Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0739
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   4.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   6.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   6.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 188 RYKSFINKAY*I*TIPSISEWTTYILIV 105
           R+K+ IN    I T+PS  +W   +LI+
Sbjct: 363 RHKTDIN----ITTVPSEQQWGILVLII 386


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 306 EGTEVGVFQRAPDLL 262
           + TE G+F+ AP+LL
Sbjct: 80  KNTEPGMFRVAPELL 94


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 30  YVPSIFYCI 4
           YVP I YC+
Sbjct: 329 YVPMILYCV 337


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 30 YVPSIFYCI 4
          YVP I YC+
Sbjct: 54 YVPMILYCV 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,880
Number of Sequences: 336
Number of extensions: 1428
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)