Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0731
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      26   0.37 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.0  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 309 QTKCTPLAYDLRFDLCMTGKVPSYSC-GQAASH 214
           + + TP+ + L++  C+   +PS++C G+ AS+
Sbjct: 40  ECQVTPVIHVLQYPGCVPKPIPSFACIGRCASY 72


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 246 PSYSCGQAASHSCSGCARHH 187
           P +   + A++ C G  RHH
Sbjct: 54  PLHIPAKRAAYDCEGVIRHH 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,268
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)