Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0755
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    25   0.91 
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    24   1.6  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    24   1.6  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    24   1.6  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    24   1.6  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   1.6  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   1.6  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   1.6  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   1.6  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   1.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   1.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    24   1.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    24   1.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   1.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    23   3.7  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   6.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.4  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   6.4  

>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           LF  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 LFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRNRTH 222


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 162 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 211


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 162 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 211


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 162 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 211


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETA--DGAKLSDSESNLYATVNKTHIKRTH 245
           +F  + + N +     IEE +T      K S +ES  YAT + +   RTH
Sbjct: 173 IFEREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKYATSSNSLRSRTH 222


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 543 GDCEKPVFILYPSYTLPDISFLNGRPNIY 629
           G  ++PV + Y S     + FL+GR  +Y
Sbjct: 80  GKFKEPVAVFYASEIAIGLFFLHGRGIVY 108


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 124 FKFCTWKSVGLVD 86
           + +C W+  GLVD
Sbjct: 72  YMYCLWEQFGLVD 84


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 534 LKEGDCEKPVFILYPSYTLPDISFLNGRPNI 626
           LK  + E P    YP++ + DI+ ++   NI
Sbjct: 82  LKNDESESPKLNPYPNWEMNDINKIDSIINI 112


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +3

Query: 102 LFHVQNLNNRMYDEVLIEEEETADGAKL--SDSESNLYATVNKTHIKRTH 245
           +F  + + N +     I+E +T     +  S++ES  YAT + +   RTH
Sbjct: 162 IFEREEIKNVLTKINKIKEHDTVLVVNIEKSENESKKYATSSNSLRNRTH 211


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,124
Number of Sequences: 438
Number of extensions: 2736
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)