Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0739
(350 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-08
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0) 46 7e-06
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 40 8e-04
SB_45871| Best HMM Match : ABC_tran (HMM E-Value=2.5e-08) 40 8e-04
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.007
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 36 0.009
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 36 0.012
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.016
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.037
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.086
SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.086
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.20
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.20
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.20
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17) 30 0.46
SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0) 30 0.61
SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.80
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 29 0.80
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 29 1.1
SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38) 28 1.9
SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42) 28 2.4
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 27 5.7
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 27 5.7
SB_30509| Best HMM Match : TSP_1 (HMM E-Value=0.00019) 26 7.5
SB_17496| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.9
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 54.4 bits (125), Expect = 2e-08
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF+AYSDE++W LE +HL+AF GLP GL H +A
Sbjct: 1428 DPFDAYSDEDLWEVLEVSHLKAFASGLPEGLLHPIA 1463
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 54.4 bits (125), Expect = 2e-08
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF+AYSDE++W LE +HL+AF GLP GL H +A
Sbjct: 997 DPFDAYSDEDLWEVLEVSHLKAFASGLPEGLLHPIA 1032
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 48.8 bits (111), Expect = 1e-06
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PFE ++D+E+W A+EHA L+A V GLP L +EV
Sbjct: 1266 DPFEKFTDDELWEAIEHASLKALVAGLPGKLYYEV 1300
>SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 672
Score = 46.4 bits (105), Expect = 7e-06
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PFE+ DEE+WR LE HL++FV L GL H++
Sbjct: 517 DPFESTCDEELWRVLEAVHLKSFVSSLQDGLMHQI 551
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 39.5 bits (88), Expect = 8e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF +SD+ +W LE HLR V LP G+ E+A
Sbjct: 898 DPFAQFSDDALWNGLEEVHLRETVDKLPDGIETELA 933
>SB_45871| Best HMM Match : ABC_tran (HMM E-Value=2.5e-08)
Length = 435
Score = 39.5 bits (88), Expect = 8e-04
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF +SD+ +W LE HLR V LP G+ E+A
Sbjct: 14 DPFAQFSDDALWNGLEEVHLRETVDKLPDGIETELA 49
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330
+PF+ Y+DEEIW ALE A L+ + +P L
Sbjct: 1105 DPFDKYADEEIWDALEGASLKRTILQMPGQL 1135
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 35.9 bits (79), Expect = 0.009
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF +D+E+W AL+ HL+ +V LP L ++A
Sbjct: 161 DPFSKRTDKEVWEALDKVHLKPWVETLPKQLYQDLA 196
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 35.5 bits (78), Expect = 0.012
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF+ Y+D+EIW AL A + V GL L++ +
Sbjct: 214 DPFDIYTDDEIWSALHDAKVGPLVSGLVGKLKYHI 248
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 35.1 bits (77), Expect = 0.016
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF +SD+EIW AL + ++ V LP L + +
Sbjct: 1120 DPFRCFSDQEIWTALNNVQMKKCVESLPGKLEYRL 1154
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 33.9 bits (74), Expect = 0.037
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF+ ++D+EIW ALE L V LP L +++
Sbjct: 1163 DPFDKFTDQEIWAALESVQLLNTVRALPDQLMYQL 1197
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 32.7 bits (71), Expect = 0.086
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF +SD EIW AL ++ L FV L L +V
Sbjct: 1142 DPFGMFSDAEIWNALHNSQLGTFVGNLNGKLDFQV 1176
>SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 32.7 bits (71), Expect = 0.086
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P Y D+EIW L+ L +FV LP L ++V
Sbjct: 483 DPDHRYEDQEIWTVLKEVQLVSFVQRLPDALYYQV 517
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF ++D+EIW A+E L V LP L +++
Sbjct: 928 DPFGKFTDQEIWSAIESVQLLNTVRALPDQLMYQL 962
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 31.5 bits (68), Expect = 0.20
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P + Y+D+E+W AL A L + V L L + +
Sbjct: 1561 DPLDMYTDDEVWIALHDAQLGSLVTSLDGKLEYHI 1595
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 31.5 bits (68), Expect = 0.20
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF+ + D+EIW ALE+ ++ + L L + +
Sbjct: 1170 DPFDQFKDQEIWTALENVKMKHCIENLTGKLEYHL 1204
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.7 bits (66), Expect = 0.35
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 259 DEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
D+E+WR LE LR V LP GL V+
Sbjct: 880 DDELWRVLEIVQLRERVESLPDGLGFRVS 908
>SB_38073| Best HMM Match : ABC_tran (HMM E-Value=1.2e-17)
Length = 398
Score = 30.3 bits (65), Expect = 0.46
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P Y DEE+W AL+ L V P GL +V
Sbjct: 228 DPVSQYKDEELWTALKEVQLGDAVLEFPDGLDTKV 262
>SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 301
Score = 29.9 bits (64), Expect = 0.61
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P A++D+E+W AL + L V LP L + +
Sbjct: 156 DPVNAFNDQELWTALRNVQLAGCVSCLPGKLDYRL 190
>SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 29.5 bits (63), Expect = 0.80
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF Y D +W LE ++ V LP L E++
Sbjct: 327 DPFSRYDDAALWNVLEQVEMKDKVKELPGELYFELS 362
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 29.5 bits (63), Expect = 0.80
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P + ++++E+W ALE+ + V LP L + +
Sbjct: 1090 DPMQQFTNQEVWTALENVQMMKCVKRLPGKLEYRL 1124
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF + D +W+ L+ L+ V LP L E+A
Sbjct: 130 DPFSEHPDAGLWKVLDEVQLKQPVEDLPGKLDEELA 165
>SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38)
Length = 283
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P + Y+D+EIW AL +L + L H +
Sbjct: 149 DPLDMYTDDEIWSALSDVNLSPVMDKWAYDLEHRI 183
>SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42)
Length = 347
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+P + Y+D+EIW AL +L + L H +
Sbjct: 206 DPLDMYTDDEIWSALSDVNLSPVMDKWGYDLEHRI 240
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 26.6 bits (56), Expect = 5.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHA 291
+PF +SD+ +W ALE A
Sbjct: 851 DPFTQFSDDALWNALEEA 868
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 26 TYSSENDPGSCGTRGCGN 79
TY S D G CG+ GCGN
Sbjct: 707 TYGSSYDTG-CGSTGCGN 723
>SB_30509| Best HMM Match : TSP_1 (HMM E-Value=0.00019)
Length = 448
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 262 RRCTPRTGSIPERINC*WVDTRI*PATNHLLIKLI 158
+ CTP+ G IP I DT+ P ++ + I+LI
Sbjct: 85 QECTPKNGGIPYLITTCSGDTKGSPTSSTVYIQLI 119
>SB_17496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 232 ESNPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
E+ E Y E+ W AL H ++ + G A HEVA
Sbjct: 294 ENRNCEDYITEKYWEALNHENIPIVLGG--ANYDHEVA 329
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,522,703
Number of Sequences: 59808
Number of extensions: 172714
Number of successful extensions: 394
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 535585339
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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