Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0735
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 149 5e-37
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 90 3e-19
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 85 7e-18
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 83 4e-17
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 59 7e-10
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 43 5e-05
SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase Pef1|... 40 5e-04
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 36 0.004
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 33 0.030
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 33 0.052
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 32 0.091
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 31 0.21
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 30 0.37
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 29 0.48
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 29 0.64
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 27 2.0
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 27 2.0
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 3.4
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.4
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 27 3.4
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 3.4
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 26 4.5
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce... 26 6.0
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 25 7.9
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 25 7.9
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 25 7.9
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 149 bits (360), Expect = 5e-37
Identities = 70/153 (45%), Positives = 102/153 (66%)
Frame = +2
Query: 242 LTDNWDDHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNE 421
+ DNWDD EGYYK+ + + +++R+ ++ LG+G+F+ VV A D RN AIKIIRNNE
Sbjct: 136 MQDNWDDIEGYYKVVLMEELDSRYIVQSNLGKGMFSTVVSALDRN-RNQTFAIKIIRNNE 194
Query: 422 LMYKTGLKEISILKEVNEADPENKYHXVQFLGHFMHKGHLWLVLESLHIDLRCVLKKYGK 601
+MYK GLKE+SIL+ + AD E K H + + HFMHK HL +V E L ++LR +LKK+G+
Sbjct: 195 VMYKEGLKEVSILERLQAADREGKQHIIHYERHFMHKNHLCMVFEMLSLNLRDILKKFGR 254
Query: 602 NHGLNMKAIISYSRQXXXXXXXXXKVGIGHAXI 700
N GL++KA+ Y+ Q + + H+ I
Sbjct: 255 NVGLSIKAVRLYAYQMFMALDLLKQCNVIHSDI 287
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 89.8 bits (213), Expect = 3e-19
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 2/209 (0%)
Frame = +2
Query: 26 KKFNQSHDDNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFT-DMFSEKDDFKIKDL 202
K+ N+ DD +K +S++++ + T+V + ++ D + D+ L
Sbjct: 604 KRINKLLDD--AKVMQSLLDRACIITPVRNTEVQLINTAPLTEYEQDEINNYDNIYFTGL 661
Query: 203 LKVDKNDFTNNSTLTD-NWDDHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQ 379
VDK + +T ++ +DD G YK+ +GD + R+ + D LG+G F V+R D +
Sbjct: 662 RNVDKRRSADENTSSNFGFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDY-E 720
Query: 380 RNNYVAIKIIRNNELMYKTGLKEISILKEVNEADPENKYHXVQFLGHFMHKGHLWLVLES 559
VA+KIIRN + + L E IL+++ E DP ++Y VQ+ HF + HL + E
Sbjct: 721 TGKLVALKIIRNKKRFHMQALVETKILQKIREWDPLDEYCMVQYTDHFYFRDHLCVATEL 780
Query: 560 LHIDLRCVLKKYGKNHGLNMKAIISYSRQ 646
L +L ++K G GL + I S +RQ
Sbjct: 781 LGKNLYELIKSNGFK-GLPIVVIKSITRQ 808
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 85.4 bits (202), Expect = 7e-18
Identities = 48/131 (36%), Positives = 78/131 (59%)
Frame = +2
Query: 254 WDDHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYK 433
+DD G YK GD + R+ I DT+G+G F V++ D+ +R VAIK+I+N + +
Sbjct: 499 FDDDNGDYKAIQGDHLLYRYEIIDTVGKGSFGQVLKCIDH-KRGQVVAIKVIKNRQKFHG 557
Query: 434 TGLKEISILKEVNEADPENKYHXVQFLGHFMHKGHLWLVLESLHIDLRCVLKKYGKNHGL 613
L E+ ILK + EADP +K + +++L HF +GHL +V E L +L V+++ GL
Sbjct: 558 QTLVEVGILKRLCEADPADKNNVIRYLSHFDFRGHLCIVTELLGSNLFDVIRE-NNYKGL 616
Query: 614 NMKAIISYSRQ 646
+ + S++ Q
Sbjct: 617 PLIVVKSFALQ 627
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 83.0 bits (196), Expect = 4e-17
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +2
Query: 260 DHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYKTG 439
D+ Y +G ++ I DTLG G F V R QD + VAIK+I+N Y
Sbjct: 113 DYVLYVNDLLGTDEGRKYLILDTLGHGTFGQVARCQDL-KTQQIVAIKVIKNKPAFYNQC 171
Query: 440 LKEISILKEVNEA-DPENKYHXVQFLGHFMHKGHLWLVLESLHIDLRCVLKKYGKNHGLN 616
+ E+SIL+ +N DPE+K H ++ FMHK HL LV E L I+L ++K+ + GL+
Sbjct: 172 VMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINLYELIKQ-NQFRGLH 230
Query: 617 MKAIISYSRQ 646
+ + S++ Q
Sbjct: 231 LSLVRSFATQ 240
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 58.8 bits (136), Expect = 7e-10
Identities = 28/101 (27%), Positives = 52/101 (51%)
Frame = +2
Query: 254 WDDHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYK 433
+DD +G+YK+ NR+T+ LG G F V++ D + AIK+ R +
Sbjct: 343 FDDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQ-STGRHCAIKVTRAIPKYRE 401
Query: 434 TGLKEISILKEVNEADPENKYHXVQFLGHFMHKGHLWLVLE 556
L E+ +L+ + +DP N+ +Q +F ++ H+ +V +
Sbjct: 402 ASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTD 442
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 42.7 bits (96), Expect = 5e-05
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +2
Query: 323 DTLGQGVFANVVRAQDNGQRNNYVAIKIIR---NNELMYKTGLKEISILKEVNEADPENK 493
+ +G+G + V +A+ VA+K IR +E + T ++EIS+LKEVN D N+
Sbjct: 8 EKIGEGTYGVVYKARHK-LSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVN--DENNR 64
Query: 494 YHXVQFLGHFMHKGHLWLVLESLHIDLR 577
+ V+ L + L+LV E L +DL+
Sbjct: 65 SNCVRLLDILHAESKLYLVFEFLDMDLK 92
>SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase
Pef1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 288
Score = 39.5 bits (88), Expect = 5e-04
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 323 DTLGQGVFANVVRAQDNGQRNNYVAIKIIR--NNELMYKTGLKEISILKEVNEADPENKY 496
+ LG+G +A+V + Q N VA+K+IR +E T ++EIS++KE+ + +
Sbjct: 7 EKLGEGTYAHVYKGQ-NRVTGEIVALKVIRIDADEGTPSTAIREISLMKELRHPNIMSLS 65
Query: 497 HXVQFLGHFMHKGHLWLVLESLHIDLRCVLKKYGKNHGLNMKAIISYSRQ 646
+Q + L LV E + DL+ + YG L + ++++Q
Sbjct: 66 DVLQT------ENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQ 109
>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 504
Score = 36.3 bits (80), Expect = 0.004
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 GYYKIRVGDVVN-NRFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYKTG-- 439
G +IRV + ++ + + LG G F+ V +A R +VA+K+IR E+ K
Sbjct: 50 GDEEIRVANYPGLEKYQLIENLGDGAFSQVYKAYSI-DRKEHVAVKVIRKYEMNKKQRQG 108
Query: 440 -LKEISILKEVNEADPENKYHXVQ 508
KE++I++ V + N + V+
Sbjct: 109 VFKEVNIMRRVKHKNVVNLFDFVE 132
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 33.5 bits (73), Expect = 0.030
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 329 LGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYKTGLKEISILKEVNEADPENKYHXVQ 508
+GQG F +V RAQD + + VA+K++ + T + ++ +E+N N H +
Sbjct: 12 IGQGSFGSVFRAQD-VESSKIVALKVVD----LDATKDQIETLTQEINFLIDLNSVHITK 66
Query: 509 FLGHFMHKGHLWLVLE 556
+ F+ LW+ +E
Sbjct: 67 YYASFVDGFRLWITME 82
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 32.7 bits (71), Expect = 0.052
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 311 FTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMY-KTGLKEISILKEVNEADPE 487
+T D +G+G FA R +DN N A K+I L KT LK + E+
Sbjct: 41 YTRYDCIGEGGFARCFRVKDN--YGNIYAAKVIAKRSLQNDKTKLK---LFGEIKVHQSM 95
Query: 488 NKYHXVQFLGHFMHKGHLWLVLESL-HIDLRCVLKK 592
+ + V F+ F +++L+LE H L +L+K
Sbjct: 96 SHPNIVGFIDCFEDSTNIYLILELCEHKSLMELLRK 131
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 31.9 bits (69), Expect = 0.091
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +2
Query: 308 RFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRN-------NELMYKTGLKEISILKE 466
++T+ +G G F+NV +A N + VAIK+++ + + G++ +ILKE
Sbjct: 123 QYTLLQKMGDGAFSNVYKAIHN-RTGEKVAIKVVQRAQPNTDPRDPRKRQGVESHNILKE 181
Query: 467 VNEADPENKYHXVQFLGHFMHKGHLWLVLE 556
V + +Q L + +LVLE
Sbjct: 182 VQIMRRVKHPNIIQLLEFIQTPEYYYLVLE 211
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = +2
Query: 140 GETDDFTDMFSEKDDFKIKDLLKVDKNDFTNNSTLTDNWDDHEGYY 277
GE F E DFK DLL VD D + + L+D D EG Y
Sbjct: 74 GEFKSFVLRMKELADFKDVDLLLVDTGDLHDGNGLSDA-SDPEGIY 118
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.9 bits (64), Expect = 0.37
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +2
Query: 53 NHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFSEKDDFKIKDLLKVDKNDFTN 232
N S +E + G +D + G TD + ++DD +D + D
Sbjct: 303 NFSLEDSESLEFDEGSDDYDYAKLTTELVGNTDSLAE---DEDDILEED----EDEDEEE 355
Query: 233 NSTLTDNWDDHEGYYKIRVGDVVNNRFTIKD 325
+ D DD E + +GD + N FTI D
Sbjct: 356 LLAIFDASDDSEIEAYLSIGDTLQNDFTIYD 386
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 29.5 bits (63), Expect = 0.48
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 140 GETDDFTDMFSEKDDFKIKDLLKVDKNDFTNNSTLTDNWDDHEGYY 277
GE F E DFK DLL VD D + + L+D D +G Y
Sbjct: 74 GEFKSFALRMKELADFKGVDLLMVDTGDLHDGNGLSDA-SDPQGIY 118
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 29.1 bits (62), Expect = 0.64
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +2
Query: 311 FTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNEL--MYKTGLKEISILKEVNEAD- 481
+ + + LG+G F V ++Q Y +I+ + E T ++EI ILK + +
Sbjct: 36 YHLMEKLGEGTFGEVYKSQRRKDGKVYALKRILMHTEKEGFPITAIREIKILKSIKHENI 95
Query: 482 -PENKYHXVQFLGHFMHKGHLWLVLESLHIDLRCVLK 589
P + V+ +G +++V + DL +L+
Sbjct: 96 IPLSDMTVVRADKKHRRRGSIYMVTPYMDHDLSGLLE 132
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 27.5 bits (58), Expect = 2.0
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +2
Query: 11 RKQLLKKFNQSHDDNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFSEKDDFK 190
R+QLLK+ KN ESI++ + N G ++ D+ S DD
Sbjct: 132 REQLLKELQLQKSTEKGKNFESILQPQKRKETRGFHSKNDDD-GRLEERDDLRSSVDD-D 189
Query: 191 IKDLLKVDKNDFTNNSTLTDNWDDH 265
D + + N+ DN++++
Sbjct: 190 YYDYPRYSERKSLNSKRHVDNYNEN 214
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 8 QRKQLLKKFNQSHDDNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFSEKDD 184
++K++ +K N + SK +KN N+ K V+ A ET++ D+ E+ D
Sbjct: 521 KQKEVKEKRNTRREKRKSKKEFLKAQKNEASNNLKQEIVSKAGAQETEN-DDLIDEESD 578
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 2 RIQRKQLLKKFNQSHD--DNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFS 172
R+QR+ + D DN+ K+ ++++E N ++ ++ + E+D T+ S
Sbjct: 223 RVQRRMSYIPYGGFDDFLDNYYKDDDTVLEDNQLKSNSRIETLEEEDGAESDSITNTVS 281
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.6 bits (56), Expect = 3.4
Identities = 18/90 (20%), Positives = 37/90 (41%)
Frame = +2
Query: 35 NQSHDDNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFSEKDDFKIKDLLKVD 214
N++ ++ + + E+ +DQ + + S + DD M+S+ DD I+ ++
Sbjct: 1851 NENDENYEDSEDDGVYEEMEFEDDQSGSADSVVSEDDADDV--MYSDNDDMNIEFMVDEQ 1908
Query: 215 KNDFTNNSTLTDNWDDHEGYYKIRVGDVVN 304
N+ + D H I D+ N
Sbjct: 1909 DASSQNDDSSFDEASSHGDVISIDEEDLDN 1938
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 11 RKQLLKKFNQSHDDNHSKNTESIIEKNNGGNDQKLTD 121
RKQLL NQ++ +N KN+ S++ + G D +T+
Sbjct: 317 RKQLLSCTNQTNQNNVVKNSASVLVRQIMG-DYNITE 352
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 26.6 bits (56), Expect = 3.4
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +2
Query: 308 RFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYKTGLKEIS-ILKEVN-EAD 481
RF LG G F+ V + +D ++ A+K ++ + +G KE + +L+EV+ +
Sbjct: 565 RFRNVTLLGSGEFSEVFQVEDPVEKTLKYAVKKLK----VKFSGPKERNRLLQEVSIQRA 620
Query: 482 PENKYHXVQFLGHFMHKGHLWLVLE 556
+ H V+ + + H G L++ +E
Sbjct: 621 LKGHDHIVELMDSWEHGGFLYMQVE 645
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 50 DNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFSEKDDFKIKDL---LKVDKN 220
++H+ N+ SI + N + +TD + + F +FS DD + L L ++
Sbjct: 575 NHHTSNSNSISSNSTSLNPKDVTDPSHIPSAIDLGFQFLFSPMDDILLNLLNKQLGIEVT 634
Query: 221 DFTNNSTLTDNWD 259
+ T + + D D
Sbjct: 635 EMTGSDLVYDETD 647
>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 25.8 bits (54), Expect = 6.0
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +2
Query: 443 KEISILKEVNEADPENKY 496
KEI +++E++E +PEN++
Sbjct: 269 KEIELIQELHEMEPENRW 286
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 125 NPTSAGETDDFTDMFSEKDDFKIKDLLKVDKNDFTNNSTLTDNWDDHEG 271
NP + F S K+ F + K+DK D ++NS L D H+G
Sbjct: 114 NPPFWNQNKAFERKVSSKESFNMLGYDKIDKLD-SSNSYLGDFGVHHDG 161
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 260 DHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQRNNYVAIKIIRNNELMYK 433
D YY+ GD+ F I+D G G + + G + Y+ +KI+ ++ +K
Sbjct: 894 DERPYYRTMEGDLAKTYFFIEDE-GDGTYKFKL---TYGAFSEYLDVKILADSTFFFK 947
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 25.4 bits (53), Expect = 7.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -1
Query: 496 IFIFWIRLIDFF*YRNL----F*ASFVHQLIVSNYFYCYIVVSLTIILSTHYIGKH 341
IF+ ++ L++ F R+ F +SF+ +IV +F+ I+++ YIG H
Sbjct: 189 IFLAYVVLVNAFGARSYGECEFVSSFLKVVIVIIFFFVAIIINCGAAPKGGYIGAH 244
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,669,102
Number of Sequences: 5004
Number of extensions: 53283
Number of successful extensions: 200
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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