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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0753
         (450 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-11|AAK39270.2|  737|Caenorhabditis elegans Dipeptidyl p...    35   0.024
Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical pr...    32   0.22 
U13070-5|AAC46639.1|  629|Caenorhabditis elegans Dipeptidyl pept...    30   0.89 
AC024877-4|ABQ13047.1|  697|Caenorhabditis elegans Phosphodieste...    30   0.89 
AC024877-3|AAF60898.1|  760|Caenorhabditis elegans Phosphodieste...    30   0.89 
U97592-2|AAB52870.1|  462|Caenorhabditis elegans Temporarily ass...    29   1.2  
U97592-1|AAB52871.3|  638|Caenorhabditis elegans Temporarily ass...    29   1.2  
Z78059-3|CAB01486.3|  345|Caenorhabditis elegans Hypothetical pr...    29   1.6  
X77495-1|CAA54629.1|  402|Caenorhabditis elegans lag-2 protein.        29   2.1  
AC024205-1|AAF36047.1|  402|Caenorhabditis elegans Lin-12 and gl...    29   2.1  
AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical ...    28   2.7  
Z82093-1|CAB05018.1|  229|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z82259-10|CAD36480.1|  439|Caenorhabditis elegans Hypothetical p...    27   4.8  
Z30423-11|CAD27184.1|  237|Caenorhabditis elegans Hypothetical p...    27   4.8  
AL022473-2|CAA18549.2|  439|Caenorhabditis elegans Hypothetical ...    27   4.8  
AF332211-1|AAK17982.1|  439|Caenorhabditis elegans nuclear recep...    27   4.8  
Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical pr...    27   6.3  
U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>AF100669-11|AAK39270.2|  737|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 5 protein.
          Length = 737

 Score = 35.1 bits (77), Expect = 0.024
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
 Frame = +1

Query: 4   GGSNGGLLVAACINQRPDLYGAAVVQVGVLDMLRFQKFTIGHAWVSDYGSSD--NKTQFE 177
           GGS+GG LV+  I Q P  Y + V    V+++      T    W    G+ +  + T+  
Sbjct: 590 GGSHGGFLVSHLIGQYPGFYKSCVALNPVVNIATMHDITDIPEWCYFEGTGEYPDWTKIT 649

Query: 178 YLLKYSPLHNIQPPSENRPEYPATLILSADHDDRVVPLHSLKFVAELQ 321
              +   + N  P +         L+L  + D RVVP H   F+  L+
Sbjct: 650 TTEQREKMFNSSPIAHVENATTPYLLLIGEKDLRVVP-HYRAFIRALK 696


>Z82083-2|CAB04970.1|  263|Caenorhabditis elegans Hypothetical
           protein ZK1010.4 protein.
          Length = 263

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -3

Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89
           A  R   +CCVR   + ++  G  C +F  QRP RV       V C +
Sbjct: 190 AQGRDHTQCCVRNGVTTTL-AGQKCLTFCDQRPDRVTKLDYSYVPCYD 236


>U13070-5|AAC46639.1|  629|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 4 protein.
          Length = 629

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 4   GGSNGGLLVAACINQRPDLYGAAVVQVGVLDMLRFQKFT 120
           G S+GG L+ +C+    ++  AAV   GV D+L   + T
Sbjct: 473 GSSSGGYLILSCLISPKNIIKAAVSVYGVADLLALDEDT 511


>AC024877-4|ABQ13047.1|  697|Caenorhabditis elegans
           Phosphodiesterase protein 6, isoformb protein.
          Length = 697

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +1

Query: 82  VGVLDMLRFQKFT-IGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL 252
           V +   L  ++F  + HA V    ++D    FEYL K++ +H    P E R     T+
Sbjct: 590 VNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNSLTI 647


>AC024877-3|AAF60898.1|  760|Caenorhabditis elegans
           Phosphodiesterase protein 6, isoforma protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 0.89
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +1

Query: 82  VGVLDMLRFQKFT-IGHAWVSDYGSSDNKTQFEYLLKYSPLHNIQPPSENRPEYPATL 252
           V +   L  ++F  + HA V    ++D    FEYL K++ +H    P E R     T+
Sbjct: 590 VNIFSSLSREEFIQMRHAMVEMVLATDISRHFEYLAKFNKMHVTDVPEEQRDTNSLTI 647


>U97592-2|AAB52870.1|  462|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 150, isoform a protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 338 ERPATCCSSATNFSECSGTTRSSWSADS 255
           +RP +  S+ +N S CS +TR S S DS
Sbjct: 385 QRPKSWASTVSNESSCSSSTRESDSTDS 412


>U97592-1|AAB52871.3|  638|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 150, isoform b protein.
          Length = 638

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 338 ERPATCCSSATNFSECSGTTRSSWSADS 255
           +RP +  S+ +N S CS +TR S S DS
Sbjct: 561 QRPKSWASTVSNESSCSSSTRESDSTDS 588


>Z78059-3|CAB01486.3|  345|Caenorhabditis elegans Hypothetical
           protein C34B4.2a protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -2

Query: 365 ASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISV 246
           ASSG   AG   AT    + + SECS T+ SS S+ + SV
Sbjct: 246 ASSGNSTAGPIRATFGYQSASSSECSSTSSSSASSPAPSV 285


>X77495-1|CAA54629.1|  402|Caenorhabditis elegans lag-2 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = -2

Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSAT----NFSECSGTTRSSWSAD-SISVAGYS 234
           P P    V +   +GA+C    P   CS A      F E S TT +  + + ++S +GYS
Sbjct: 228 PRPDACSVKDACLNGAKCFPNGPKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYS 287


>AC024205-1|AAF36047.1|  402|Caenorhabditis elegans Lin-12 and glp-1
           phenotype protein2 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = -2

Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSAT----NFSECSGTTRSSWSAD-SISVAGYS 234
           P P    V +   +GA+C    P   CS A      F E S TT +  + + ++S +GYS
Sbjct: 228 PRPDACSVKDACLNGAKCFPNGPKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYS 287


>AC006633-3|AAK68375.1|  227|Caenorhabditis elegans Hypothetical
           protein F35B3.4 protein.
          Length = 227

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -3

Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89
           A  +   +CC R S   ++  G+ C +F  QRP  V       +AC +
Sbjct: 126 AQGQDHTDCCYRNSVGTTL-AGNKCFTFCDQRPGNVTQLDLSYLACYD 172


>Z82093-1|CAB05018.1|  229|Caenorhabditis elegans Hypothetical
           protein ZK39.2 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 362 SSGARCAGERPATCCSSATNFSECSGTTRSSWSADSIS-VAGY 237
           SSG    G R  T C+     + CS T+   W+  S S  AG+
Sbjct: 120 SSGGIWLGARRTTACAKQHKTTSCSTTSSFRWTDSSASGTAGF 162


>Z82259-10|CAD36480.1|  439|Caenorhabditis elegans Hypothetical
           protein H27C11.1a protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -2

Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267
           PPP P LV+  A+ GA C       C       + C G     W
Sbjct: 18  PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61


>Z30423-11|CAD27184.1|  237|Caenorhabditis elegans Hypothetical
           protein T20G5.13 protein.
          Length = 237

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -3

Query: 211 ECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQEL 86
           ECC  +  + ++  G  C SF  QRP R     +  + C E+
Sbjct: 164 ECCETSGITTTV-AGRKCLSFCDQRPNRFTPIDASYLPCYEV 204


>AL022473-2|CAA18549.2|  439|Caenorhabditis elegans Hypothetical
           protein H27C11.1a protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -2

Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267
           PPP P LV+  A+ GA C       C       + C G     W
Sbjct: 18  PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61


>AF332211-1|AAK17982.1|  439|Caenorhabditis elegans nuclear receptor
           NHR-97 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = -2

Query: 398 PPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSW 267
           PPP P LV+  A+ GA C       C       + C G     W
Sbjct: 18  PPPSPPLVNEKAAIGALCVVCGDRACSHLYYGVAACHGCKCFFW 61


>Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical
           protein F19H6.4 protein.
          Length = 243

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 16/63 (25%), Positives = 28/63 (44%)
 Frame = -2

Query: 350 RCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSGRFSLGG*MLCKGEYFSKYSN 171
           R   + P    ++AT F   +G  +  W+A       ++ R  +G  M C G Y +  S+
Sbjct: 94  RSTTKSPVAIVAAATFFCAYNGFLQGYWNAFYQPEEPWTTRKLVGSLMYCTGMYINHKSD 153

Query: 170 WVL 162
            +L
Sbjct: 154 TIL 156


>U41991-7|AAA83347.1|  255|Caenorhabditis elegans Hypothetical
           protein C42D4.3 protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = -3

Query: 232 ADSRSAAECCVRASTSASIRTGSYCRSFRSQRPRRVLS*TSGSVACQE 89
           A  +    CC R +   ++  G+ C +F  QRP  V       +AC +
Sbjct: 133 AQGKDHTACCARNAVGTTL-AGNKCFTFCDQRPGNVTQLDMSYLACYD 179


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -2

Query: 404 GFPPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSG 231
           G   P PA  +  ASSG    G   A   + A      SG+  +  +A +    GYSG
Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSG 507


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -2

Query: 404 GFPPPCPALVSNLASSGARCAGERPATCCSSATNFSECSGTTRSSWSADSISVAGYSG 231
           G   P PA  +  ASSG    G   A   + A      SG+  +  +A +    GYSG
Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSEAAPEAAPAAPSGGYSG 507


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
            C37C3.6b protein.
          Length = 2167

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 128  TPGSLTTEAPTIRPSSNTC 184
            TPGS  ++A   RP+SN+C
Sbjct: 2110 TPGSAPSDARVSRPTSNSC 2128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,147,350
Number of Sequences: 27780
Number of extensions: 151563
Number of successful extensions: 518
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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