Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0728
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028572-1|AAH28572.1|  716|Homo sapiens FLYWCH-type zinc finger...    31   3.3  
AB046772-1|BAB13378.1|  726|Homo sapiens KIAA1552 protein protein.     31   3.3  
BC018712-1|AAH18712.1|  391|Homo sapiens FLYWCH1 protein protein.      31   5.8  
BC001973-1|AAH01973.1|  466|Homo sapiens FLYWCH1 protein protein.      31   5.8  
AK127235-1|BAC86896.1|  328|Homo sapiens protein ( Homo sapiens ...    31   5.8  

>BC028572-1|AAH28572.1|  716|Homo sapiens FLYWCH-type zinc finger 1
           protein.
          Length = 716

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG+LL L  + + +E     + YW+C       C+ +A
Sbjct: 116 FLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCRQHAELGCRGRA 159



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 421 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 464



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 509 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 552


>AB046772-1|BAB13378.1|  726|Homo sapiens KIAA1552 protein protein.
          Length = 726

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG+LL L  + + +E     + YW+C       C+ +A
Sbjct: 126 FLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCRQHAELGCRGRA 169



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 431 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 474



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 519 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 562


>BC018712-1|AAH18712.1|  391|Homo sapiens FLYWCH1 protein protein.
          Length = 391

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 96  FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 139



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 184 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 227


>BC001973-1|AAH01973.1|  466|Homo sapiens FLYWCH1 protein protein.
          Length = 466

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 183 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 226



 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 271 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 314


>AK127235-1|BAC86896.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45302 fis, clone BRHIP3003845. ).
          Length = 328

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +3

Query: 150 FIPTIKGGKLLCLYGYTFHREYGDEFRSYWRCSNRLAFSCKCKA 281
           F+ T  GG  L    + + RE     + YW C ++    C+ +A
Sbjct: 121 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRA 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,146,638
Number of Sequences: 237096
Number of extensions: 1757675
Number of successful extensions: 3486
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3486
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)