Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0727
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101647-1|AAI01648.1|  666|Homo sapiens semaphorin 7A, GPI memb...    30   7.7  
BC101643-1|AAI01644.1|  666|Homo sapiens semaphorin 7A, GPI memb...    30   7.7  
AY885237-1|AAW62253.1|  666|Homo sapiens sema domain, immunoglob...    30   7.7  
AM180451-1|CAJ55404.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AM180450-1|CAJ55403.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AM180449-1|CAJ55402.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AM180448-1|CAJ55401.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AM180447-1|CAJ55400.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AM180446-1|CAJ55399.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AM180445-1|CAJ55398.1|  666|Homo sapiens semaphorin 7A protein.        30   7.7  
AF071542-1|AAC80456.1|  666|Homo sapiens semaphorin K1 protein.        30   7.7  
AF069493-1|AAC82642.1|  666|Homo sapiens GPI-anchored membrane p...    30   7.7  
AF030698-1|AAC34261.1|  666|Homo sapiens semaphorin L protein.         30   7.7  
AF030697-1|AAC34741.1|  594|Homo sapiens semaphorin L protein.         30   7.7  

>BC101647-1|AAI01648.1|  666|Homo sapiens semaphorin 7A, GPI
           membrane anchor (John Milton Hagen blood group) protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>BC101643-1|AAI01644.1|  666|Homo sapiens semaphorin 7A, GPI
           membrane anchor (John Milton Hagen blood group) protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AY885237-1|AAW62253.1|  666|Homo sapiens sema domain,
           immunoglobulin domain (Ig), and GPI membrane anchor,
           (semaphorin)  protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180451-1|CAJ55404.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180450-1|CAJ55403.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180449-1|CAJ55402.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180448-1|CAJ55401.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180447-1|CAJ55400.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180446-1|CAJ55399.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AM180445-1|CAJ55398.1|  666|Homo sapiens semaphorin 7A protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AF071542-1|AAC80456.1|  666|Homo sapiens semaphorin K1 protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AF069493-1|AAC82642.1|  666|Homo sapiens GPI-anchored membrane
           protein CDw108 precursor protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AF030698-1|AAC34261.1|  666|Homo sapiens semaphorin L protein.
          Length = 666

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 291 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 337


>AF030697-1|AAC34741.1|  594|Homo sapiens semaphorin L protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 651 CSNYSNSKHNRALSKVLLSRDTRNRYRLSDRKLTSVFSLSWH*SKFCLY 505
           CS+ + +K+   L  V L  D   ++R  D ++  VFS  W+ S  C+Y
Sbjct: 219 CSDAATNKNFNRLQDVFLLPDPSGQWR--DTRVYGVFSNPWNYSAVCVY 265


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,403,835
Number of Sequences: 237096
Number of extensions: 1283527
Number of successful extensions: 2071
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2071
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)