Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0729
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2257|AAF49833.1| 1544|Drosophila melanogaster CG17687-P...    30   3.5  

>AE014296-2257|AAF49833.1| 1544|Drosophila melanogaster CG17687-PA
            protein.
          Length = 1544

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +2

Query: 278  LNLGQINSQKKRYEIFKKNIEKKSLSVSRFIVREIIY*KNKIMMFINLRINVGQRESRSH 457
            +N G++   +KRY +F+K+I+K +  ++R+    ++   +K  + +  R+   Q   R+ 
Sbjct: 1087 INFGRVQ-MRKRYNMFRKDIDKLNDYMTRY--SNLLDFYDKAFLDVKTRLEAQQTRDRAV 1143

Query: 458  RRSLR 472
             R  R
Sbjct: 1144 ERQFR 1148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,159,302
Number of Sequences: 53049
Number of extensions: 402398
Number of successful extensions: 975
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)