Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0746
(600 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 334 2e-92
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 326 6e-90
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 325 2e-89
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 260 6e-70
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 147 5e-36
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 3e-34
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 8e-26
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 8e-23
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 85 3e-17
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 83 2e-16
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 0.94
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 30 1.6
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 1.6
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 2.2
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 29 2.2
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.2
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 29 2.2
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 2.2
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 5.0
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 5.0
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 28 6.6
SB_12744| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 28 6.6
SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3) 28 6.6
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.6
SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4) 27 8.8
SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 27 8.8
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 27 8.8
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 27 8.8
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3) 27 8.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 334 bits (822), Expect = 2e-92
Identities = 161/184 (87%), Positives = 174/184 (94%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 180
KMKET EAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGL
Sbjct: 126 KMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGL 185
Query: 181 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 360
DKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGEDFDN+MV+HFV++F
Sbjct: 186 DKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGEDFDNKMVDHFVKQF 245
Query: 361 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 540
K+KYKKD+ NKRA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL
Sbjct: 246 KQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 305
Query: 541 NADL 552
N DL
Sbjct: 306 NQDL 309
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 326 bits (802), Expect = 6e-90
Identities = 156/185 (84%), Positives = 174/185 (94%), Gaps = 1/185 (0%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 180
KMKET EAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGL
Sbjct: 126 KMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGL 185
Query: 181 DKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFVQE 357
DK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGEDFDNR+VNHFV E
Sbjct: 186 DKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGEDFDNRLVNHFVAE 245
Query: 358 FKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 537
FKRKYKKD++ N RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+
Sbjct: 246 FKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFED 305
Query: 538 LNADL 552
L +DL
Sbjct: 306 LCSDL 310
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 325 bits (798), Expect = 2e-89
Identities = 158/184 (85%), Positives = 170/184 (92%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 180
KMKET EAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGL
Sbjct: 219 KMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGL 278
Query: 181 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 360
DKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGEDFDN MV+ FV++F
Sbjct: 279 DKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGEDFDNNMVDFFVKQF 338
Query: 361 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 540
K+KYKKD+ NKRALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+
Sbjct: 339 KQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEM 398
Query: 541 NADL 552
NA L
Sbjct: 399 NAHL 402
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 111
KMKET EAYLG V +AV+TVPAYFNDSQRQATKDAG
Sbjct: 151 KMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 260 bits (637), Expect = 6e-70
Identities = 122/184 (66%), Positives = 153/184 (83%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 180
KMKET EAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 181 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 360
DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGEDFD ++ HF++ +
Sbjct: 884 DKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQNVMEHFIKLY 942
Query: 361 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 540
K+K K++ + RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEEL
Sbjct: 943 KKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEEL 1002
Query: 541 NADL 552
NA L
Sbjct: 1003 NAKL 1006
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 147 bits (357), Expect = 5e-36
Identities = 81/189 (42%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 180
K++ E L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL
Sbjct: 156 KLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGL 215
Query: 181 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 360
KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+DF+ R + + +Q
Sbjct: 216 HKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQDFNARFMQYLLQLI 274
Query: 361 KRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIE--IDSLFEG---IDFYTSITRA 525
+++ + L T ++RLR E AK L+ + + +I+ + SL EG + F +I+R
Sbjct: 275 HKRFNRQL-TCSEDIQRLRQEVEAAKINLTRTNEVTIKLMLPSLSEGKKIVKFKETISRK 333
Query: 526 RFEELNADL 552
FE +N DL
Sbjct: 334 MFETINEDL 342
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 141 bits (342), Expect = 3e-34
Identities = 76/191 (39%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 180
++K T E L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+
Sbjct: 183 RLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGI 242
Query: 181 DKKGTGE---RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 351
K+ RNV+ D+G + V I G +V STA + +LGG DFD +V HF
Sbjct: 243 YKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLGGRDFDYVLVEHFA 302
Query: 352 QEFKRKYKKDLATNKRALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRAR 528
QEFK KYK D+ ++ +A +L CE+ K+ +S++T + I I+ E D + + RA+
Sbjct: 303 QEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQ 362
Query: 529 FEELNADLVQV 561
FEEL ADL+++
Sbjct: 363 FEELAADLLKL 373
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 113 bits (273), Expect = 8e-26
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Frame = +1
Query: 208 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 387
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 388 TNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLV 555
+ AL+RLR A E+AK LSSS Q I + + ++R++FE L ADL+
Sbjct: 62 KDSMALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADLI 121
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 103 bits (248), Expect = 8e-23
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 18/208 (8%)
Frame = +1
Query: 19 EAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK--- 189
E + +++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++
Sbjct: 98 EQFADHPIKDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSF 157
Query: 190 -GTGERNVLIFDLGGGTFDVSIL------TIEDGIFE------VKSTAGDTHLGGEDFDN 330
T E++ + +D+G + +I+ T + GI E +K D LGG D
Sbjct: 158 NDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQLVIKGIGFDRTLGGHAIDM 217
Query: 331 RMVNHFVQEFKR--KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDF 504
R+ +H VQ FK+ K+K ++ + RA+ + R K+ LS++ + +I+ +F+G DF
Sbjct: 218 RLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDF 277
Query: 505 YTSITRARFEELNADLVQVYHGASGRXL 588
+TR EE+ DL G R L
Sbjct: 278 RVKVTREELEEMCQDLFDRVAGPVNRAL 305
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 85.4 bits (202), Expect = 3e-17
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Frame = +1
Query: 199 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 366
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 367 -KYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 522
K+K D TNKR+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 213 WKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 82.6 bits (195), Expect = 2e-16
Identities = 52/95 (54%), Positives = 61/95 (64%), Gaps = 26/95 (27%)
Frame = +1
Query: 1 KMKETVEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN----------------- 129
++K EA+LG+ V+ AVITVPA+FND+QRQATKDAGTI+GL+
Sbjct: 25 QLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRR 84
Query: 130 -------VLRIINEPTAAAIAYGLDKK--GTGERN 207
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 85 RPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 157 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 324
A A L +G E + D G GT VS + +E+G +++ D H+ G F
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 205 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 324
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = +1
Query: 145 NEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 324
N P A + GT E +I DLG G + + + E G V +TH+ G F
Sbjct: 3007 NAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIPGSPF 3065
Query: 325 DNRM 336
R+
Sbjct: 3066 KIRV 3069
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 345 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 437
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 0.94
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 208 VLIFDLGGGTFDVSILTIEDGIFEVK 285
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 336 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 425
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 359 NSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS 180
N+ +L +L P KW P D +S P V + + PP S + PF+S
Sbjct: 346 NALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPRDGSAKPATQPFVS 404
Query: 179 RP 174
+P
Sbjct: 405 QP 406
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 214 IFDLGGGTFDVSILTIEDGIFEV 282
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 218 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 361
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 117 DGTCIFCGLSLRVIEVRGNRDNCILHSFAKISFDSF 10
+G C+ C SL V+ V G R+ SF K D+F
Sbjct: 293 NGPCVVCNNSLTVVFVVGGRNFTAKKSFIKAVIDNF 328
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 305 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 189
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 345 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGK 437
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 287 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPTREL 403
PPPA T E L T +W+ T S + R KRT LPT L
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPTAAL 474
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 291 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 124
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 123 ---ARDGTC 106
AR TC
Sbjct: 345 VYNARISTC 353
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/75 (29%), Positives = 32/75 (42%)
Frame = -2
Query: 350 TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 171
+ W+ KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 170 AIAAAVGSLMIRRTF 126
A+ A+ SL++ F
Sbjct: 1302 AVNVAISSLVLPSLF 1316
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 221 TSAAVPSTCPSLPSRMVSSR*NPPPATP 304
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 345 LCPGVQEEIQKGPRYQQESS*AFAYCM 425
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 345 LCPGVQEEIQKGPRYQQESS*AFAYCM 425
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +1
Query: 331 RMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYT 510
+ +N + +++K A R + +A T+SS + +I L E + YT
Sbjct: 198 QFINSTNSKTLEEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYT 257
Query: 511 SITRARFEELNADLVQVYHGASGRXL 588
+ T R +++ AD+ H G+ L
Sbjct: 258 NRTMERIDQIKADMT-AGHSQIGQDL 282
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 344 WLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP 174
+ +L P KW D T I +V PPPR + + +PF+S+P
Sbjct: 558 YFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRDGTAKL-ATLPFVSQP 613
>SB_12744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = +1
Query: 319 DFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGI 498
D ++ +H+ K + ++ T R+ T ER + T SSTQ +F G
Sbjct: 79 DMVRKIESHYNNLQKLLLEIEVLTKVNKTRK-PTRLERGEVTTESSTQTGFFCPEVFRGS 137
Query: 499 DFYTSITRARFEELNADLVQVYHGASG 579
+ R FE N ++ SG
Sbjct: 138 TYGYPFYRKGFEVTNCTTIKSRRSVSG 164
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 40 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 198
+ NA +T+P YF + +K G G+ + +++ I+Y LD+K TG
Sbjct: 1020 IYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSKERNQEISYKLDRKWTG 1070
>SB_46921| Best HMM Match : Endomucin (HMM E-Value=6.3)
Length = 312
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +2
Query: 239 STCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLPTREL 403
S CPSLP+ S TP + TI T + SS T TS PT ++
Sbjct: 46 SLCPSLPTSSTHSTSPTVQTTPAFTTSPATILPPTAKTTSS---TSSTSKPTEDV 97
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 216 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 130
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4)
Length = 721
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +1
Query: 268 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTL 447
G ++ K T GD DF ++ HF + K ++D A +R A R + T+
Sbjct: 479 GQYKSKHTFGDLSCCLSDFGCQIDRHFFETSHAKGEQD-AAGANIKQRATLAVIRGRATI 537
Query: 448 SSSTQASIEIDSLF 489
S+ Q + S F
Sbjct: 538 KSAKQLHDYLSSKF 551
>SB_30476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +1
Query: 292 AGDTHLGGEDFD---NRMVNHFVQEF 360
AGD +GGEDFD +V+ F++ F
Sbjct: 19 AGDNDIGGEDFDVMSKSVVSRFIRHF 44
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 448 SSSTQASIEIDSLFEGIDFYTSITRARFEELNADLVQVYHGASGR 582
SSS+ AS+ SLF ++F +++ E L A YH A+G+
Sbjct: 623 SSSSSASLGYFSLFSSVNFLAAVS---VERLVAVAFPFYHRATGK 664
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 277 EVKSTAGDTHLGGEDFDNRMVNHFVQEFK 363
EVK T+GD + E DN + H ++ FK
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFK 49
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 345 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 446
LCP ++ + GP +++E AFA C+ D+
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 235
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 345 LCPGVQEEIQKGPRYQQESS*AFAYCM*EGKEDL 446
LCP ++ + GP +++E AFA C+ D+
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 173
>SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3)
Length = 485
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 293 AVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPF 186
+V S+IP S + VPPPRS ++ +P PF
Sbjct: 43 SVQIDSQIPGSTFQTVLHPVPPPRS-VAMDNAPKPF 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.369
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,557,714
Number of Sequences: 59808
Number of extensions: 410929
Number of successful extensions: 1622
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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