Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0754
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB...   209   3e-54
AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA...   209   3e-54
BT003764-1|AAO41443.1|  595|Drosophila melanogaster RE30068p pro...   209   4e-54
AY070800-1|AAL48422.1|  139|Drosophila melanogaster AT18358p pro...    29   5.1  
AE014297-2591|AAF55602.2|  139|Drosophila melanogaster CG14294-P...    29   5.1  
AF132169-1|AAD34757.1|  879|Drosophila melanogaster unknown prot...    29   8.9  
AE014298-2468|AAF48659.1|  879|Drosophila melanogaster CG9634-PA...    29   8.9  

>AE014296-1928|AAN11883.1|  721|Drosophila melanogaster CG6199-PB,
           isoform B protein.
          Length = 721

 Score =  209 bits (511), Expect = 3e-54
 Identities = 105/229 (45%), Positives = 149/229 (65%), Gaps = 1/229 (0%)
 Frame = +1

Query: 64  LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 243
           L+L       ++ +   D++ V TVAT+   G  R++RSA+VY+I+V  LG GEEW GGD
Sbjct: 10  LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69

Query: 244 MNFPGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVL 423
           M  PGGG K+ LL+  +      +  E IILFTDSYDV+    LDEI +KFK     ++L
Sbjct: 70  MQKPGGGFKLNLLREAIAPY--KNEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKIL 126

Query: 424 FSAEQFCWPDAKLATQYPNIE-VVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYT 600
           FSAE++CWPD  LA  YP +E   S +LNSG FIGY P+++ ++  +PI+D  DDQLY+T
Sbjct: 127 FSAEKYCWPDKSLANDYPEVEGKASRFLNSGAFIGYAPQVFALL-VDPIEDTADDQLYFT 185

Query: 601 KIYLDKDLRESLKITLDHKSEIFQNLNGALSDVQLRANTTEEWPYIENV 747
           KI+LD+  R  L + LD +S +FQNL+GA +DV+L+ +       ++NV
Sbjct: 186 KIFLDETKRAKLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNV 234


>AE014296-1927|AAF50079.1|  721|Drosophila melanogaster CG6199-PA,
           isoform A protein.
          Length = 721

 Score =  209 bits (511), Expect = 3e-54
 Identities = 105/229 (45%), Positives = 149/229 (65%), Gaps = 1/229 (0%)
 Frame = +1

Query: 64  LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 243
           L+L       ++ +   D++ V TVAT+   G  R++RSA+VY+I+V  LG GEEW GGD
Sbjct: 10  LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69

Query: 244 MNFPGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVL 423
           M  PGGG K+ LL+  +      +  E IILFTDSYDV+    LDEI +KFK     ++L
Sbjct: 70  MQKPGGGFKLNLLREAIAPY--KNEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKIL 126

Query: 424 FSAEQFCWPDAKLATQYPNIE-VVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYT 600
           FSAE++CWPD  LA  YP +E   S +LNSG FIGY P+++ ++  +PI+D  DDQLY+T
Sbjct: 127 FSAEKYCWPDKSLANDYPEVEGKASRFLNSGAFIGYAPQVFALL-VDPIEDTADDQLYFT 185

Query: 601 KIYLDKDLRESLKITLDHKSEIFQNLNGALSDVQLRANTTEEWPYIENV 747
           KI+LD+  R  L + LD +S +FQNL+GA +DV+L+ +       ++NV
Sbjct: 186 KIFLDETKRAKLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNV 234


>BT003764-1|AAO41443.1|  595|Drosophila melanogaster RE30068p
           protein.
          Length = 595

 Score =  209 bits (510), Expect = 4e-54
 Identities = 105/229 (45%), Positives = 149/229 (65%), Gaps = 1/229 (0%)
 Frame = +1

Query: 64  LILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDVEVLGKGEEWSGGD 243
           L+L       ++ +   D++ V TVAT+   G  R++RSA+VY+I+V  LG GEEW GGD
Sbjct: 10  LLLLAVTSQGDAESNWNDKIKVFTVATEPTDGYTRYIRSARVYDIEVTTLGLGEEWKGGD 69

Query: 244 MNFPGGGQKVILLKNRLEKLMKADNKEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVL 423
           M  PGGG K+ LL+  +      +  E IILFTDSYDV+    LDEI +KFK     ++L
Sbjct: 70  MQKPGGGFKLNLLREAIAPY--KNEPETIILFTDSYDVIITTTLDEIFEKFKE-SGAKIL 126

Query: 424 FSAEQFCWPDAKLATQYPNIE-VVSPYLNSGGFIGYLPEIYEIINSNPIKDKDDDQLYYT 600
           FSAE++CWPD  LA  YP +E   S +LNSG FIGY P+++ ++  +PI+D  DDQLY+T
Sbjct: 127 FSAEKYCWPDKSLADDYPEVEGKASRFLNSGAFIGYAPQVFALL-VDPIEDTADDQLYFT 185

Query: 601 KIYLDKDLRESLKITLDHKSEIFQNLNGALSDVQLRANTTEEWPYIENV 747
           KI+LD+  R  L + LD +S +FQNL+GA +DV+L+ +       ++NV
Sbjct: 186 KIFLDETKRAKLGLKLDVQSRLFQNLHGAKNDVKLKVDLESNQGVLQNV 234


>AY070800-1|AAL48422.1|  139|Drosophila melanogaster AT18358p
           protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 25  MMWFTQKMGLFIQLILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDV 204
           M W +   G+ +  +LC   I  +   +   + V   +  DD H +    R+AK  N+D 
Sbjct: 1   MSWLSTIFGIILITLLCTIWIAAHPRWEQMAKAVASKMNYDDQHRIHTASRAAK--NVDA 58

Query: 205 EV 210
           ++
Sbjct: 59  QI 60


>AE014297-2591|AAF55602.2|  139|Drosophila melanogaster CG14294-PA
           protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 15/62 (24%), Positives = 28/62 (45%)
 Frame = +1

Query: 25  MMWFTQKMGLFIQLILCVFVILFNSHTQATDEVVVLTVATDDNHGLERFLRSAKVYNIDV 204
           M W +   G+ +  +LC   I  +   +   + V   +  DD H +    R+AK  N+D 
Sbjct: 1   MSWLSTIFGIILITLLCTIWIAAHPRWEQMAKAVASKMNYDDQHRIHTASRAAK--NVDA 58

Query: 205 EV 210
           ++
Sbjct: 59  QI 60


>AF132169-1|AAD34757.1|  879|Drosophila melanogaster unknown
           protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 549 NLIYFWQVTYKSTRVQIWTYNFNVWILSCKFCIRP 445
           N +Y WQ    S R+Q W Y   + +L  K  I P
Sbjct: 274 NAVYGWQAFRDSNRLQSWEYKRVLVVLQAKHGIFP 308


>AE014298-2468|AAF48659.1|  879|Drosophila melanogaster CG9634-PA
           protein.
          Length = 879

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -1

Query: 549 NLIYFWQVTYKSTRVQIWTYNFNVWILSCKFCIRP 445
           N +Y WQ    S R+Q W Y   + +L  K  I P
Sbjct: 274 NAVYGWQAFRDSNRLQSWEYKRVLVVLQAKHGIFP 308


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,415,283
Number of Sequences: 53049
Number of extensions: 729576
Number of successful extensions: 2382
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2370
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)