Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0744
         (450 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p pro...    29   2.2  
AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA...    29   2.2  
AY058553-1|AAL13782.1| 1222|Drosophila melanogaster LD24737p pro...    27   8.8  
AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556...    27   8.8  
AE014298-2012|AAF48355.2|  534|Drosophila melanogaster CG32604-P...    27   8.8  
AE014298-2010|AAF48351.2| 1222|Drosophila melanogaster CG32604-P...    27   8.8  
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA...    27   8.8  

>AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p
           protein.
          Length = 1242

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 99  LVTLPADHVSALHYAGRCGRTGPSRVRR 182
           LV  P    +A   AGR GRTGP +  R
Sbjct: 895 LVVTPISQAAAKQRAGRAGRTGPGKTYR 922


>AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA
           protein.
          Length = 1242

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 99  LVTLPADHVSALHYAGRCGRTGPSRVRR 182
           LV  P    +A   AGR GRTGP +  R
Sbjct: 895 LVVTPISQAAAKQRAGRAGRTGPGKTYR 922


>AY058553-1|AAL13782.1| 1222|Drosophila melanogaster LD24737p
           protein.
          Length = 1222

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 18  VYVV*DGTCVIVCCFECFNRIILSDRVLVTLPADHVSALHYAGRCGRTGPSRVRR 182
           +YV+  G C +    + +N  I  D + +  P    +A   +GR GRTGP +  R
Sbjct: 820 IYVIDSGYCKL----KVYNPRIGMDALQI-YPISQANANQRSGRAGRTGPGQAYR 869


>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
           protein.
          Length = 1028

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 111 PADHVSALHYAGRCGRTG 164
           P DHV+ LH  GR GR G
Sbjct: 350 PQDHVTYLHRIGRAGRFG 367


>AE014298-2012|AAF48355.2|  534|Drosophila melanogaster CG32604-PB,
           isoform B protein.
          Length = 534

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 18  VYVV*DGTCVIVCCFECFNRIILSDRVLVTLPADHVSALHYAGRCGRTGPSRVRR 182
           +YV+  G C +    + +N  I  D + +  P    +A   +GR GRTGP +  R
Sbjct: 132 IYVIDSGYCKL----KVYNPRIGMDALQI-YPISQANANQRSGRAGRTGPGQAYR 181


>AE014298-2010|AAF48351.2| 1222|Drosophila melanogaster CG32604-PA,
           isoform A protein.
          Length = 1222

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 18  VYVV*DGTCVIVCCFECFNRIILSDRVLVTLPADHVSALHYAGRCGRTGPSRVRR 182
           +YV+  G C +    + +N  I  D + +  P    +A   +GR GRTGP +  R
Sbjct: 820 IYVIDSGYCKL----KVYNPRIGMDALQI-YPISQANANQRSGRAGRTGPGQAYR 869


>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
           protein.
          Length = 1028

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +3

Query: 111 PADHVSALHYAGRCGRTG 164
           P DHV+ LH  GR GR G
Sbjct: 350 PQDHVTYLHRIGRAGRFG 367


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,839,448
Number of Sequences: 53049
Number of extensions: 220918
Number of successful extensions: 568
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)