Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0739
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resis... 50 4e-07
U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resis... 50 4e-07
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 50 6e-07
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 46 8e-06
U41554-9|AAP82650.1| 328|Caenorhabditis elegans Multidrug resis... 46 8e-06
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 46 8e-06
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 46 8e-06
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 46 8e-06
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 46 8e-06
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 46 8e-06
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 32 0.10
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 32 0.10
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 32 0.10
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 32 0.10
Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical pr... 32 0.13
Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical p... 32 0.13
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr... 31 0.18
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 31 0.31
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis... 27 3.8
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 26 6.6
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 26 6.6
>U66261-1|AAB07022.1| 1525|Caenorhabditis elegans multidrug resistance
related protein2 protein.
Length = 1525
Score = 50.4 bits (115), Expect = 4e-07
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF AYSD ++W ALE+AHL+ FV L GL H+++
Sbjct: 1382 DPFSAYSDSQVWEALENAHLKPFVKSLQDGLEHKIS 1417
>U41554-4|AAA83299.2| 1525|Caenorhabditis elegans Multidrug resistance
protein familyprotein 2 protein.
Length = 1525
Score = 50.4 bits (115), Expect = 4e-07
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF AYSD ++W ALE+AHL+ FV L GL H+++
Sbjct: 1382 DPFSAYSDSQVWEALENAHLKPFVKSLQDGLEHKIS 1417
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 49.6 bits (113), Expect = 6e-07
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF YSD++IWRALE AHL+ F GLP GL ++++
Sbjct: 972 DPFFTYSDDQIWRALELAHLKHFAAGLPDGLLYKIS 1007
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resistance
related protein1 protein.
Length = 1540
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 1397 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 1432
>U41554-9|AAP82650.1| 328|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform d protein.
Length = 328
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 185 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 220
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform e protein.
Length = 1534
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 1391 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 1426
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform c protein.
Length = 1534
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 1391 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 1426
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform b protein.
Length = 1534
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 1391 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 1426
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform a protein.
Length = 1528
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 1385 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 1420
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 46.0 bits (104), Expect = 8e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+PF A+SD++IW AL +AHL +FV L GL H ++
Sbjct: 1391 DPFFAFSDDQIWEALRNAHLDSFVKSLQEGLHHHIS 1426
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+P YSD IW ALE HL+ V L L +V+
Sbjct: 1213 DPSLEYSDSMIWEALEKCHLKTLVQSLDKKLEADVS 1248
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+P YSD IW ALE HL+ V L L +V+
Sbjct: 1186 DPSLEYSDSMIWEALEKCHLKTLVQSLDKKLEADVS 1221
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+P YSD IW ALE HL+ V L L +V+
Sbjct: 1213 DPSLEYSDSMIWEALEKCHLKTLVQSLDKKLEADVS 1248
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+P YSD IW ALE HL+ V L L +V+
Sbjct: 1186 DPSLEYSDSMIWEALEKCHLKTLVQSLDKKLEADVS 1221
>Z81016-6|CAB02667.1| 1573|Caenorhabditis elegans Hypothetical protein
F21G4.2 protein.
Length = 1573
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAF 306
+PF YSD +IW+ LE A+L+ F
Sbjct: 1430 DPFNHYSDGDIWKTLEMANLKEF 1452
>Z48621-13|CAA88549.1| 1573|Caenorhabditis elegans Hypothetical
protein F21G4.2 protein.
Length = 1573
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAF 306
+PF YSD +IW+ LE A+L+ F
Sbjct: 1430 DPFNHYSDGDIWKTLEMANLKEF 1452
>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
E03G2.2 protein.
Length = 1503
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAFVXGLPAGLRHEVA 345
+P ++D+++W ALE+++L+A V LP L VA
Sbjct: 1359 DPKGQFTDQQLWLALENSNLKAHVELLPHKLESPVA 1394
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLRAF 306
+PF YSD++IW LE L+ F
Sbjct: 1000 DPFNQYSDDQIWNCLEICQLKQF 1022
>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resistance
protein familyprotein 6 protein.
Length = 1396
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 238 NPFEAYSDEEIWRALEHAHLR 300
+PF+ Y D IW ALE L+
Sbjct: 1230 DPFDEYDDATIWFALEQCELK 1250
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 256 SDEEIWRALEHAHLRAFVXGLPAGL 330
SDE+I RAL+ A+ F+ P GL
Sbjct: 487 SDEDIARALKEANAADFIKTFPEGL 511
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 256 SDEEIWRALEHAHLRAFVXGLPAGL 330
SDE+I RAL+ A+ F+ P GL
Sbjct: 487 SDEDIARALKEANAADFIKTFPEGL 511
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical protein
F22E10.1 protein.
Length = 1318
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 256 SDEEIWRALEHAHLRAFVXGLPAGLRHEV 342
S E++ +ALE A+ F+ LPAG+ EV
Sbjct: 1181 SVEKVHQALELANASRFLANLPAGIDTEV 1209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,778,336
Number of Sequences: 27780
Number of extensions: 135932
Number of successful extensions: 314
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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