Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0753
(450 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38) 76 7e-22
SB_41344| Best HMM Match : Peptidase_S9 (HMM E-Value=5.6e-12) 55 3e-08
SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09) 34 0.062
SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34) 31 0.58
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 29 1.3
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_13723| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_5158| Best HMM Match : PH (HMM E-Value=0.28) 27 9.5
>SB_12889| Best HMM Match : Peptidase_S9 (HMM E-Value=1.4e-38)
Length = 253
Score = 76.2 bits (179), Expect(2) = 7e-22
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +1
Query: 190 YSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSLKFVAELQHVAGRSPAQ 348
YSPLHNI+ P +N +YP ++L+ADHDDRVVPLHS KF+AELQHV G Q
Sbjct: 160 YSPLHNIKVP-DNGAQYPPLMLLTADHDDRVVPLHSFKFIAELQHVMGSQDNQ 211
Score = 44.8 bits (101), Expect(2) = 7e-22
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 4 GGSNGGLLVAACINQRPDLYGAAVVQV 84
GGSNGGLLV AC NQ P+L+G + QV
Sbjct: 132 GGSNGGLLVCACANQAPELFGCIIAQV 158
>SB_41344| Best HMM Match : Peptidase_S9 (HMM E-Value=5.6e-12)
Length = 196
Score = 54.8 bits (126), Expect = 3e-08
Identities = 44/133 (33%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Frame = +1
Query: 1 QGGSNGGLLVAACINQRPDLYGAAVVQVG---VLDMLRFQKFTIGHAWVSDYGS-SDNKT 168
+G S GGL+V A N+ P+L+ A V++V VL + + ++G ++
Sbjct: 30 RGVSAGGLVVGAVCNRSPELFKAVVMKVPFLCVLTSMLDPTLPLTSQEYDEWGDPRSSEL 89
Query: 169 QFEYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSLKFVAELQHVAGRSPAQ 348
+Y+ Y P HNI SE R YP L+ + DDRV LK+VA+L+ A Q
Sbjct: 90 DLKYIKSYCPYHNIS--SEKR--YPDMLVSGSIFDDRVPYWVPLKYVAKLRLQAHDQRTQ 145
Query: 349 RAPLLARFDTKAG 387
A DT AG
Sbjct: 146 NAGSQTGADTTAG 158
>SB_12223| Best HMM Match : ShTK (HMM E-Value=1.8e-09)
Length = 542
Score = 33.9 bits (74), Expect = 0.062
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 175 EYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSL 300
+Y ++ LHN+ P + P P +++ D+ R+V LH+L
Sbjct: 146 DYAIRLVCLHNLHNPDTHHPSVPGNTLVNCDYAIRLVCLHNL 187
Score = 33.9 bits (74), Expect = 0.062
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 175 EYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSL 300
+Y ++ LHN+ P + P P +++ D+ R+V LH+L
Sbjct: 296 DYAIRLVCLHNLHNPDTHHPSVPGNTLVNCDYAIRLVCLHNL 337
Score = 33.5 bits (73), Expect = 0.082
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 175 EYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSL 300
+Y ++ LHN+ P P P +++ D+ R+V LH+L
Sbjct: 26 DYAIRLVCLHNLHNPDTRHPSVPGNTLVNCDYAIRLVCLHNL 67
Score = 33.5 bits (73), Expect = 0.082
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 175 EYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSL 300
+Y ++ LHN+ P P P +++ D+ R+V LH+L
Sbjct: 56 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLHNL 97
Score = 33.5 bits (73), Expect = 0.082
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 175 EYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSL 300
+Y ++ LHN+ P P P +++ D+ R+V LH+L
Sbjct: 176 DYAIRLVCLHNLHNPDTRHPSIPGNTLVNCDYAIRLVCLHNL 217
Score = 33.5 bits (73), Expect = 0.082
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 175 EYLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSL 300
+Y ++ LHN+ P P P +++ D+ R+V LH+L
Sbjct: 206 DYAIRLVCLHNLHNPDTRHPSVPGNTLVNCDYAIRLVCLHNL 247
>SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)
Length = 686
Score = 30.7 bits (66), Expect = 0.58
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 341 GERPATCCSSATNFSECSGTTRSSWSADSISVAGYS 234
GERP + E + TTR SWS + SV G S
Sbjct: 79 GERPQQSKGTIVRIKEHTATTRGSWSMEVTSVKGDS 114
>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1169
Score = 30.7 bits (66), Expect = 0.58
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -2
Query: 398 PPPCPALVSNLASSGARC-AGERPATCCSSATNFSECSGTTRSS--WSADSISVAGYS 234
P PCP + +L ++ C A +C A + CSG T S W+ AGYS
Sbjct: 102 PVPCPTGMYSLGAASMNCTACPAGFSCSDPAAPPAACSGATYSEAMWTECKTCPAGYS 159
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 30.3 bits (65), Expect = 0.77
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G ++ C S T SEC G T+SS
Sbjct: 929 TQASECKGVTQSSECKSVTQSSECKGVTKSS 959
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G ++ C T+ SEC G T+SS
Sbjct: 875 TQSSECKGITQSSECKGVTHSSECKGVTQSS 905
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G ++ C T SEC G T+SS
Sbjct: 911 TQSSECKGVTQSSECKGVTQASECKGVTQSS 941
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G ++ C T SEC G T+SS
Sbjct: 884 TQSSECKGVTHSSECKGVTQSSECKGVTQSS 914
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 353 ARCAGERPATCCSSATNFSECSGTTRSS 270
+ C G ++ C T SEC G T+SS
Sbjct: 896 SECKGVTQSSECKGVTQSSECKGVTQSS 923
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G ++ C T SEC G T SS
Sbjct: 866 TQSSECKGITQSSECKGITQSSECKGVTHSS 896
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G ++ C T SEC G T++S
Sbjct: 902 TQSSECKGVTQSSECKGVTQSSECKGVTQAS 932
Score = 27.1 bits (57), Expect = 7.2
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSS 270
+ + C G A+ C T SEC T+SS
Sbjct: 920 TQSSECKGVTQASECKGVTQSSECKSVTQSS 950
>SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 30.3 bits (65), Expect = 0.77
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 404 GFPPPCPALVSNLASSG-ARCAGERPATCCSSATNFSECSG 285
G+P PAL ++L++ + C G R +CCSS S+ G
Sbjct: 176 GYPHYKPALAASLSTRALSSCPGSRDCSCCSSLYPGSQSIG 216
>SB_32432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 4 GGSNGGLLVAACINQRPDLYGAAVVQVGVLDM 99
GGS+GG L A I Q PD + A + V+D+
Sbjct: 466 GGSHGGFLSAHLIGQYPDKFRACAARNPVIDI 497
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +1
Query: 190 YSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSLKFVAELQHVAGR-----SPAQRA 354
Y +H I+ EYP+ L L +D + ++ H + P +
Sbjct: 565 YRNVHVIRGYDTAADEYPSHLNLFSDEGGTYNSGKQVGYIRNDDHGGVQYSWFAPPKGKR 624
Query: 355 PLLARFDTKAGHGGGKPTTKIIDE 426
P L R +AGHGG TK++++
Sbjct: 625 PFLYRGGRRAGHGGAAEFTKLLED 648
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 107 SRSSR*DTPGSLTTEAPTIRPSSNTC*STRPYTTFSRRARIGP 235
S SS P TT+APT +P+S T +TRP T A P
Sbjct: 6331 SPSSESRIPVGRTTKAPTTKPASKTT-TTRPGTKAGAAATAKP 6372
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 143 TTEAPTIRPSSNTC*STRPYTTFSRRAR 226
++E PT RPSS T + P +F RR R
Sbjct: 552 SSETPTTRPSSETPTTKPPEISFGRRRR 579
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 389 CPALVSNLAS-SGARCAGERPATCCSSATNFSECSGT 282
C + SN+ S +G+ PA+C SSA + CS T
Sbjct: 979 CSSRTSNITSFTGSSGYSSMPASCPSSANSHRSCSPT 1015
>SB_13723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 313 ELQHVAGRSPAQRAPLLARFDTKAGHGGGKPTTKIIDEH 429
EL GRS +P L FDTK K ++ + D+H
Sbjct: 4 ELHRGGGRSRTSGSPGLQEFDTKNQPFASKSSSGVGDDH 42
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 244 PGTRADSRSAAECCVRASTSASIRTGSYCR 155
PG R ++ AE C T + TG CR
Sbjct: 1458 PGCRKETNCHAESCANGGTCVATWTGFQCR 1487
>SB_5158| Best HMM Match : PH (HMM E-Value=0.28)
Length = 502
Score = 26.6 bits (56), Expect = 9.5
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 244 PGTRADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVA 98
P TR+D SA + +T+ + G Y RS RS P+R+ + ++ S A
Sbjct: 170 PSTRSDDISAYQ----PNTTTTPYHGKYLRSSRSVSPKRLSAVSTSSCA 214
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,356,370
Number of Sequences: 59808
Number of extensions: 206282
Number of successful extensions: 746
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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