+ ++ ++
Sbjct: 76 NEKHKEGVRKVIHHLIENKPNWWQELESKF 105
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,691
Number of Sequences: 336
Number of extensions: 2772
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -