Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0741
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17; E...   223   2e-57
UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8; Coel...   109   7e-23
UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus l...    75   1e-12
UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;...    68   2e-10
UniRef50_UPI0000E810D0 Cluster: PREDICTED: hypothetical protein;...    36   1.1  
UniRef50_A6RGP8 Cluster: Predicted protein; n=1; Ajellomyces cap...    35   1.9  
UniRef50_A7SIV2 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.9  
UniRef50_A7SM44 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.8  

>UniRef50_P50239 Cluster: Ecdysone-inducible protein E75; n=17;
           Endopterygota|Rep: Ecdysone-inducible protein E75 -
           Galleria mellonella (Wax moth)
          Length = 711

 Score =  223 bits (546), Expect = 2e-57
 Identities = 116/188 (61%), Positives = 122/188 (64%), Gaps = 1/188 (0%)
 Frame = +3

Query: 3   HKELLRQQMWNEEEGVSWADSVVEESARXXXXXXXXXXXXXXXXDCGTPXXXXXXXXXXX 182
           HKELLRQQMW E+EG  WADS  ++SAR                DCGTP           
Sbjct: 385 HKELLRQQMWVEDEGALWADSGADDSARSPIGSVSSSESSETTGDCGTPLLAATLAGRRR 444

Query: 183 XDSRGSVDEEALGVAHLAHNGLXXXXXXXXXXYRKLDSPTDSGIESGNEKHEXXXXXXXX 362
            DSRGSVDEEALGVAHLAHNGL          YRKLDSPTDSGIESGNEKHE        
Sbjct: 445 LDSRGSVDEEALGVAHLAHNGLTVTPVRPPPRYRKLDSPTDSGIESGNEKHERIVGPESG 504

Query: 363 XXXXXXXLEEHTEDRRPTAPADDMPVLKRVLQAPPLYGGTSTLMDETYKPHKKFRAMRRD 542
                  LEEH++DRRP APADDMPVLKRVLQAPPLY   S+LMDE YKPHKKFRAMRRD
Sbjct: 505 CSSPRSSLEEHSDDRRPIAPADDMPVLKRVLQAPPLY-DASSLMDEAYKPHKKFRAMRRD 563

Query: 543 T-GEAXAR 563
           T  EA AR
Sbjct: 564 TWSEAEAR 571


>UniRef50_Q0JRL0 Cluster: Ecdysone-induced protein 75C; n=8;
            Coelomata|Rep: Ecdysone-induced protein 75C - Aedes
            aegypti (Yellowfever mosquito)
          Length = 1134

 Score =  109 bits (261), Expect = 7e-23
 Identities = 67/131 (51%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
 Frame = +3

Query: 189  SRGSVDEEAL--GVAHLAHNGLXXXXXXXXXX-----YRKLDSPTDSGIESGNEKHE--X 341
            S GS  E+ +  G AHLA NGL               YRKLDSPTDSGIESGNEKH+   
Sbjct: 686  SSGSSAEDDIIGGTAHLAQNGLTITPVIRSVGTHHVRYRKLDSPTDSGIESGNEKHDHKP 745

Query: 342  XXXXXXXXXXXXXXLEEHTEDRRPTAPADDMPVLKRVLQAPPLYGGTSTLMDETYKPHKK 521
                          LE+ ++D+R     ++MPVLKRVLQAPPLY  T++LMDE YKPHKK
Sbjct: 746  VSSGSSSCSSPRSSLEDQSDDKRHI--VENMPVLKRVLQAPPLY-DTNSLMDEAYKPHKK 802

Query: 522  FRAMRRDTGEA 554
            FRAMR    EA
Sbjct: 803  FRAMRHRESEA 813


>UniRef50_Q3I5Q8 Cluster: E75 nuclear receptor; n=1; Gecarcinus
           lateralis|Rep: E75 nuclear receptor - Gecarcinus
           lateralis (Blackback land crab)
          Length = 828

 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 41/87 (47%), Positives = 51/87 (58%)
 Frame = +3

Query: 282 RKLDSPTDSGIESGNEKHEXXXXXXXXXXXXXXXLEEHTEDRRPTAPADDMPVLKRVLQA 461
           RK DSP DSGIESG ++ +                E+  EDR      +DM VL+R LQA
Sbjct: 482 RKSDSPDDSGIESGTDRSDKLSSPSVCSSPRSSIDEKSEEDRE-----EDMSVLRRALQA 536

Query: 462 PPLYGGTSTLMDETYKPHKKFRAMRRD 542
           PP+   T  LM+E YKPHKKFRA+RR+
Sbjct: 537 PPIIN-TDLLMEEAYKPHKKFRALRRE 562


>UniRef50_P13055 Cluster: Ecdysone-induced protein 75B isoform B;
            n=10; Coelomata|Rep: Ecdysone-induced protein 75B isoform
            B - Drosophila melanogaster (Fruit fly)
          Length = 1412

 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 3/48 (6%)
 Frame = +3

Query: 426  DDMPVLKRVLQAPPLYGGTSTLMDETYKPHKKFRAMRR---DTGEAXA 560
            +DMPVLKRVLQAPPLY  T++LMDE YKPHKKFRA+R    +T EA A
Sbjct: 1066 EDMPVLKRVLQAPPLYD-TNSLMDEAYKPHKKFRALRHREFETAEADA 1112



 Score = 44.4 bits (100), Expect = 0.002
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +3

Query: 279  YRKLDSPTDSGIESGNEKHE 338
            YRKLDSPTDSGIESGNEK+E
Sbjct: 981  YRKLDSPTDSGIESGNEKNE 1000


>UniRef50_UPI0000E810D0 Cluster: PREDICTED: hypothetical protein;
           n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 240

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
 Frame = -2

Query: 517 LCGL*VSSINVEVPPYKGGA*STRLSTGMSSAGAVGRLSSVCSSKDD--RGLEQPDPGPI 344
           LC    +S +   PP       +RLS+     G  GR  +VC ++    RGL+Q +P P+
Sbjct: 127 LCSATAASASPPPPPPAPLRRRSRLSSAGGRGGGAGRADNVCRARGSARRGLQQREPLPL 186

Query: 343 ILS--CFSLPDSIP 308
             S   FS P S+P
Sbjct: 187 PRSGAAFSPPLSLP 200


>UniRef50_A6RGP8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 932

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/83 (25%), Positives = 36/83 (43%)
 Frame = -3

Query: 366 NNPTRVRLSSRVSHCQIQYPNQSGNPTSDTGEEGGRASR*VRCELDVRRRELLHRQSPES 187
           ++P   +L +  +   ++ P+ S  P +D G  GGR+ R  +    + R  +   +SPES
Sbjct: 37  HHPLTNQLDTSHAPTSLRSPHHSTPPDTDLGLLGGRSERNTKRGQKIPRGRMSSSRSPES 96

Query: 186 QVAGDRPTLLPVKECHSHSAPPR 118
           Q     P   P       +A  R
Sbjct: 97  QATNATPAYAPHPHASDDAAGDR 119


>UniRef50_A7SIV2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1029

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 20/86 (23%), Positives = 35/86 (40%)
 Frame = -3

Query: 348 RLSSRVSHCQIQYPNQSGNPTSDTGEEGGRASR*VRCELDVRRRELLHRQSPESQVAGDR 169
           R     + C   +     +P S T   G + SR V C  +       +   P+S   G +
Sbjct: 602 RQDCETATCTASWYTTEWSPCSATCGRGTQ-SRSVICRRETFTGSKQYETLPDSSCTGSK 660

Query: 168 PTLLPVKECHSHSAPPRTRCWIQTRW 91
           PT+   ++C+  + PP    W+ + W
Sbjct: 661 PTVTLTQKCNKVNCPPE---WVPSDW 683


>UniRef50_A7SM44 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1022

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 20/78 (25%), Positives = 33/78 (42%)
 Frame = -3

Query: 324  CQIQYPNQSGNPTSDTGEEGGRASR*VRCELDVRRRELLHRQSPESQVAGDRPTLLPVKE 145
            C   +     +P S T  +G + SR V C  +       +   P++   G +PT+   +E
Sbjct: 797  CVSSWYTTEWSPCSATCGKGTQ-SRSVICRRETFTGSKQYETLPDASCTGSKPTVTLNQE 855

Query: 144  CHSHSAPPRTRCWIQTRW 91
            C+    PP    W+ T W
Sbjct: 856  CNKVDCPPE---WMPTEW 870


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,593,784
Number of Sequences: 1657284
Number of extensions: 11355873
Number of successful extensions: 32927
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32891
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)