BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0739
(350 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069827-1|AAL39972.1| 1548|Drosophila melanogaster SD07655p pro... 52 2e-07
AE014134-2257|AAS64699.1| 1548|Drosophila melanogaster CG6214-PM... 52 2e-07
AE014134-2256|AAS64698.1| 1548|Drosophila melanogaster CG6214-PQ... 52 2e-07
AE014134-2255|AAS64697.1| 1548|Drosophila melanogaster CG6214-PL... 52 2e-07
AE014134-2254|AAS64696.1| 1549|Drosophila melanogaster CG6214-PI... 52 2e-07
AE014134-2253|AAG22430.2| 1548|Drosophila melanogaster CG6214-PB... 52 2e-07
AE014134-2252|AAS64695.1| 1548|Drosophila melanogaster CG6214-PK... 52 2e-07
AE014134-2251|AAS64694.1| 1548|Drosophila melanogaster CG6214-PN... 52 2e-07
AE014134-2250|AAS64693.1| 1548|Drosophila melanogaster CG6214-PJ... 52 2e-07
AE014134-2249|AAS64692.1| 1548|Drosophila melanogaster CG6214-PH... 52 2e-07
AE014134-2248|AAS64691.1| 1548|Drosophila melanogaster CG6214-PP... 52 2e-07
AE014134-2247|AAS64690.1| 1548|Drosophila melanogaster CG6214-PG... 52 2e-07
AE014134-2246|AAS64689.1| 1549|Drosophila melanogaster CG6214-PO... 52 2e-07
AE014134-2245|AAF53223.4| 1549|Drosophila melanogaster CG6214-PA... 52 2e-07
AE014134-2244|AAS64688.1| 1548|Drosophila melanogaster CG6214-PC... 52 2e-07
AE014134-2243|AAS64687.1| 1548|Drosophila melanogaster CG6214-PF... 52 2e-07
AE014134-2242|AAS64686.1| 1548|Drosophila melanogaster CG6214-PE... 52 2e-07
AE014134-2241|AAS64685.1| 1548|Drosophila melanogaster CG6214-PD... 52 2e-07
BT010062-1|AAQ22531.1| 1145|Drosophila melanogaster LD15381p pro... 44 7e-05
AE014134-3324|AAF53950.2| 1145|Drosophila melanogaster CG9270-PA... 44 7e-05
AE014134-3323|AAS64733.1| 1225|Drosophila melanogaster CG9270-PB... 44 7e-05
AY069842-1|AAL39987.1| 985|Drosophila melanogaster SD08921p pro... 42 2e-04
AE014134-1469|AAF52648.2| 1355|Drosophila melanogaster CG7627-PA... 42 2e-04
AY118336-1|AAM48365.1| 1307|Drosophila melanogaster LD28489p pro... 42 3e-04
AY051858-1|AAK93282.1| 1074|Drosophila melanogaster LD35689p pro... 42 3e-04
AE014134-3012|AAN11020.1| 1307|Drosophila melanogaster CG31793-P... 42 3e-04
AE014297-2719|AAF55707.2| 1362|Drosophila melanogaster CG4562-PA... 39 0.002
AE013599-852|AAF58947.2| 1290|Drosophila melanogaster CG8799-PA ... 38 0.003
AE014297-1321|AAF54656.1| 1307|Drosophila melanogaster CG14709-P... 38 0.004
AE014297-3567|AAF56312.2| 1402|Drosophila melanogaster CG5789-PA... 36 0.019
AE014297-4347|AAF56870.1| 1302|Drosophila melanogaster CG11898-P... 35 0.025
AE014134-3011|AAF53736.3| 1318|Drosophila melanogaster CG31792-P... 34 0.044
AY051660-1|AAK93084.1| 1374|Drosophila melanogaster LD17001p pro... 33 0.13
AE014297-4346|AAN14163.1| 1374|Drosophila melanogaster CG11897-P... 33 0.13
AE014297-4345|AAF56869.2| 1374|Drosophila melanogaster CG11897-P... 33 0.13
AE013599-3171|AAF46706.1| 1283|Drosophila melanogaster CG10505-P... 31 0.31
AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA... 27 6.7
>AY069827-1|AAL39972.1| 1548|Drosophila melanogaster SD07655p protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2257|AAS64699.1| 1548|Drosophila melanogaster CG6214-PM,
isoform M protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2256|AAS64698.1| 1548|Drosophila melanogaster CG6214-PQ,
isoform Q protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2255|AAS64697.1| 1548|Drosophila melanogaster CG6214-PL,
isoform L protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2254|AAS64696.1| 1549|Drosophila melanogaster CG6214-PI,
isoform I protein.
Length = 1549
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1406 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1441
>AE014134-2253|AAG22430.2| 1548|Drosophila melanogaster CG6214-PB,
isoform B protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2252|AAS64695.1| 1548|Drosophila melanogaster CG6214-PK,
isoform K protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2251|AAS64694.1| 1548|Drosophila melanogaster CG6214-PN,
isoform N protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2250|AAS64693.1| 1548|Drosophila melanogaster CG6214-PJ,
isoform J protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2249|AAS64692.1| 1548|Drosophila melanogaster CG6214-PH,
isoform H protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2248|AAS64691.1| 1548|Drosophila melanogaster CG6214-PP,
isoform P protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2247|AAS64690.1| 1548|Drosophila melanogaster CG6214-PG,
isoform G protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2246|AAS64689.1| 1549|Drosophila melanogaster CG6214-PO,
isoform O protein.
Length = 1549
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1406 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1441
>AE014134-2245|AAF53223.4| 1549|Drosophila melanogaster CG6214-PA,
isoform A protein.
Length = 1549
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1406 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1441
>AE014134-2244|AAS64688.1| 1548|Drosophila melanogaster CG6214-PC,
isoform C protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2243|AAS64687.1| 1548|Drosophila melanogaster CG6214-PF,
isoform F protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2242|AAS64686.1| 1548|Drosophila melanogaster CG6214-PE,
isoform E protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>AE014134-2241|AAS64685.1| 1548|Drosophila melanogaster CG6214-PD,
isoform D protein.
Length = 1548
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE +D+EIW+ALE +HL++FV L AGL HE+A
Sbjct: 1405 DPFEIKTDDEIWKALELSHLKSFVKSLAAGLNHEIA 1440
>BT010062-1|AAQ22531.1| 1145|Drosophila melanogaster LD15381p protein.
Length = 1145
Score = 43.6 bits (98), Expect = 7e-05
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE Y+DE++W ALE HL+ V LP GL VA
Sbjct: 981 DPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVA 1016
>AE014134-3324|AAF53950.2| 1145|Drosophila melanogaster CG9270-PA,
isoform A protein.
Length = 1145
Score = 43.6 bits (98), Expect = 7e-05
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE Y+DE++W ALE HL+ V LP GL VA
Sbjct: 981 DPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVA 1016
>AE014134-3323|AAS64733.1| 1225|Drosophila melanogaster CG9270-PB,
isoform B protein.
Length = 1225
Score = 43.6 bits (98), Expect = 7e-05
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE Y+DE++W ALE HL+ V LP GL VA
Sbjct: 1061 DPFEQYADEKLWEALEEVHLKDEVSELPNGLESVVA 1096
>AY069842-1|AAL39987.1| 985|Drosophila melanogaster SD08921p
protein.
Length = 985
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF+ YSD+++WR+LE L+ V LP+GL+ ++
Sbjct: 818 DPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKI 852
>AE014134-1469|AAF52648.2| 1355|Drosophila melanogaster CG7627-PA
protein.
Length = 1355
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF+ YSD+++WR+LE L+ V LP+GL+ ++
Sbjct: 1188 DPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKI 1222
>AY118336-1|AAM48365.1| 1307|Drosophila melanogaster LD28489p protein.
Length = 1307
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLR 333
+PFE Y D+++W+ALE HL+ + LP+GL+
Sbjct: 1146 DPFEQYPDDKLWKALEDVHLKEEISELPSGLQ 1177
>AY051858-1|AAK93282.1| 1074|Drosophila melanogaster LD35689p protein.
Length = 1074
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLR 333
+PFE Y D+++W+ALE HL+ + LP+GL+
Sbjct: 913 DPFEQYPDDKLWKALEDVHLKEEISELPSGLQ 944
>AE014134-3012|AAN11020.1| 1307|Drosophila melanogaster CG31793-PA
protein.
Length = 1307
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLR 333
+PFE Y D+++W+ALE HL+ + LP+GL+
Sbjct: 1146 DPFEQYPDDKLWKALEDVHLKEEISELPSGLQ 1177
>AE014297-2719|AAF55707.2| 1362|Drosophila melanogaster CG4562-PA
protein.
Length = 1362
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF+ YSD ++W +LE L+ V LP+GL+ +++
Sbjct: 1173 DPFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKIS 1208
>AE013599-852|AAF58947.2| 1290|Drosophila melanogaster CG8799-PA
protein.
Length = 1290
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF+ YSDE++W LE L+ V LP GL +++
Sbjct: 1131 DPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKIS 1166
>AE014297-1321|AAF54656.1| 1307|Drosophila melanogaster CG14709-PA
protein.
Length = 1307
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PFE Y+D ++W ALE L+ + LP GL+ +++
Sbjct: 1141 DPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKIS 1176
>AE014297-3567|AAF56312.2| 1402|Drosophila melanogaster CG5789-PA
protein.
Length = 1402
Score = 35.5 bits (78), Expect = 0.019
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGL 318
+PFE Y+D E+W ALE LR + GL
Sbjct: 1232 DPFERYTDAELWSALEDVELRKAIPGL 1258
>AE014297-4347|AAF56870.1| 1302|Drosophila melanogaster CG11898-PA
protein.
Length = 1302
Score = 35.1 bits (77), Expect = 0.025
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330
+PFE +DEE+W ALE L+ FV L G+
Sbjct: 1121 DPFEEKTDEELWLALEAVKLKEFVSNLKDGI 1151
>AE014134-3011|AAF53736.3| 1318|Drosophila melanogaster CG31792-PA
protein.
Length = 1318
Score = 34.3 bits (75), Expect = 0.044
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
+PF+ YSD+ +W ALE L+ V + GL ++
Sbjct: 1120 DPFDEYSDDRLWCALEEVELKDVVASVATGLETKI 1154
>AY051660-1|AAK93084.1| 1374|Drosophila melanogaster LD17001p protein.
Length = 1374
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330
+P + SDEE+W+AL LR++V L GL
Sbjct: 1193 DPMDERSDEEMWKALGDVELRSYVSTLIGGL 1223
>AE014297-4346|AAN14163.1| 1374|Drosophila melanogaster CG11897-PB,
isoform B protein.
Length = 1374
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330
+P + SDEE+W+AL LR++V L GL
Sbjct: 1193 DPMDERSDEEMWKALGDVELRSYVSTLIGGL 1223
>AE014297-4345|AAF56869.2| 1374|Drosophila melanogaster CG11897-PA,
isoform A protein.
Length = 1374
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330
+P + SDEE+W+AL LR++V L GL
Sbjct: 1193 DPMDERSDEEMWKALGDVELRSYVSTLIGGL 1223
>AE013599-3171|AAF46706.1| 1283|Drosophila melanogaster CG10505-PA
protein.
Length = 1283
Score = 31.5 bits (68), Expect = 0.31
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGL 330
+PF+ SDE +W AL+ L+ V L GL
Sbjct: 1113 DPFDEKSDESLWSALDDVKLKKHVASLEGGL 1143
>AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA
protein.
Length = 1174
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 268 SPRRCTPRTGSIPER 224
SP RC PR GS P+R
Sbjct: 801 SPERCKPREGSSPDR 815
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,079,056
Number of Sequences: 53049
Number of extensions: 260360
Number of successful extensions: 562
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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