Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0754
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    24   5.8  
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    24   5.8  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    24   5.8  
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    23   7.6  

>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 262 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQN 176
           HH   + HH+ ++H  P I +H    ++Q+
Sbjct: 37  HHAAPAIHHVGSVHAAPAIYQHSAPAIYQH 66


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 262 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQN 176
           HH   + HH+ ++H  P I +H    ++Q+
Sbjct: 37  HHAAPAIHHVGSVHAAPAIYQHSAPAIYQH 66


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 262 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQN 176
           HH   + HH+ ++H  P I +H    ++Q+
Sbjct: 37  HHAAPAIHHVGSVHAAPAIYQHSAPAIYQH 66


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 262 HHRGSSCHHLTTLHPCP-IPRHQYCTLWQNV 173
           HH   + HH+ ++H  P I +H   T+ + +
Sbjct: 37  HHAAPAIHHVGSIHAAPAIYQHSAPTIVKTI 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,884
Number of Sequences: 2352
Number of extensions: 16164
Number of successful extensions: 40
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)