Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0753
(450 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl p... 35 0.024
Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical pr... 32 0.22
U13070-5|AAC46639.1| 629|Caenorhabditis elegans Dipeptidyl pept... 30 0.89
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 30 0.89
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 30 0.89
U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily ass... 29 1.2
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 29 1.2
Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical pr... 29 1.6
X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. 29 2.1
AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and gl... 29 2.1
AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical ... 28 2.7
Z82093-1|CAB05018.1| 229|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical p... 27 4.8
Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical p... 27 4.8
AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical ... 27 4.8
AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear recep... 27 4.8
Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical pr... 27 6.3
U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 8.3
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AF100669-11|AAK39270.2| 737|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 5 protein.
Length = 737
Score = 35.1 bits (77), Expect = 0.024
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +1
Query: 4 GGSNGGLLVAACINQRPDLYGAAVVQVGVLDMLRFQKFTIGHAWVSDYGSSD--NKTQFE 177
GGS+GG LV+ I Q P Y + V V+++ T W G+ + + T+
Sbjct: 590 GGSHGGFLVSHLIGQYPGFYKSCVALNPVVNIATMHDITDIPEWCYFEGTGEYPDWTKIT 649
Query: 178 YLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSLKFVAELQ 321
+ + N P + L+L + D RVVP H F+ L+
Sbjct: 650 TTEQREKMFNSSPIAHVENATTPYLLLIGEKDLRVVP-HYRAFIRALK 696
>Z82083-2|CAB04970.1| 263|Caenorhabditis elegans Hypothetical
protein ZK1010.4 protein.
Length = 263
Score = 31.9 bits (69), Expect = 0.22
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89
A R +CCVR + ++ G C +F QRP RV V C +
Sbjct: 190 AQGRDHTQCCVRNGVTTTL-AGQKCLTFCDQRPDRVTKLDYSYVPCYD 236
>U13070-5|AAC46639.1| 629|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 4 protein.
Length = 629
Score = 29.9 bits (64), Expect = 0.89
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 4 GGSNGGLLVAACINQRPDLYGAAVVQVGVLDMLRFQKFT 120
G S+GG L+ +C+ ++ AAV GV D+L + T
Sbjct: 473 GSSSGGYLILSCLISPKNIIKAAVSVYGVADLLALDEDT 511
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 29.9 bits (64), Expect = 0.89
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 VGVLDMLRFQKFT-IGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL 252
V + L ++F + HA V ++D FEYL K++ +H P E R T+
Sbjct: 590 VNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNSLTI 647
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 29.9 bits (64), Expect = 0.89
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 82 VGVLDMLRFQKFT-IGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL 252
V + L ++F + HA V ++D FEYL K++ +H P E R T+
Sbjct: 590 VNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNSLTI 647
>U97592-2|AAB52870.1| 462|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform a protein.
Length = 462
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 338 ERPATCCSSATNFSECSGTTRSSWSADS 255
+RP + S+ +N S CS +TR S S DS
Sbjct: 385 QRPKSWASTVSNESSCSSSTRESDSTDS 412
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 338 ERPATCCSSATNFSECSGTTRSSWSADS 255
+RP + S+ +N S CS +TR S S DS
Sbjct: 561 QRPKSWASTVSNESSCSSSTRESDSTDS 588
>Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical
protein C34B4.2a protein.
Length = 345
Score = 29.1 bits (62), Expect = 1.6
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -2
Query: 365 ASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISV 246
ASSG AG AT + + SECS T+ SS S+ + SV
Sbjct: 246 ASSGNSTAGPIRATFGYQSASSSECSSTSSSSASSPAPSV 285
>X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -2
Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSAT----NFSECSGTTRSSWSAD-SISVAGYS 234
P P V + +GA+C P CS A F E S TT + + + ++S +GYS
Sbjct: 228 PRPDACSVKDACLNGAKCFPNGPKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYS 287
>AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein2 protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = -2
Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSAT----NFSECSGTTRSSWSAD-SISVAGYS 234
P P V + +GA+C P CS A F E S TT + + + ++S +GYS
Sbjct: 228 PRPDACSVKDACLNGAKCFPNGPKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYS 287
>AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical
protein F35B3.4 protein.
Length = 227
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89
A + +CC R S ++ G+ C +F QRP V +AC +
Sbjct: 126 AQGQDHTDCCYRNSVGTTL-AGNKCFTFCDQRPGNVTQLDLSYLACYD 172
>Z82093-1|CAB05018.1| 229|Caenorhabditis elegans Hypothetical
protein ZK39.2 protein.
Length = 229
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -2
Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSSWSADSIS-VAGY 237
SSG G R T C+ + CS T+ W+ S S AG+
Sbjct: 120 SSGGIWLGARRTTACAKQHKTTSCSTTSSFRWTDSSASGTAGF 162
>Z82259-10|CAD36480.1| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -2
Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267
PPP P LV+ A+ GA C C + C G W
Sbjct: 18 PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61
>Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical
protein T20G5.13 protein.
Length = 237
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -3
Query: 211 ECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQEL 86
ECC + + ++ G C SF QRP R + + C E+
Sbjct: 164 ECCETSGITTTV-AGRKCLSFCDQRPNRFTPIDASYLPCYEV 204
>AL022473-2|CAA18549.2| 439|Caenorhabditis elegans Hypothetical
protein H27C11.1a protein.
Length = 439
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -2
Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267
PPP P LV+ A+ GA C C + C G W
Sbjct: 18 PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61
>AF332211-1|AAK17982.1| 439|Caenorhabditis elegans nuclear receptor
NHR-97 protein.
Length = 439
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = -2
Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267
PPP P LV+ A+ GA C C + C G W
Sbjct: 18 PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61
>Z68115-3|CAA92168.1| 243|Caenorhabditis elegans Hypothetical
protein F19H6.4 protein.
Length = 243
Score = 27.1 bits (57), Expect = 6.3
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = -2
Query: 350 RCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSGRFSLGG*MLCKGEYFSKYSN 171
R + P ++AT F +G + W+A ++ R +G M C G Y + S+
Sbjct: 94 RSTTKSPVAIVAAATFFCAYNGFLQGYWNAFYQPEEPWTTRKLVGSLMYCTGMYINHKSD 153
Query: 170 WVL 162
+L
Sbjct: 154 TIL 156
>U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical
protein C42D4.3 protein.
Length = 255
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -3
Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89
A + CC R + ++ G+ C +F QRP V +AC +
Sbjct: 133 AQGKDHTACCARNAVGTTL-AGNKCFTFCDQRPGNVTQLDMSYLACYD 179
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -2
Query: 404 GFPPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSG 231
G P PA + ASSG G A + A SG+ + +A + GYSG
Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSG 507
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = -2
Query: 404 GFPPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSG 231
G P PA + ASSG G A + A SG+ + +A + GYSG
Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSG 507
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 128 TPGSLTTEAPTIRPSSNTC 184
TPGS ++A RP+SN+C
Sbjct: 2110 TPGSAPSDARVSRPTSNSC 2128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,147,350
Number of Sequences: 27780
Number of extensions: 151563
Number of successful extensions: 518
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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