Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0736
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.3  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   4.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   5.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   7.1  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 506 QDVCSPKILITDSGTGEILADXLISTD 586
           Q +CSPK+L  D  T ++L    I  D
Sbjct: 147 QPMCSPKLLTFDLTTSQLLKQVEIPHD 173


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 506 QDVCSPKILITDSGTGEILADXLISTD 586
           Q +CSPK+L  D  T ++L    I  D
Sbjct: 147 QPMCSPKLLTFDLTTSQLLKQVEIPHD 173


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 506 QDVCSPKILITDSGTGEILADXLISTD 586
           Q +CSPK+L  D  T ++L    I  D
Sbjct: 147 QPMCSPKLLTFDLTTSQLLKQVEIPHD 173


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 506 QDVCSPKILITDSGTGEILADXLISTD 586
           Q +CSPK+   D  T ++L    I  D
Sbjct: 152 QPMCSPKLFAFDLNTSQLLKQVEIPHD 178


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 506 QDVCSPKILITDSGTGEIL 562
           Q +CSPK+L  D  T ++L
Sbjct: 151 QLMCSPKLLAFDLNTSKLL 169


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 503 DQDVCSPKILITDSGTGEIL 562
           +Q +CSPK+L  D  T +++
Sbjct: 152 NQPMCSPKLLTFDLKTSKLV 171


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 506 QDVCSPKILITDSGTGEILADXLISTDTEFEISS 607
           Q +CSPK+ + D  T   L   ++  D     S+
Sbjct: 151 QPMCSPKLHVFDLNTSHQLKQVVMPHDIAVNAST 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,287
Number of Sequences: 438
Number of extensions: 2114
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)