Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0755
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p pro...    42   0.001
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact...    42   0.001
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA...    42   0.001
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr...    29   8.0  
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ...    29   8.0  

>BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p
           protein.
          Length = 909

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 501 FKVVEPSFLQKLKEGDCEK--PVFILYPSYTLPDISFL--NGRPNIYLNPMKVNVS 656
           ++ V PSFL+KL     E+  P++++YP+Y LPD+ F+  N   ++  +P    ++
Sbjct: 319 YRCVPPSFLEKLNNLGEERQAPIYVIYPNYALPDLGFVKTNASTDVIFSPFNYKMT 374


>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
            16 protein.
          Length = 1518

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 501  FKVVEPSFLQKLKEGDCEK--PVFILYPSYTLPDISFL--NGRPNIYLNPMKVNVS 656
            ++ V PSFL+KL     E+  P++++YP+Y LPD+ F+  N   ++  +P    ++
Sbjct: 928  YRCVPPSFLEKLNNLGEERQAPIYVIYPNYALPDLGFVKTNASTDVIFSPFNYKMT 983


>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
            protein.
          Length = 1744

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
 Frame = +3

Query: 501  FKVVEPSFLQKLKEGDCEK--PVFILYPSYTLPDISFL--NGRPNIYLNPMKVNVS 656
            ++ V PSFL+KL     E+  P++++YP+Y LPD+ F+  N   ++  +P    ++
Sbjct: 1154 YRCVPPSFLEKLNNLGEERQAPIYVIYPNYALPDLGFVKTNASTDVIFSPFNYKMT 1209


>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
            protein.
          Length = 5327

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +3

Query: 24   PLXIPSSNTDEAFSAVYEEIPSTNPTLFHVQNLN-NRMYDEVLIEEEETADGAKLSDSES 200
            P+ +  S  +E FSA  E   +T PTL   + +  +++ ++++IEE+   +  K  ++E+
Sbjct: 1042 PVNLQESLPEEKFSATIESGATTAPTLPEDERIPLDQIKEDLVIEEKYVKEETK--EAEA 1099

Query: 201  NLYATV 218
             + ATV
Sbjct: 1100 IVVATV 1105


>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
            protein.
          Length = 5412

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +3

Query: 24   PLXIPSSNTDEAFSAVYEEIPSTNPTLFHVQNLN-NRMYDEVLIEEEETADGAKLSDSES 200
            P+ +  S  +E FSA  E   +T PTL   + +  +++ ++++IEE+   +  K  ++E+
Sbjct: 1089 PVNLQESLPEEKFSATIESGATTAPTLPEDERIPLDQIKEDLVIEEKYVKEETK--EAEA 1146

Query: 201  NLYATV 218
             + ATV
Sbjct: 1147 IVVATV 1152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,843,629
Number of Sequences: 53049
Number of extensions: 411350
Number of successful extensions: 1214
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)