Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0727
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.4  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   4.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.0  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   8.0  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 726 RNSLNMVVFQLQXKSALCGIMLN 658
           RN +      L+ K+A+CGI+ N
Sbjct: 449 RNCIGKKFAMLELKAAICGILAN 471


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 726 RNSLNMVVFQLQXKSALCGIMLN 658
           RN +      L+ K+A+CGI+ N
Sbjct: 449 RNCIGKKFAMLELKAAICGILAN 471


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
 Frame = -2

Query: 311 MLCN----WKTPM--ELSNYLHSLIDNYNLTFYCKNNPVK 210
           MLC+    W  P+  +L+N   S+ID   ++F     PVK
Sbjct: 70  MLCSEPAIWPKPVHIKLTNRESSIIDKTKISFNFSQGPVK 109


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 35  LPIV**LGKLYHL*SVGRYELLNFKLIWCVLLCRVCYFFCFFFKQ 169
           +P +  LGK+       RY +  F  +W  LL  V   F    K+
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 35  LPIV**LGKLYHL*SVGRYELLNFKLIWCVLLCRVCYFFCFFFKQ 169
           +P +  LGK+       RY +  F  +W  LL  V   F    K+
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 35  LPIV**LGKLYHL*SVGRYELLNFKLIWCVLLCRVCYFFCFFFKQ 169
           +P +  LGK+       RY +  F  +W  LL  V   F    K+
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 35  LPIV**LGKLYHL*SVGRYELLNFKLIWCVLLCRVCYFFCFFFKQ 169
           +P +  LGK+       RY +  F  +W  LL  V   F    K+
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 305 CNWKTPMELSNYLHSLIDN 249
           CN K    +   LH LIDN
Sbjct: 73  CNEKVKANVRKVLHHLIDN 91


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 726 RNSLNMVVFQLQXKSALCGIM 664
           RN +      L+ K+ LCGI+
Sbjct: 433 RNCIGQKFAMLEIKTVLCGIL 453


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 726 RNSLNMVVFQLQXKSALCGIM 664
           RN +      L+ K+ LCGI+
Sbjct: 433 RNCIGQKFAMLEIKTVLCGIL 453


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,051
Number of Sequences: 336
Number of extensions: 2747
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)