BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0756 (650 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC150251-1|AAI50252.1| 878|Homo sapiens pyruvate dehydrogenase ... 193 4e-49 AB082521-1|BAC02699.1| 883|Homo sapiens KIAA1990 protein protein. 193 4e-49 AK000941-1|BAA91436.2| 614|Homo sapiens protein ( Homo sapiens ... 189 9e-48 BC033217-1|AAH33217.1| 611|Homo sapiens SARDH protein protein. 62 2e-09 AL590710-3|CAI12276.1| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09 AL365494-4|CAI13356.1| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09 AK223402-1|BAD97122.1| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09 AF095735-1|AAD53398.2| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09 AF129265-1|AAD33412.1| 602|Homo sapiens unknown protein. 59 1e-08 AF162428-1|AAD43585.1| 918|Homo sapiens sarcosine dehydrogenase... 59 2e-08 AF140745-1|AAD32214.1| 918|Homo sapiens sarcosine dehydrogenase... 59 2e-08 AF111858-1|AAF21941.1| 866|Homo sapiens dimethylglycine dehydro... 54 6e-07 AL590710-1|CAI12274.1| 368|Homo sapiens sarcosine dehydrogenase... 42 0.001 AL365494-3|CAI13355.1| 368|Homo sapiens sarcosine dehydrogenase... 42 0.001 AL590710-2|CAI12275.1| 609|Homo sapiens sarcosine dehydrogenase... 34 0.51 AY365336-1|AAQ55268.1| 107|Homo sapiens thyroglobulin autoantib... 30 8.2 AM040519-1|CAJ13427.1| 107|Homo sapiens immunoglobulin kappa ch... 30 8.2 >BC150251-1|AAI50252.1| 878|Homo sapiens pyruvate dehydrogenase phosphatase regulatory subunit protein. Length = 878 Score = 193 bits (471), Expect = 4e-49 Identities = 89/182 (48%), Positives = 119/182 (65%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 + ++TF KP WFD V+ E C+E V + D SSFTK +I S G + +E+LQYL SND+D Sbjct: 494 LEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLD 553 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTL 399 VPVG I+HTGM NE GGYENDCS+AR+++ + MI+PT QQ C WLK+H+P + ++ L Sbjct: 554 VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLL 613 Query: 400 SDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGX 579 DVT YTA+ ++GP +FP KE+ VG ANGIR M++THTG Sbjct: 614 EDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGE 673 Query: 580 AG 585 G Sbjct: 674 PG 675 >AB082521-1|BAC02699.1| 883|Homo sapiens KIAA1990 protein protein. Length = 883 Score = 193 bits (471), Expect = 4e-49 Identities = 89/182 (48%), Positives = 119/182 (65%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 + ++TF KP WFD V+ E C+E V + D SSFTK +I S G + +E+LQYL SND+D Sbjct: 499 LEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLD 558 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTL 399 VPVG I+HTGM NE GGYENDCS+AR+++ + MI+PT QQ C WLK+H+P + ++ L Sbjct: 559 VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLL 618 Query: 400 SDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGX 579 DVT YTA+ ++GP +FP KE+ VG ANGIR M++THTG Sbjct: 619 EDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGE 678 Query: 580 AG 585 G Sbjct: 679 PG 680 >AK000941-1|BAA91436.2| 614|Homo sapiens protein ( Homo sapiens cDNA FLJ10079 fis, clone HEMBA1001896, weakly similar to DIMETHYLGLYCINE DEHYDROGENASE PRECURSOR (EC 1.5.99.2). ). Length = 614 Score = 189 bits (460), Expect = 9e-48 Identities = 87/182 (47%), Positives = 118/182 (64%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 + ++TF KP WFD V+ E C+E V + D SSFTK +I S G + +E+LQYL S+D+D Sbjct: 223 LEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSSDLD 282 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTL 399 VPVG I+HTGM NE GGYENDCS+AR+++ + MI+PT QQ C WLK+H+P + ++ L Sbjct: 283 VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLL 342 Query: 400 SDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGX 579 DVT YTA+ ++GP +FP KE+ VG A GIR M++THTG Sbjct: 343 EDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYAKGIRVMSMTHTGE 402 Query: 580 AG 585 G Sbjct: 403 PG 404 >BC033217-1|AAH33217.1| 611|Homo sapiens SARDH protein protein. Length = 611 Score = 61.7 bits (143), Expect = 2e-09 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 185 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 242 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384 P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+ Sbjct: 243 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 302 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 303 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 361 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 362 GHLVRAMRLSFVGELG 377 >AL590710-3|CAI12276.1| 918|Homo sapiens sarcosine dehydrogenase protein. Length = 918 Score = 61.7 bits (143), Expect = 2e-09 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384 P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+ Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 719 GHLVRAMRLSFVGELG 734 >AL365494-4|CAI13356.1| 918|Homo sapiens sarcosine dehydrogenase protein. Length = 918 Score = 61.7 bits (143), Expect = 2e-09 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384 P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+ Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 719 GHLVRAMRLSFVGELG 734 >AK223402-1|BAD97122.1| 918|Homo sapiens sarcosine dehydrogenase variant protein. Length = 918 Score = 61.7 bits (143), Expect = 2e-09 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384 P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+ Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 719 GHLVRAMRLSFVGELG 734 >AF095735-1|AAD53398.2| 918|Homo sapiens sarcosine dehydrogenase protein. Length = 918 Score = 61.7 bits (143), Expect = 2e-09 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384 P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+ Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 719 GHLVRAMRLSFVGELG 734 >AF129265-1|AAD33412.1| 602|Homo sapiens unknown protein. Length = 602 Score = 59.3 bits (137), Expect = 1e-08 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 262 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 319 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKV----WLKRHLPSN 384 P GS ++T M N GG E+D +++R++ +H +AP + + + +H S+ Sbjct: 320 RPPGSTVYTCMLNHHGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAVGGAVAQHNWSH 379 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 380 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 438 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 439 GHLVRAMRLSFVGELG 454 >AF162428-1|AAD43585.1| 918|Homo sapiens sarcosine dehydrogenase protein. Length = 918 Score = 58.8 bits (136), Expect = 2e-08 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYL--VGLDARKAADWLFSADVS 599 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKV----WLKRHLPSN 384 P GS ++T M N GG E+D +++R++ +H +AP + + + +H S+ Sbjct: 600 RPPGSTVYTCMLNHXGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAXGGAVAQHNWSH 659 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 719 GHLVRAMRLSFVGELG 734 >AF140745-1|AAD32214.1| 918|Homo sapiens sarcosine dehydrogenase protein. Length = 918 Score = 58.8 bits (136), Expect = 2e-08 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 14/196 (7%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYL--VGLDARKAADWLFSADVS 599 Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKV----WLKRHLPSN 384 P GS ++T M N GG E+D +++R++ +H +AP + + + +H S+ Sbjct: 600 RPPGSTVYTCMLNHXGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAXGGAVAQHNWSH 659 Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537 + L D S I + GP +R FPF T K + Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718 Query: 538 ANGIRAMNLTHTGXAG 585 + +RAM L+ G G Sbjct: 719 GHLVRAMRLSFVGELG 734 >AF111858-1|AAF21941.1| 866|Homo sapiens dimethylglycine dehydrogenase precursor protein. Length = 866 Score = 53.6 bits (123), Expect = 6e-07 Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 1/178 (0%) Frame = +1 Query: 55 TFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVDVPVGS 234 +F + WF+ V EY +RVG++D S F K +I +G++ + LL +L +N V VG Sbjct: 508 SFRRTNWFEPVGSEYKQVMQRVGVTDLSPFGKFNI--KGQDSIRLLDHLFAN-VIPKVGF 564 Query: 235 IIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNG-SVTLSDVT 411 + M +G + +++ S +++I + + W++ G V + ++T Sbjct: 565 TNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNIT 624 Query: 412 SMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGXAG 585 + V GP R F F K + V + A+ +++TG G Sbjct: 625 DELGVLGVAGPQARKVLQKLTPEDLSDDVFKFLQTKSLKVSNI-PVTAIRISYTGELG 681 >AL590710-1|CAI12274.1| 368|Homo sapiens sarcosine dehydrogenase protein. Length = 368 Score = 42.3 bits (95), Expect = 0.001 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%) Frame = +1 Query: 169 GREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQT 345 G + + +L S DV P GS ++T M N RGG E+D +++R++ +H +AP + Sbjct: 11 GLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGD 70 Query: 346 RCKVWL----KRHLPSNGSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXX 486 + + +H S+ + L D S I + GP +R Sbjct: 71 GYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADL 130 Query: 487 XXXNFPFFTFKEIDVGLANGIRAMNLTHTGXAG 585 FPF T K + + +RAM L+ G G Sbjct: 131 SNEAFPFSTHKLLRAA-GHLVRAMRLSFVGELG 162 >AL365494-3|CAI13355.1| 368|Homo sapiens sarcosine dehydrogenase protein. Length = 368 Score = 42.3 bits (95), Expect = 0.001 Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%) Frame = +1 Query: 169 GREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQT 345 G + + +L S DV P GS ++T M N RGG E+D +++R++ +H +AP + Sbjct: 11 GLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGD 70 Query: 346 RCKVWL----KRHLPSNGSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXX 486 + + +H S+ + L D S I + GP +R Sbjct: 71 GYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADL 130 Query: 487 XXXNFPFFTFKEIDVGLANGIRAMNLTHTGXAG 585 FPF T K + + +RAM L+ G G Sbjct: 131 SNEAFPFSTHKLLRAA-GHLVRAMRLSFVGELG 162 >AL590710-2|CAI12275.1| 609|Homo sapiens sarcosine dehydrogenase protein. Length = 609 Score = 33.9 bits (74), Expect = 0.51 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +1 Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219 +A TF PP D +++E ACR + D S F K + G + + +L S DV Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYL--VGLDARKAADWLFSADVS 599 Query: 220 VPVG 231 P G Sbjct: 600 RPPG 603 >AY365336-1|AAQ55268.1| 107|Homo sapiens thyroglobulin autoantibody #18 light chain VJ region protein. Length = 107 Score = 29.9 bits (64), Expect = 8.2 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 Query: 206 PTTWTFPSGVSFTLECRTSEGVTRMTAAWLGYR 304 P T + G S TL CR S+ V R AW R Sbjct: 6 PATLSVSPGESATLSCRASQNVDRNNLAWYQQR 38 >AM040519-1|CAJ13427.1| 107|Homo sapiens immunoglobulin kappa chain variable region protein. Length = 107 Score = 29.9 bits (64), Expect = 8.2 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 Query: 206 PTTWTFPSGVSFTLECRTSEGVTRMTAAW 292 P T + P G TL CR S+ VT AW Sbjct: 8 PGTLSLPPGERATLSCRASQSVTNNYLAW 36 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 88,586,190 Number of Sequences: 237096 Number of extensions: 1799168 Number of successful extensions: 6221 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 6025 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6212 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7253890590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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