BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0753 (450 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl p... 35 0.024 Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical pr... 32 0.22 U13070-5|AAC46639.1| 629|Caenorhabditis elegans Dipeptidyl pept... 30 0.89 AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 30 0.89 AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 30 0.89 U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily ass... 29 1.2 U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 29 1.2 Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical pr... 29 1.6 X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. 29 2.1 AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and gl... 29 2.1 AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical ... 28 2.7 Z82093-1|CAB05018.1| 229|Caenorhabditis elegans Hypothetical pr... 28 3.6 Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 27 4.8 Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical p... 27 4.8 AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 27 4.8 AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 27 4.8 Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 27 6.3 U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 27 6.3 Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 8.3 Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 8.3 U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 8.3 >AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl peptidase four (iv)family protein 5 protein. Length = 737 Score = 35.1 bits (77), Expect = 0.024 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%) Frame = +1 Query: 4 GGSNGGLLVAACINQRPDLYGAAVVQVGVLDMLRFQKFTIGHAWVSDYGSSD--NKTQFE 177 GGS+GG LV+ I Q P Y + V V+++ T W G+ + + T+ Sbjct: 590 GGSHGGFLVSHLIGQYPGFYKSCVALNPVVNIATMHDITDIPEWCYFEGTGEYPDWTKIT 649 Query: 178 YLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSLKFVAELQ 321 + + N P + L+L + D RVVP H F+ L+ Sbjct: 650 TTEQREKMFNSSPIAHVENATTPYLLLIGEKDLRVVP-HYRAFIRALK 696 >Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical protein ZK1010.4 protein. Length = 263 Score = 31.9 bits (69), Expect = 0.22 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -3 Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89 A R +CCVR + ++ G C +F QRP RV V C + Sbjct: 190 AQGRDHTQCCVRNGVTTTL-AGQKCLTFCDQRPDRVTKLDYSYVPCYD 236 >U13070-5|AAC46639.1| 629|Caenorhabditis elegans Dipeptidyl peptidase four (iv)family protein 4 protein. Length = 629 Score = 29.9 bits (64), Expect = 0.89 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +1 Query: 4 GGSNGGLLVAACINQRPDLYGAAVVQVGVLDMLRFQKFT 120 G S+GG L+ +C+ ++ AAV GV D+L + T Sbjct: 473 GSSSGGYLILSCLISPKNIIKAAVSVYGVADLLALDEDT 511 >AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodiesterase protein 6, isoformb protein. Length = 697 Score = 29.9 bits (64), Expect = 0.89 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +1 Query: 82 VGVLDMLRFQKFT-IGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL 252 V + L ++F + HA V ++D FEYL K++ +H P E R T+ Sbjct: 590 VNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNSLTI 647 >AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodiesterase protein 6, isoforma protein. Length = 760 Score = 29.9 bits (64), Expect = 0.89 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = +1 Query: 82 VGVLDMLRFQKFT-IGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL 252 V + L ++F + HA V ++D FEYL K++ +H P E R T+ Sbjct: 590 VNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNSLTI 647 >U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily assigned gene nameprotein 150, isoform a protein. Length = 462 Score = 29.5 bits (63), Expect = 1.2 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 338 ERPATCCSSATNFSECSGTTRSSWSADS 255 +RP + S+ +N S CS +TR S S DS Sbjct: 385 QRPKSWASTVSNESSCSSSTRESDSTDS 412 >U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily assigned gene nameprotein 150, isoform b protein. Length = 638 Score = 29.5 bits (63), Expect = 1.2 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 338 ERPATCCSSATNFSECSGTTRSSWSADS 255 +RP + S+ +N S CS +TR S S DS Sbjct: 561 QRPKSWASTVSNESSCSSSTRESDSTDS 588 >Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical protein C34B4.2a protein. Length = 345 Score = 29.1 bits (62), Expect = 1.6 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -2 Query: 365 ASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISV 246 ASSG AG AT + + SECS T+ SS S+ + SV Sbjct: 246 ASSGNSTAGPIRATFGYQSASSSECSSTSSSSASSPAPSV 285 >X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. Length = 402 Score = 28.7 bits (61), Expect = 2.1 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = -2 Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSAT----NFSECSGTTRSSWSAD-SISVAGYS 234 P P V + +GA+C P CS A F E S TT + + + ++S +GYS Sbjct: 228 PRPDACSVKDACLNGAKCFPNGPKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYS 287 >AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and glp-1 phenotype protein2 protein. Length = 402 Score = 28.7 bits (61), Expect = 2.1 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Frame = -2 Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSAT----NFSECSGTTRSSWSAD-SISVAGYS 234 P P V + +GA+C P CS A F E S TT + + + ++S +GYS Sbjct: 228 PRPDACSVKDACLNGAKCFPNGPKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYS 287 >AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical protein F35B3.4 protein. Length = 227 Score = 28.3 bits (60), Expect = 2.7 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = -3 Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89 A + +CC R S ++ G+ C +F QRP V +AC + Sbjct: 126 AQGQDHTDCCYRNSVGTTL-AGNKCFTFCDQRPGNVTQLDLSYLACYD 172 >Z82093-1|CAB05018.1| 229|Caenorhabditis elegans Hypothetical protein ZK39.2 protein. Length = 229 Score = 27.9 bits (59), Expect = 3.6 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Frame = -2 Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSSWSADSIS-VAGY 237 SSG G R T C+ + CS T+ W+ S S AG+ Sbjct: 120 SSGGIWLGARRTTACAKQHKTTSCSTTSSFRWTDSSASGTAGF 162 >Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical protein H27C11.1a protein. Length = 439 Score = 27.5 bits (58), Expect = 4.8 Identities = 14/44 (31%), Positives = 17/44 (38%) Frame = -2 Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267 PPP P LV+ A+ GA C C + C G W Sbjct: 18 PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61 >Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical protein T20G5.13 protein. Length = 237 Score = 27.5 bits (58), Expect = 4.8 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -3 Query: 211 ECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQEL 86 ECC + + ++ G C SF QRP R + + C E+ Sbjct: 164 ECCETSGITTTV-AGRKCLSFCDQRPNRFTPIDASYLPCYEV 204 >AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical protein H27C11.1a protein. Length = 439 Score = 27.5 bits (58), Expect = 4.8 Identities = 14/44 (31%), Positives = 17/44 (38%) Frame = -2 Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267 PPP P LV+ A+ GA C C + C G W Sbjct: 18 PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61 >AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor NHR-97 protein. Length = 439 Score = 27.5 bits (58), Expect = 4.8 Identities = 14/44 (31%), Positives = 17/44 (38%) Frame = -2 Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267 PPP P LV+ A+ GA C C + C G W Sbjct: 18 PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61 >Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical protein F19H6.4 protein. Length = 243 Score = 27.1 bits (57), Expect = 6.3 Identities = 16/63 (25%), Positives = 28/63 (44%) Frame = -2 Query: 350 RCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSGRFSLGG*MLCKGEYFSKYSN 171 R + P ++AT F +G + W+A ++ R +G M C G Y + S+ Sbjct: 94 RSTTKSPVAIVAAATFFCAYNGFLQGYWNAFYQPEEPWTTRKLVGSLMYCTGMYINHKSD 153 Query: 170 WVL 162 +L Sbjct: 154 TIL 156 >U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical protein C42D4.3 protein. Length = 255 Score = 27.1 bits (57), Expect = 6.3 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = -3 Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89 A + CC R + ++ G+ C +F QRP V +AC + Sbjct: 133 AQGKDHTACCARNAVGTTL-AGNKCFTFCDQRPGNVTQLDMSYLACYD 179 >Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein ZK643.8 protein. Length = 774 Score = 26.6 bits (56), Expect = 8.3 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -2 Query: 404 GFPPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSG 231 G P PA + ASSG G A + A SG+ + +A + GYSG Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSG 507 >Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein ZK643.8 protein. Length = 774 Score = 26.6 bits (56), Expect = 8.3 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -2 Query: 404 GFPPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSG 231 G P PA + ASSG G A + A SG+ + +A + GYSG Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSG 507 >U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein C37C3.6b protein. Length = 2167 Score = 26.6 bits (56), Expect = 8.3 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +2 Query: 128 TPGSLTTEAPTIRPSSNTC 184 TPGS ++A RP+SN+C Sbjct: 2110 TPGSAPSDARVSRPTSNSC 2128 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,147,350 Number of Sequences: 27780 Number of extensions: 151563 Number of successful extensions: 518 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 494 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 518 length of database: 12,740,198 effective HSP length: 75 effective length of database: 10,656,698 effective search space used: 788595652 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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