Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0736
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92828-7|CAE48500.1|  700|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81561-2|CAB04551.2|  700|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF342986-1|AAL73338.1|  700|Caenorhabditis elegans KAL-1 protein.      30   1.5  
Z73975-2|CAA98275.1|  104|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z92828-7|CAE48500.1|  700|Caenorhabditis elegans Hypothetical
           protein K03D10.1 protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 515 CSPKILITDSGTGEILADXLISTDTEFEISSDT 613
           C  K+ +TD+ TG+ + D + STDT  + SS T
Sbjct: 527 CDYKVEVTDTLTGDFVVDGVFSTDTCDQTSSLT 559


>Z81561-2|CAB04551.2|  700|Caenorhabditis elegans Hypothetical
           protein K03D10.1 protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 515 CSPKILITDSGTGEILADXLISTDTEFEISSDT 613
           C  K+ +TD+ TG+ + D + STDT  + SS T
Sbjct: 527 CDYKVEVTDTLTGDFVVDGVFSTDTCDQTSSLT 559


>AF342986-1|AAL73338.1|  700|Caenorhabditis elegans KAL-1 protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 515 CSPKILITDSGTGEILADXLISTDTEFEISSDT 613
           C  K+ +TD+ TG+ + D + STDT  + SS T
Sbjct: 527 CDYKVEVTDTLTGDFVVDGVFSTDTCDQTSSLT 559


>Z73975-2|CAA98275.1|  104|Caenorhabditis elegans Hypothetical
           protein T06E8.2 protein.
          Length = 104

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = -3

Query: 622 FARSITRNL--KFSICANKXIGKDFSSSTVSDQNFR*ANILIKYHDDASVLTCRF 464
           + +SI +NL  KFS C    + ++ + +T+S++NFR  + L   H  + +LT  F
Sbjct: 41  YFKSIFQNLALKFSSCPFLCLLQEDNPTTISERNFREIS-LFSVHSPSILLTITF 94


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = -2

Query: 404 PLHXHCIHGRIHCAHSRDHTHHNYLRHYRXHILHQXHIP 288
           P H H   GR    H   H HH+  R +  H  H  H P
Sbjct: 399 PPHHHHHDGRSPSRHGHHHHHHHGCRPFPPHHGHH-HFP 436


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,163,726
Number of Sequences: 27780
Number of extensions: 180838
Number of successful extensions: 406
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 405
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)