Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0756
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150251-1|AAI50252.1| 878|Homo sapiens pyruvate dehydrogenase ... 193 4e-49
AB082521-1|BAC02699.1| 883|Homo sapiens KIAA1990 protein protein. 193 4e-49
AK000941-1|BAA91436.2| 614|Homo sapiens protein ( Homo sapiens ... 189 9e-48
BC033217-1|AAH33217.1| 611|Homo sapiens SARDH protein protein. 62 2e-09
AL590710-3|CAI12276.1| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09
AL365494-4|CAI13356.1| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09
AK223402-1|BAD97122.1| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09
AF095735-1|AAD53398.2| 918|Homo sapiens sarcosine dehydrogenase... 62 2e-09
AF129265-1|AAD33412.1| 602|Homo sapiens unknown protein. 59 1e-08
AF162428-1|AAD43585.1| 918|Homo sapiens sarcosine dehydrogenase... 59 2e-08
AF140745-1|AAD32214.1| 918|Homo sapiens sarcosine dehydrogenase... 59 2e-08
AF111858-1|AAF21941.1| 866|Homo sapiens dimethylglycine dehydro... 54 6e-07
AL590710-1|CAI12274.1| 368|Homo sapiens sarcosine dehydrogenase... 42 0.001
AL365494-3|CAI13355.1| 368|Homo sapiens sarcosine dehydrogenase... 42 0.001
AL590710-2|CAI12275.1| 609|Homo sapiens sarcosine dehydrogenase... 34 0.51
AY365336-1|AAQ55268.1| 107|Homo sapiens thyroglobulin autoantib... 30 8.2
AM040519-1|CAJ13427.1| 107|Homo sapiens immunoglobulin kappa ch... 30 8.2
>BC150251-1|AAI50252.1| 878|Homo sapiens pyruvate dehydrogenase
phosphatase regulatory subunit protein.
Length = 878
Score = 193 bits (471), Expect = 4e-49
Identities = 89/182 (48%), Positives = 119/182 (65%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+ ++TF KP WFD V+ E C+E V + D SSFTK +I S G + +E+LQYL SND+D
Sbjct: 494 LEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLD 553
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTL 399
VPVG I+HTGM NE GGYENDCS+AR+++ + MI+PT QQ C WLK+H+P + ++ L
Sbjct: 554 VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLL 613
Query: 400 SDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGX 579
DVT YTA+ ++GP +FP KE+ VG ANGIR M++THTG
Sbjct: 614 EDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGE 673
Query: 580 AG 585
G
Sbjct: 674 PG 675
>AB082521-1|BAC02699.1| 883|Homo sapiens KIAA1990 protein protein.
Length = 883
Score = 193 bits (471), Expect = 4e-49
Identities = 89/182 (48%), Positives = 119/182 (65%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+ ++TF KP WFD V+ E C+E V + D SSFTK +I S G + +E+LQYL SND+D
Sbjct: 499 LEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLD 558
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTL 399
VPVG I+HTGM NE GGYENDCS+AR+++ + MI+PT QQ C WLK+H+P + ++ L
Sbjct: 559 VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLL 618
Query: 400 SDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGX 579
DVT YTA+ ++GP +FP KE+ VG ANGIR M++THTG
Sbjct: 619 EDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGE 678
Query: 580 AG 585
G
Sbjct: 679 PG 680
>AK000941-1|BAA91436.2| 614|Homo sapiens protein ( Homo sapiens
cDNA FLJ10079 fis, clone HEMBA1001896, weakly similar to
DIMETHYLGLYCINE DEHYDROGENASE PRECURSOR (EC 1.5.99.2).
).
Length = 614
Score = 189 bits (460), Expect = 9e-48
Identities = 87/182 (47%), Positives = 118/182 (64%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+ ++TF KP WFD V+ E C+E V + D SSFTK +I S G + +E+LQYL S+D+D
Sbjct: 223 LEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSSDLD 282
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNGSVTL 399
VPVG I+HTGM NE GGYENDCS+AR+++ + MI+PT QQ C WLK+H+P + ++ L
Sbjct: 283 VPVGHIVHTGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLL 342
Query: 400 SDVTSMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGX 579
DVT YTA+ ++GP +FP KE+ VG A GIR M++THTG
Sbjct: 343 EDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYAKGIRVMSMTHTGE 402
Query: 580 AG 585
G
Sbjct: 403 PG 404
>BC033217-1|AAH33217.1| 611|Homo sapiens SARDH protein protein.
Length = 611
Score = 61.7 bits (143), Expect = 2e-09
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 185 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 242
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384
P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+
Sbjct: 243 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 302
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 303 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 361
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 362 GHLVRAMRLSFVGELG 377
>AL590710-3|CAI12276.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 61.7 bits (143), Expect = 2e-09
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384
P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+
Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 719 GHLVRAMRLSFVGELG 734
>AL365494-4|CAI13356.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 61.7 bits (143), Expect = 2e-09
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384
P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+
Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 719 GHLVRAMRLSFVGELG 734
>AK223402-1|BAD97122.1| 918|Homo sapiens sarcosine dehydrogenase
variant protein.
Length = 918
Score = 61.7 bits (143), Expect = 2e-09
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384
P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+
Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 719 GHLVRAMRLSFVGELG 734
>AF095735-1|AAD53398.2| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 61.7 bits (143), Expect = 2e-09
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 599
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKVWL----KRHLPSN 384
P GS ++T M N RGG E+D +++R++ +H +AP + + + +H S+
Sbjct: 600 RPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAMGGAVAQHNWSH 659
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 719 GHLVRAMRLSFVGELG 734
>AF129265-1|AAD33412.1| 602|Homo sapiens unknown protein.
Length = 602
Score = 59.3 bits (137), Expect = 1e-08
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 262 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYLV--GLDARKAADWLFSADVS 319
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKV----WLKRHLPSN 384
P GS ++T M N GG E+D +++R++ +H +AP + + + +H S+
Sbjct: 320 RPPGSTVYTCMLNHHGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAVGGAVAQHNWSH 379
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 380 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 438
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 439 GHLVRAMRLSFVGELG 454
>AF162428-1|AAD43585.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 58.8 bits (136), Expect = 2e-08
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYL--VGLDARKAADWLFSADVS 599
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKV----WLKRHLPSN 384
P GS ++T M N GG E+D +++R++ +H +AP + + + +H S+
Sbjct: 600 RPPGSTVYTCMLNHXGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAXGGAVAQHNWSH 659
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 719 GHLVRAMRLSFVGELG 734
>AF140745-1|AAD32214.1| 918|Homo sapiens sarcosine dehydrogenase
protein.
Length = 918
Score = 58.8 bits (136), Expect = 2e-08
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYL--VGLDARKAADWLFSADVS 599
Query: 220 VPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQTRCKV----WLKRHLPSN 384
P GS ++T M N GG E+D +++R++ +H +AP + + + +H S+
Sbjct: 600 RPPGSTVYTCMLNHXGGTESDLTVSRLAPSHQASPLAPAFEGDGYYLAXGGAVAQHNWSH 659
Query: 385 GSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGL 537
+ L D S I + GP +R FPF T K +
Sbjct: 660 ITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADLSNEAFPFSTHKLLRAA- 718
Query: 538 ANGIRAMNLTHTGXAG 585
+ +RAM L+ G G
Sbjct: 719 GHLVRAMRLSFVGELG 734
>AF111858-1|AAF21941.1| 866|Homo sapiens dimethylglycine
dehydrogenase precursor protein.
Length = 866
Score = 53.6 bits (123), Expect = 6e-07
Identities = 42/178 (23%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Frame = +1
Query: 55 TFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVDVPVGS 234
+F + WF+ V EY +RVG++D S F K +I +G++ + LL +L +N V VG
Sbjct: 508 SFRRTNWFEPVGSEYKQVMQRVGVTDLSPFGKFNI--KGQDSIRLLDHLFAN-VIPKVGF 564
Query: 235 IIHTGMQNERGGYENDCSLARISENHYMMIAPTIQQTRCKVWLKRHLPSNG-SVTLSDVT 411
+ M +G + +++ S +++I + + W++ G V + ++T
Sbjct: 565 TNISHMLTPKGRVYAELTVSHQSPGEFLLITGSGSELHDLRWIEEEAVKGGYDVEIKNIT 624
Query: 412 SMYTAICVMGPFTRXXXXXXXXXXXXXXNFPFFTFKEIDVGLANGIRAMNLTHTGXAG 585
+ V GP R F F K + V + A+ +++TG G
Sbjct: 625 DELGVLGVAGPQARKVLQKLTPEDLSDDVFKFLQTKSLKVSNI-PVTAIRISYTGELG 681
>AL590710-1|CAI12274.1| 368|Homo sapiens sarcosine dehydrogenase
protein.
Length = 368
Score = 42.3 bits (95), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%)
Frame = +1
Query: 169 GREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQT 345
G + + +L S DV P GS ++T M N RGG E+D +++R++ +H +AP +
Sbjct: 11 GLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGD 70
Query: 346 RCKVWL----KRHLPSNGSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXX 486
+ + +H S+ + L D S I + GP +R
Sbjct: 71 GYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADL 130
Query: 487 XXXNFPFFTFKEIDVGLANGIRAMNLTHTGXAG 585
FPF T K + + +RAM L+ G G
Sbjct: 131 SNEAFPFSTHKLLRAA-GHLVRAMRLSFVGELG 162
>AL365494-3|CAI13355.1| 368|Homo sapiens sarcosine dehydrogenase
protein.
Length = 368
Score = 42.3 bits (95), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 14/153 (9%)
Frame = +1
Query: 169 GREVVELLQYLCSNDVDVPVGSIIHTGMQNERGGYENDCSLARISENHYMM-IAPTIQQT 345
G + + +L S DV P GS ++T M N RGG E+D +++R++ +H +AP +
Sbjct: 11 GLDARKAADWLFSADVSRPPGSTVYTCMLNHRGGTESDLTVSRLAPSHQASPLAPAFEGD 70
Query: 346 RCKVWL----KRHLPSNGSVTLSDVTSM---------YTAICVMGPFTRXXXXXXXXXXX 486
+ + +H S+ + L D S I + GP +R
Sbjct: 71 GYYLAMGGAVAQHNWSHITTVLQDQKSQCQLIDSSEDLGMISIQGPASRAILQEVLDADL 130
Query: 487 XXXNFPFFTFKEIDVGLANGIRAMNLTHTGXAG 585
FPF T K + + +RAM L+ G G
Sbjct: 131 SNEAFPFSTHKLLRAA-GHLVRAMRLSFVGELG 162
>AL590710-2|CAI12275.1| 609|Homo sapiens sarcosine dehydrogenase
protein.
Length = 609
Score = 33.9 bits (74), Expect = 0.51
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 40 IAHTRTFGKPPWFDAVQREYWACRERVGLSDYSSFTKIDIQSQGREVVELLQYLCSNDVD 219
+A TF PP D +++E ACR + D S F K + G + + +L S DV
Sbjct: 542 LADEYTFAFPPHHDTIKKECLACRGAAAVFDMSYFGKFYL--VGLDARKAADWLFSADVS 599
Query: 220 VPVG 231
P G
Sbjct: 600 RPPG 603
>AY365336-1|AAQ55268.1| 107|Homo sapiens thyroglobulin autoantibody
#18 light chain VJ region protein.
Length = 107
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 206 PTTWTFPSGVSFTLECRTSEGVTRMTAAWLGYR 304
P T + G S TL CR S+ V R AW R
Sbjct: 6 PATLSVSPGESATLSCRASQNVDRNNLAWYQQR 38
>AM040519-1|CAJ13427.1| 107|Homo sapiens immunoglobulin kappa chain
variable region protein.
Length = 107
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 206 PTTWTFPSGVSFTLECRTSEGVTRMTAAW 292
P T + P G TL CR S+ VT AW
Sbjct: 8 PGTLSLPPGERATLSCRASQSVTNNYLAW 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,586,190
Number of Sequences: 237096
Number of extensions: 1799168
Number of successful extensions: 6221
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6212
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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