Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0741
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    26   1.2  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           25   2.1  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   8.4  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    23   8.4  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   8.4  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = -3

Query: 303 QSGNPTSDTGEEGGRASR*VRCELDVRRRELLHRQSPESQVAGDRPTLLPVKECHSHSAP 124
           Q GNP  D       ++R VRC    R   ++ R +P S       T  PV      S P
Sbjct: 15  QIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQAST-CPVPCSSIWSRP 73

Query: 123 PRTRC 109
              RC
Sbjct: 74  SSMRC 78


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 542 VAPHSAEFLMWFVGFIHQCRSSAVQRWSLKHTFEHG 435
           +AP   ++ +W  G I    S+    W  KH ++ G
Sbjct: 331 IAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEG 366


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 403 TDGPPRPPMTCPCSNVCFR 459
           TDG PR P+     N C R
Sbjct: 86  TDGKPREPLCTRLRNCCTR 104


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 403 TDGPPRPPMTCPCSNVCFR 459
           TDG PR P+     N C R
Sbjct: 86  TDGKPREPLCTRLRNCCTR 104


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 500 FIHQCRSSAVQRWSLKHTF 444
           F H    +AV+RWS  H F
Sbjct: 139 FGHSLLPTAVERWSKAHKF 157


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 394 TPRTDGPPRPPMTCPCSNVCFRLHL 468
           +PRT   P PP+  P S   F L L
Sbjct: 164 SPRTTTTPEPPLADPNSMHLFALTL 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,675
Number of Sequences: 2352
Number of extensions: 11063
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)