Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0747
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical pr... 30 1.6
L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 29 2.2
Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical p... 29 3.8
AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical... 28 5.0
Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical pr... 28 6.6
>L14745-4|AAA27921.1| 419|Caenorhabditis elegans Hypothetical
protein C02F5.6a protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 522 SLGAQILGHAGDEFMRLGFERIQRIXALDPAGPLLFRT 635
S+G Q+LG A F+R ER I A++ P+L R+
Sbjct: 158 SIGQQLLGKAESIFLRKHLERNAEILAVETGLPVLMRS 195
>L14745-3|AAM15539.1| 450|Caenorhabditis elegans Hypothetical
protein C02F5.6b protein.
Length = 450
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 522 SLGAQILGHAGDEFMRLGFERIQRIXALDPAGPLLFRT 635
S+G Q+LG A F+R ER I A++ P+L R+
Sbjct: 158 SIGQQLLGKAESIFLRKHLERNAEILAVETGLPVLMRS 195
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +3
Query: 180 KNEVKTFTIDEAANGILSYPNLDKNKKFITFVGGFKSQIHKRTEEQIRDAFRTVPNSYLI 359
K +K T EA IL+Y K+ + +GG+ + +T + I A + ++Y+I
Sbjct: 240 KQSIKHRTSSEACAQILNYFKTLLQKQEVQVLGGYAPVLQLKTNKDIEYASLCIVHNYVI 299
Query: 360 MLD 368
+ +
Sbjct: 300 LAE 302
>Z93378-7|CAB07587.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 168 YDFSKNEVKTFTIDEAANGILSYPNLDKNKKFITFVGGFKSQIHKRTEEQIRDAFRT 338
YD +VKT + EAA S PN+ K+KK G F+ R +++ D RT
Sbjct: 534 YDIEGAKVKTNLLFEAATTANSIPNILKDKK----CGAFEKLQEDRFQKEAADYKRT 586
>Z93375-5|CAB07566.1| 605|Caenorhabditis elegans Hypothetical
protein C38C6.6 protein.
Length = 605
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 168 YDFSKNEVKTFTIDEAANGILSYPNLDKNKKFITFVGGFKSQIHKRTEEQIRDAFRT 338
YD +VKT + EAA S PN+ K+KK G F+ R +++ D RT
Sbjct: 534 YDIEGAKVKTNLLFEAATTANSIPNILKDKK----CGAFEKLQEDRFQKEAADYKRT 586
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 202 PSMKQLTASSHTQTWIKTRNSSPSLVASNHKSTNVPRNKSEMLSELYRTVI*SCWIILYT 381
P ++QL + W+ + ++SPS + + + + + LSEL RT++ S + Y
Sbjct: 107 PVLEQLEHMIISDDWLGSESTSPSGLKQHAQVAKTRSREGQKLSELGRTLVTSASLKSYI 166
Query: 382 PTIS 393
+S
Sbjct: 167 DLLS 170
>Z22179-14|CAI06052.1| 443|Caenorhabditis elegans Hypothetical
protein F58A4.14 protein.
Length = 443
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 159 VYFYDFSKNEVKTFTIDEAANGILSYPNLDKNKKFITFVG 278
+Y + K + KTF E+A IL P++ K+ I F+G
Sbjct: 167 IYHFPAEKVQGKTFNPVESARTILMKPDIAKDATLICFLG 206
>AL110485-29|CAB60376.3| 732|Caenorhabditis elegans Hypothetical
protein Y46G5A.10 protein.
Length = 732
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 163 ISTTFPRTR*KRLPSMKQLTASSHTQTWIKTRNSSPSLVASNHKSTNVPRNKSEMLSE 336
++ P+T R+PS + HT T + + S++ H+ VP ++S+ L +
Sbjct: 322 VTDNIPKTSTSRIPSSENPKTMEHTTT-SRRFPTQTSILRKEHEIVQVPLHRSQSLRQ 378
>Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical
protein C14C10.3b protein.
Length = 674
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 204 IDEAANGILS-YPNL--DKNKKFITFVGGFKSQIHKRTEEQIRDAFRTVPNSYL 356
+DEA +G+L + + K KKF+ K +IH+ EEQ+ + + + ++++
Sbjct: 587 LDEAVHGVLDKFYGIGGQKTKKFVE--KNIKKKIHRVDEEQLHELCKAIQSAWI 638
>Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical
protein C14C10.3a protein.
Length = 677
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 204 IDEAANGILS-YPNL--DKNKKFITFVGGFKSQIHKRTEEQIRDAFRTVPNSYL 356
+DEA +G+L + + K KKF+ K +IH+ EEQ+ + + + ++++
Sbjct: 590 LDEAVHGVLDKFYGIGGQKTKKFVE--KNIKKKIHRVDEEQLHELCKAIQSAWI 641
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,072,981
Number of Sequences: 27780
Number of extensions: 353343
Number of successful extensions: 1022
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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