BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0739 (350 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 34 0.027 01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 33 0.048 02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 33 0.063 04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 32 0.11 02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 32 0.11 06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 32 0.15 04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 31 0.34 05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 29 1.0 08_02_1155 - 24756414-24756836 28 2.4 10_08_0428 + 17842370-17842633,17842835-17842971,17843609-17844314 27 5.5 04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 27 5.5 06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 26 7.2 03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 26 7.2 12_02_0396 + 18577574-18578056,18578094-18578723 26 9.6 10_01_0236 + 2486371-2486952 26 9.6 07_03_0797 + 21575948-21576042,21576140-21576902,21577134-215773... 26 9.6 04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 26 9.6 01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 26 9.6 >04_04_1183 - 31537196-31537290,31537665-31537986,31538176-31538277, 31538826-31539071,31539385-31539506,31539588-31540344, 31540447-31540770,31540872-31541052,31541208-31541602, 31541877-31541942,31542225-31542377,31542593-31542691, 31542776-31542982,31543432-31543572,31543852-31544019, 31544302-31544395,31544479-31544585,31545140-31545274, 31545549-31545656,31545975-31546049,31546197-31546262, 31546500-31546556,31546678-31546702,31546809-31546889, 31546966-31547080,31547211-31547370,31547444-31547483, 31547599-31547780,31547905-31548234 Length = 1650 Score = 34.3 bits (75), Expect = 0.027 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345 +PF ++D ++W ALE AHL+ + GL EV+ Sbjct: 1363 DPFNEHNDADLWEALERAHLKDVIRRNALGLDAEVS 1398 >01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275, 14324349-14324654,14324841-14325055,14325551-14325845, 14325965-14326129,14326324-14327352,14333553-14333814, 14334135-14334631,14338714-14340123 Length = 1527 Score = 33.5 bits (73), Expect = 0.048 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330 +P + YSD+EIW+ALE L+ V P L Sbjct: 1381 DPLQLYSDDEIWQALERCQLKDAVTSKPEKL 1411 >02_02_0492 - 10907529-10907629,10907714-10907953,10908035-10908098, 10908416-10908721,10909347-10909561,10909656-10909950, 10910493-10910597,10911112-10911180,10911433-10911519, 10911953-10913704,10914964-10915054,10915217-10915488 Length = 1198 Score = 33.1 bits (72), Expect = 0.063 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHL 297 +P E YSDE+IW AL+ HL Sbjct: 1052 DPLEEYSDEQIWEALDSCHL 1071 >04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982, 7265088-7265393,7265652-7265866,7266195-7266489, 7266596-7266655,7267091-7267717,7268510-7268596, 7269292-7269612,7270051-7270224,7272806-7275022 Length = 1594 Score = 32.3 bits (70), Expect = 0.11 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345 +P YSD EIWRALE L+ V P L VA Sbjct: 1422 DPIGQYSDAEIWRALEGCQLKDVVASKPQKLDALVA 1457 >02_02_0490 - 10879761-10879861,10879946-10880185,10880274-10880337, 10880426-10880731,10881098-10881312,10881417-10881711, 10882193-10882357,10882477-10882527,10882657-10883109, 10883195-10883281,10883736-10884800,10884858-10885376 Length = 1186 Score = 32.3 bits (70), Expect = 0.11 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHL 297 +P E YSDE+IW AL HL Sbjct: 1040 DPLEEYSDEQIWEALNSCHL 1059 >06_03_0473 + 21190878-21191188,21191269-21192355,21192972-21193194, 21193286-21193356,21193385-21193441,21193442-21194056, 21194168-21194237,21194470-21194745,21194916-21195130, 21195224-21195529,21195750-21195813,21195902-21196141, 21196306-21196415 Length = 1214 Score = 31.9 bits (69), Expect = 0.15 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPA 324 +P +SDEEIW ALE L+ + PA Sbjct: 1065 DPLGLHSDEEIWEALEKCQLQTAIRSTPA 1093 >04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141, 7280242-7280547,7280643-7280857,7281395-7281689, 7281906-7281983,7282070-7282705,7283016-7283102, 7283945-7284265,7285503-7287599 Length = 1483 Score = 30.7 bits (66), Expect = 0.34 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345 +P YS++EIW+ALE L+ V P L VA Sbjct: 1333 DPIGRYSEDEIWQALERCQLKDIVATKPEKLDALVA 1368 >05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732, 5828821-5828907,5828981-5829583,5829680-5829844, 5829941-5830235,5830320-5830534,5830621-5830926, 5831200-5831263,5831384-5831623,5831756-5831853 Length = 1474 Score = 29.1 bits (62), Expect = 1.0 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345 +P ++DE+IW AL L+ + LP L V+ Sbjct: 1329 DPLGLHTDEDIWEALNKCQLKKTISALPGLLESPVS 1364 >08_02_1155 - 24756414-24756836 Length = 140 Score = 27.9 bits (59), Expect = 2.4 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 222 IRSGIEPVRGVQRRGDLARAGTRPP 296 +R + + V RRG+ AR G+RPP Sbjct: 33 LRHDVTEAQAVLRRGNAARRGSRPP 57 >10_08_0428 + 17842370-17842633,17842835-17842971,17843609-17844314 Length = 368 Score = 26.6 bits (56), Expect = 5.5 Identities = 9/27 (33%), Positives = 16/27 (59%) Frame = -3 Query: 339 LVPQPGRQPXHEGTEVGVFQRAPDLLV 259 L P P + HEGTE+ V+++ + + Sbjct: 171 LTPPPKKDTTHEGTEMAVYRKGKSVFL 197 >04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 Length = 696 Score = 26.6 bits (56), Expect = 5.5 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +1 Query: 244 FEAYSDEEI-WRALEHAHLRAFVXGLPAGLRHE 339 F+ ++E+ WR+ EH +RA + + A L HE Sbjct: 253 FKKLAEEKAAWRSREHEKVRAILEDMKADLDHE 285 >06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622, 8985783-8985899,8986258-8986399,8986587-8986627, 8987194-8987453,8987505-8987607,8987698-8987776, 8987856-8988115 Length = 597 Score = 26.2 bits (55), Expect = 7.2 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 326 PAGSPCTKARRWACSSARQISS 261 P SPCT ARR A ++ R+++S Sbjct: 102 PPASPCTTARRRARAAWRKVAS 123 >03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838, 2353031-2353708,2353800-2353964,2354139-2354433, 2354581-2354795,2354885-2355190,2355269-2355332, 2355426-2355665,2355783-2355886 Length = 1505 Score = 26.2 bits (55), Expect = 7.2 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 238 NPFEAYSDEEIWRALEHAHL 297 +P E +D+EIW ALE L Sbjct: 1358 DPLEECTDQEIWEALEKCQL 1377 >12_02_0396 + 18577574-18578056,18578094-18578723 Length = 370 Score = 25.8 bits (54), Expect = 9.6 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = -3 Query: 102 SELYRLT*LPHPRVPQLPGSFSLEYVPS 19 +EL++ T HP VP+ PG+F++E + S Sbjct: 23 AELFQWT---HPDVPRSPGTFTIEKMVS 47 >10_01_0236 + 2486371-2486952 Length = 193 Score = 25.8 bits (54), Expect = 9.6 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +3 Query: 225 RSGIEPVRGVQRRGDLARAGTRPPP 299 RSG R QRR L RA PPP Sbjct: 115 RSGEGQARAPQRRRPLERAAPLPPP 139 >07_03_0797 + 21575948-21576042,21576140-21576902,21577134-21577327, 21577667-21577700,21578421-21578485,21579032-21579524 Length = 547 Score = 25.8 bits (54), Expect = 9.6 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -3 Query: 90 RLT*LPHPRVPQLPGS 43 RLT +P P+VPQ PG+ Sbjct: 505 RLTSVPSPKVPQSPGT 520 >04_04_0419 + 25086456-25086768,25087302-25087369,25087458-25087681, 25087929-25088012,25088593-25088806,25089252-25089428, 25089526-25089645,25089865-25089991,25090104-25090130, 25090526-25091007 Length = 611 Score = 25.8 bits (54), Expect = 9.6 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = -1 Query: 341 TSCRSPAGSPCTKARRW 291 T+CR PAG C KA W Sbjct: 556 TACRLPAGLFCYKANGW 572 >01_05_0215 + 19374279-19374327,19374629-19374633,19376902-19376956, 19377159-19377334,19378020-19378241,19378334-19378572, 19379201-19379726,19379801-19380074,19380524-19381187, 19381604-19381832,19381924-19382190,19382308-19382496, 19382664-19383308 Length = 1179 Score = 25.8 bits (54), Expect = 9.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +1 Query: 256 SDEEIWRALEHAHLRAFVXGLPAG 327 S+EEI A E A+ F+ GLP G Sbjct: 1041 SEEEIIAAAEAANAHQFISGLPDG 1064 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,044,688 Number of Sequences: 37544 Number of extensions: 152237 Number of successful extensions: 428 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 401 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 428 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 518263348 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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