Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0726
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 405 e-113
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 402 e-112
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 402 e-112
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 133 1e-31
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 130 1e-30
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 130 1e-30
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 126 2e-29
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 125 3e-29
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 125 3e-29
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 122 2e-28
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 122 2e-28
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 117 9e-27
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 117 9e-27
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 117 9e-27
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 117 9e-27
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 117 9e-27
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 117 9e-27
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 117 9e-27
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 116 1e-26
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 114 7e-26
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 105 2e-23
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 105 3e-23
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 104 7e-23
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 104 7e-23
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 103 1e-22
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 101 7e-22
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 101 7e-22
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 100 9e-22
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 99 2e-21
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 99 2e-21
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 99 2e-21
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 93 2e-19
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 93 2e-19
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 89 3e-18
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 38 0.007
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 38 0.007
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 34 0.085
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 34 0.085
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 34 0.085
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 33 0.26
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 31 0.79
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 31 1.0
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 30 1.4
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 30 1.8
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 30 1.8
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 30 1.8
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 29 4.2
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 29 4.2
U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormo... 27 9.8
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 27 9.8
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 27 9.8
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 27 9.8
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 405 bits (997), Expect = e-113
Identities = 178/230 (77%), Positives = 212/230 (92%)
Frame = +1
Query: 1 NNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRD 180
NNLR+RL DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF+EAYRP+H+
Sbjct: 96 NNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKG 155
Query: 181 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 360
D F V+ MR VEFKVVET+P+P CIV+PDT+IH +G+PIKREEEEE++N +GYDD+GG
Sbjct: 156 DIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESMNDIGYDDLGGV 215
Query: 361 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 540
RKQLAQIKEMVELPLRHP LFKAIG+KPPRGIL++GPPGTGKTLIARAVANETG+FFFLI
Sbjct: 216 RKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLI 275
Query: 541 NGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
NGPE+MSK++GESESNLRKAFEE +KN PAI+FIDE+DAIAPKREKT+GE
Sbjct: 276 NGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGE 325
Score = 120 bits (290), Expect = 8e-28
Identities = 57/131 (43%), Positives = 83/131 (63%)
Frame = +1
Query: 304 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Query: 664 PKREKTHGEXG 696
R G G
Sbjct: 590 KARGGGAGGDG 600
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 402 bits (990), Expect = e-112
Identities = 186/233 (79%), Positives = 210/233 (90%)
Frame = +1
Query: 1 NNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRD 180
NNLR RL DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF +AYRP+H+
Sbjct: 96 NNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKG 154
Query: 181 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 360
D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG
Sbjct: 155 DIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGV 214
Query: 361 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 540
RKQLAQIKEMVELPLRHP LFKAIGVKPPRGIL++GPPGTGKTLIARAVANETGAFFFLI
Sbjct: 215 RKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Query: 541 NGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEXGK 699
NGPEIMSK++GESESNLRKAF E +KNSPAI+FIDE+DAIAPKREK HGE K
Sbjct: 275 NGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEK 327
Score = 123 bits (296), Expect = 1e-28
Identities = 57/131 (43%), Positives = 85/131 (64%)
Frame = +1
Query: 304 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Query: 664 PKREKTHGEXG 696
R + G+ G
Sbjct: 589 KARGGSVGDAG 599
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 402 bits (990), Expect = e-112
Identities = 186/233 (79%), Positives = 210/233 (90%)
Frame = +1
Query: 1 NNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRD 180
NNLR RL DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF +AYRP+H+
Sbjct: 96 NNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKG 154
Query: 181 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 360
D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G+PIKREEEEEALN VGYDD+GG
Sbjct: 155 DIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNEVGYDDLGGV 214
Query: 361 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 540
RKQLAQIKEMVELPLRHP LFKAIGVKPPRGIL++GPPGTGKTLIARAVANETGAFFFLI
Sbjct: 215 RKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLI 274
Query: 541 NGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEXGK 699
NGPEIMSK++GESESNLRKAF E +KNSPAI+FIDE+DAIAPKREK HGE K
Sbjct: 275 NGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVEK 327
Score = 123 bits (296), Expect = 1e-28
Identities = 57/131 (43%), Positives = 85/131 (64%)
Frame = +1
Query: 304 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Query: 664 PKREKTHGEXG 696
R + G+ G
Sbjct: 589 KARGGSVGDAG 599
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 133 bits (322), Expect = 1e-31
Identities = 59/133 (44%), Positives = 91/133 (68%)
Frame = +1
Query: 274 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 453
V+ D +P+ + E Y D+GG +Q+ +IKE VELPL HP ++ +G++PP+G
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 633
+++YG PGTGKTL+A+AVAN+T A F I G E++ K G+ +R+ F A++N+P+I
Sbjct: 225 VILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSI 284
Query: 634 IFIDELDAIAPKR 672
+FIDE+DA+ KR
Sbjct: 285 VFIDEIDAVGTKR 297
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 130 bits (313), Expect = 1e-30
Identities = 54/114 (47%), Positives = 81/114 (71%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
+DDIGGC Q+ ++KE VELPL HP ++ +G+ P+G+++YG PGTGKTL+A+AVAN T
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANST 241
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKT 681
A F G +++ K +GE +R+ F+ A + +P+I+FIDE+DA+ KR T
Sbjct: 242 SATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDT 295
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 130 bits (313), Expect = 1e-30
Identities = 60/113 (53%), Positives = 77/113 (68%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ Y DIGG Q +++E VELPL H L++ IG+ PPRG+LMYGPPG GKT++A+AVA
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
T A F + G E + K GE +R F A +NSP+IIFIDE+DAIA KR
Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKR 270
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 126 bits (304), Expect = 2e-29
Identities = 53/111 (47%), Positives = 82/111 (73%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+L++GPPGTGKTL+ARAVA+ T
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R
Sbjct: 218 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 268
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 126 bits (304), Expect = 2e-29
Identities = 57/111 (51%), Positives = 77/111 (69%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y DIGGC KQ+ ++ E V LP+ H F +G+ PP+G+LMYGPPGTGKT++ARAVA +T
Sbjct: 176 YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQT 235
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+ F + GP+++ G+ +R AF A + +PAIIFIDELDAI KR
Sbjct: 236 KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKR 286
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 125 bits (302), Expect = 3e-29
Identities = 54/113 (47%), Positives = 76/113 (67%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V Y D+GGC+ Q+ +++E+VE PL HP + +G++PP+G+L+YGPPGTGKTL ARAVAN
Sbjct: 174 VTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVAN 233
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
T A F + G E++ K GE +R+ FE A +IF DE+DA+ R
Sbjct: 234 RTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGAR 286
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 125 bits (302), Expect = 3e-29
Identities = 53/111 (47%), Positives = 81/111 (72%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 212
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R
Sbjct: 213 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 263
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 125 bits (302), Expect = 3e-29
Identities = 53/111 (47%), Positives = 81/111 (72%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R
Sbjct: 234 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 284
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 122 bits (295), Expect = 2e-28
Identities = 54/127 (42%), Positives = 83/127 (65%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 471
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G L++GP
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 184
Query: 472 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 651
PGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P I+F+DE+
Sbjct: 185 PGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEI 244
Query: 652 DAIAPKR 672
DAI +R
Sbjct: 245 DAIGGRR 251
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 122 bits (295), Expect = 2e-28
Identities = 54/127 (42%), Positives = 83/127 (65%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 471
+P+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G L++GP
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGP 192
Query: 472 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 651
PGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P I+F+DE+
Sbjct: 193 PGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEI 252
Query: 652 DAIAPKR 672
DAI +R
Sbjct: 253 DAIGGRR 259
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 443
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 444 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 503
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 443
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 444 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 503
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 117 bits (281), Expect = 9e-27
Identities = 55/120 (45%), Positives = 80/120 (66%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 508 ANE--TGA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
ANE GA FF+ G + +SK GESE LR F++A P+IIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 116 bits (280), Expect = 1e-26
Identities = 57/134 (42%), Positives = 84/134 (62%), Gaps = 1/134 (0%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGILMYG 468
+P + E + V +DDIG + Q++ + P++ F A+G+ P+GIL+ G
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCG 575
Query: 469 PPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 648
PPG GKTL+A+AVANETG FF + GPE+++ GESE +R F+ A + P +IF DE
Sbjct: 576 PPGCGKTLLAKAVANETGMNFFSVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDE 635
Query: 649 LDAIAPKREKTHGE 690
+DA+ PKR +HGE
Sbjct: 636 IDALVPKR--SHGE 647
Score = 106 bits (255), Expect = 1e-23
Identities = 47/119 (39%), Positives = 76/119 (63%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++ IGG +Q ++ + + L+ P F +GV PPRG +++GPPG GKT+ A+AVA
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAG 261
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
E + E++S ++GE+E +R+ F+ A +NSP I+ +D++DAIAP+RE E
Sbjct: 262 ELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 115 bits (276), Expect = 4e-26
Identities = 54/120 (45%), Positives = 76/120 (63%), Gaps = 2/120 (1%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++DIGG + +I++ V P +HP F+ G+ PP GIL+YGPPG KTLIARA+A+
Sbjct: 456 VSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALAS 515
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR--EKTHG 687
E F + GPE+ SK G+SE +R F A + +P I+F DE+DA+ R EK+ G
Sbjct: 516 EAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSSG 575
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 346 DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGA 525
+IGGC +++ V P+R + P +L++G PG+GKTL+ + VA
Sbjct: 247 NIGGCFTAKQVLEDYVISPVRQK--------ESPCSVLIWGLPGSGKTLLLKEVALVLSG 298
Query: 526 FFFLINGPEIMSKLAGESESNL 591
I E + +L G + N+
Sbjct: 299 STTYIGSCEELMELNGVTTGNI 320
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 114 bits (274), Expect = 7e-26
Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 1/134 (0%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK-PPRGILMYG 468
+P + E + V +DDIG + Q++ + P++ F A+G+ P+GIL+ G
Sbjct: 516 QPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCG 575
Query: 469 PPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDE 648
PPG GKTL+A+AVANETG F + GPE+++ GESE +R F+ A + P +IF DE
Sbjct: 576 PPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDE 635
Query: 649 LDAIAPKREKTHGE 690
+DA+ PKR +HGE
Sbjct: 636 IDALVPKR--SHGE 647
Score = 106 bits (255), Expect = 1e-23
Identities = 47/119 (39%), Positives = 76/119 (63%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++ IGG +Q ++ + + L+ P F +GV PPRG +++GPPG GKT+ A+AVA
Sbjct: 203 VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAG 261
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
E + E++S ++GE+E +R+ F+ A +NSP I+ +D++DAIAP+RE E
Sbjct: 262 ELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 109 bits (261), Expect = 2e-24
Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Frame = +1
Query: 316 EEALNAVGY--DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKT 489
+E L+ G DD+ GC A ++E V LP +P+LFK + +P +GIL++GPPG GKT
Sbjct: 167 DEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPGNGKT 225
Query: 490 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPK 669
L+A+AVA E+ FF I+ + SK G+SE +R F+ A P+IIFIDE+D+I +
Sbjct: 226 LLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCE 285
Query: 670 REKTHGEXGK 699
R + E +
Sbjct: 286 RSEKDAEVSR 295
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 105 bits (253), Expect = 2e-23
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = +1
Query: 262 APDTVIHCDGEPIKREEEE--EALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIG 435
A T+ H D I E E N +G+ D+ G ++E+V LP + P +F I
Sbjct: 287 AEPTLKHFDENIISLIESEIMSVNNEIGWADVAGLEGAKKALREIVVLPFKRPDVFTGIR 346
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAD 615
PP+G+L++GPPGTGKT+I R VA++ A FF I+ + SK GE E +R F A
Sbjct: 347 A-PPKGVLLFGPPGTGKTMIGRCVASQCKATFFNISASSLTSKWVGEGEKLVRALFSVAR 405
Query: 616 KNSPAIIFIDELDAIAPKREKTHGEXGK 699
P++IFIDE+D++ R ++ E +
Sbjct: 406 LKLPSVIFIDEIDSLLSSRSESEHESSR 433
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 105 bits (252), Expect = 3e-23
Identities = 46/110 (41%), Positives = 74/110 (67%)
Frame = +1
Query: 343 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 522
+D+GG +Q +++++ P ++P LF+++GV +GIL++GP G GKTL+A A + +
Sbjct: 2 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 61
Query: 523 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+ GPE++SK G SE N+R FE+A +P I+F DELD++APKR
Sbjct: 62 FSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKR 111
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 105 bits (252), Expect = 3e-23
Identities = 46/110 (41%), Positives = 74/110 (67%)
Frame = +1
Query: 343 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 522
+D+GG +Q +++++ P ++P LF+++GV +GIL++GP G GKTL+A A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 523 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+ GPE++SK G SE N+R FE+A +P I+F DELD++APKR
Sbjct: 788 FSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKR 837
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 105 bits (252), Expect = 3e-23
Identities = 46/110 (41%), Positives = 74/110 (67%)
Frame = +1
Query: 343 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 522
+D+GG +Q +++++ P ++P LF+++GV +GIL++GP G GKTL+A A + +
Sbjct: 728 EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSN 787
Query: 523 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+ GPE++SK G SE N+R FE+A +P I+F DELD++APKR
Sbjct: 788 FSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKR 837
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 104 bits (249), Expect = 7e-23
Identities = 50/121 (41%), Positives = 74/121 (61%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ + D+ GC + +I+E V+ L++P F +G K PRG L+ GPPG GKTL+A+A+A
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA 340
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E+ F +NG E + + G S +R F+EA +P II+IDE+DAI KR + G
Sbjct: 341 ESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAG 400
Query: 694 G 696
G
Sbjct: 401 G 401
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 104 bits (249), Expect = 7e-23
Identities = 50/121 (41%), Positives = 74/121 (61%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ + D+ GC + +I+E V+ L++P F +G K PRG L+ GPPG GKTL+A+A+A
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA 340
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E+ F +NG E + + G S +R F+EA +P II+IDE+DAI KR + G
Sbjct: 341 ESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEGAGAG 400
Query: 694 G 696
G
Sbjct: 401 G 401
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 103 bits (247), Expect = 1e-22
Identities = 49/121 (40%), Positives = 70/121 (57%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V + D+ GC + +I E V L++P +K +G K P+G ++ GPPGTGKTL+A+A A
Sbjct: 290 VKFADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAG 348
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E F ++G E + G + +R F A KNSP I+FIDE+DA+ KR G
Sbjct: 349 EANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMG 408
Query: 694 G 696
G
Sbjct: 409 G 409
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 101 bits (241), Expect = 7e-22
Identities = 49/112 (43%), Positives = 68/112 (60%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
+D+IGGC + +A++K+ + LPLR S + + PPRGIL+YGPPG GKTL+A+AVA
Sbjct: 79 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 138
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
G F + + K GES+ F A K P IIFIDE+D+ R+
Sbjct: 139 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQ 190
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 101 bits (241), Expect = 7e-22
Identities = 49/112 (43%), Positives = 68/112 (60%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
+D+IGGC + +A++K+ + LPLR S + + PPRGIL+YGPPG GKTL+A+AVA
Sbjct: 82 WDEIGGCEELVAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAA 141
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
G F + + K GES+ F A K P IIFIDE+D+ R+
Sbjct: 142 GCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDRQ 193
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 100 bits (240), Expect = 9e-22
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V + DI G +KE V LP++ P LF KP +GIL++GPPGTGK+ IA+AVA
Sbjct: 115 VKWTDIAGLEGAKEALKEAVILPIKFPQLFTG-NRKPWQGILLFGPPGTGKSYIAKAVAT 173
Query: 514 ETG-AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
E G + FF I+ ++MSK GESE ++ F A ++ P+IIFIDE+D++ R E
Sbjct: 174 EAGESTFFSISSSDLMSKWLGESEKLVKNLFALAREHKPSIIFIDEIDSLCSARSDNESE 233
Query: 691 XGK 699
+
Sbjct: 234 SAR 236
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 99 bits (238), Expect = 2e-21
Identities = 54/121 (44%), Positives = 79/121 (65%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++D+GG L + K+ V +R +LF + +K GI++YG PG GKTLIA+AVA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALKRS-GIILYGSPGCGKTLIAKAVAT 515
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E F + GPE+++K G+SE NLRK FE A + SP +IF DE+D++AP R + +G+
Sbjct: 516 EFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGR-NGDS 574
Query: 694 G 696
G
Sbjct: 575 G 575
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 99 bits (238), Expect = 2e-21
Identities = 54/121 (44%), Positives = 79/121 (65%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++D+GG L + K+ V +R +LF + +K GI++YG PG GKTLIA+AVA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALKRS-GIILYGSPGCGKTLIAKAVAT 515
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E F + GPE+++K G+SE NLRK FE A + SP +IF DE+D++AP R + +G+
Sbjct: 516 EFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGR-NGDS 574
Query: 694 G 696
G
Sbjct: 575 G 575
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 99 bits (238), Expect = 2e-21
Identities = 54/121 (44%), Positives = 79/121 (65%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++D+GG L + K+ V +R +LF + +K GI++YG PG GKTLIA+AVA
Sbjct: 462 VRWEDVGG----LEETKQTVLESIR-TNLFGSRALKRS-GIILYGSPGCGKTLIAKAVAT 515
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E F + GPE+++K G+SE NLRK FE A + SP +IF DE+D++AP R + +G+
Sbjct: 516 EFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGR-NGDS 574
Query: 694 G 696
G
Sbjct: 575 G 575
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/115 (41%), Positives = 71/115 (61%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
N + DDI G + E V LPL P F+ + P + +++ GPPGTGKTLIARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 508 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A+E+ + FF ++ ++ SK G+SE +R FE A +P+IIFIDE+D + +R
Sbjct: 247 ASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR 301
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/115 (41%), Positives = 71/115 (61%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
N + DDI G + E V LPL P F+ + P + +++ GPPGTGKTLIARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 508 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A+E+ + FF ++ ++ SK G+SE +R FE A +P+IIFIDE+D + +R
Sbjct: 247 ASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR 301
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/115 (41%), Positives = 71/115 (61%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
N + DDI G + E V LPL P F+ + P + +++ GPPGTGKTLIARA+
Sbjct: 188 NTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAI 246
Query: 508 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A+E+ + FF ++ ++ SK G+SE +R FE A +P+IIFIDE+D + +R
Sbjct: 247 ASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR 301
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/99 (41%), Positives = 63/99 (63%)
Frame = +1
Query: 376 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEI 555
+++E+V+ L+ P + +G + P+G+L+ GPPGTGKTL+ARA+A E FF G E
Sbjct: 212 EVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEF 270
Query: 556 MSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
L G+ +R F++A +P IIFIDE+D++ KR
Sbjct: 271 DEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKR 309
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 80.2 bits (189), Expect = 1e-15
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Frame = +1
Query: 412 PSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESN 588
P + +G+K RGIL++GPPGTGKTL+AR + A ++NGP+I+ K GESESN
Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESN 378
Query: 589 LRKAFEEADK-------NSPA-IIFIDELDAIAPKREKTHG 687
+RK F +A++ NS II DE+DAI +R G
Sbjct: 379 VRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAG 419
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES----NLRKAFEEAD 615
R +++ G TGKT +A +A + F + PE G SES L+KAFE+A
Sbjct: 614 RTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPE---DTVGFSESAKCMALKKAFEDAK 670
Query: 616 KNSPAIIFIDELDAI 660
++ +++ ID L+ +
Sbjct: 671 RSKLSVLLIDNLERL 685
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 80.2 bits (189), Expect = 1e-15
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Frame = +1
Query: 412 PSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESN 588
P + +G+K RGIL++GPPGTGKTL+AR + A ++NGP+I+ K GESESN
Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESN 378
Query: 589 LRKAFEEADK-------NSPA-IIFIDELDAIAPKREKTHG 687
+RK F +A++ NS II DE+DAI +R G
Sbjct: 379 VRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAG 419
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES----NLRKAFEEAD 615
R +++ G TGKT +A +A + F + PE G SES L+KAFE+A
Sbjct: 614 RTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPE---DTVGFSESAKCMALKKAFEDAK 670
Query: 616 KNSPAIIFIDELDAI 660
++ +++ ID L+ +
Sbjct: 671 RSKLSVLLIDNLERL 685
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 80.2 bits (189), Expect = 1e-15
Identities = 45/101 (44%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Frame = +1
Query: 412 PSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFF-FLINGPEIMSKLAGESESN 588
P + +G+K RGIL++GPPGTGKTL+AR + A ++NGP+I+ K GESESN
Sbjct: 253 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESN 312
Query: 589 LRKAFEEADK-------NSPA-IIFIDELDAIAPKREKTHG 687
+RK F +A++ NS II DE+DAI +R G
Sbjct: 313 VRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAG 353
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES----NLRKAFEEAD 615
R +++ G TGKT +A +A + F + PE G SES L+KAFE+A
Sbjct: 548 RTVVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPE---DTVGFSESAKCMALKKAFEDAK 604
Query: 616 KNSPAIIFIDELDAI 660
++ +++ ID L+ +
Sbjct: 605 RSKLSVLLIDNLERL 619
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 627
R ++ YGPPGTGKTL A+++A +G + ++ G +I + L + S + K F+ A K+
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDI-APLGRDGVSAIHKVFDWASKSRK 401
Query: 628 A-IIFIDELDAIAPKREK 678
I+FIDE DA KR K
Sbjct: 402 GLIVFIDEADAFLQKRSK 419
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +1
Query: 433 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 612
GV RG L YGPPGTGK+ A+A+ G L++ E + L A
Sbjct: 193 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE-----RTLDDDRLNHLLNTA 247
Query: 613 DKNSPAIIFIDELDAIAPKRE 675
NS ++ ++++DA RE
Sbjct: 248 PPNS--VVILEDIDAAFVSRE 266
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +1
Query: 433 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 612
GV RG L YGPPGTGK+ A+A+ G L++ E + L A
Sbjct: 239 GVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSE-----RTLDDDRLNHLLNTA 293
Query: 613 DKNSPAIIFIDELDAIAPKRE 675
NS ++ ++++DA RE
Sbjct: 294 PPNS--VVILEDIDAAFVSRE 312
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 37.5 bits (83), Expect = 0.009
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Frame = +1
Query: 370 LAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE---------TG 522
++ + + L +H + K I V R IL+ GPPGTGKT + + +A +
Sbjct: 150 MSYVAALARLSEKHVNT-KIINVN--RLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSK 206
Query: 523 AFFFLINGPEIMSKLAGESESNLRKAFEEAD---KNSPAIIF--IDELDAIAPKREKT 681
+ IN + SK ES ++K F++ D ++ ++F IDE++++ RE +
Sbjct: 207 SVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRESS 264
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 35.1 bits (77), Expect = 0.049
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 226 VVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPL 405
+ E P+P I H G I E +E A G+ R + + +M+ L
Sbjct: 20 IEEVKPTPKQIKRIAAHSHVKGLGIDTETQEAHYEAAGFVGQAPARTAASIVVDMIRL-- 77
Query: 406 RHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETG 522
K + R +L+ GPP TGKT IA A++ E G
Sbjct: 78 ------KCMA---GRAVLIAGPPATGKTAIALAMSQELG 107
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 34.3 bits (75), Expect = 0.085
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 615
+L+ GP G GKT + + +A L + + + GE ES ++K + A +
Sbjct: 144 VLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNVE 203
Query: 616 KNSPAIIFIDELDAIAPKRE 675
K I+F+DE+D IA E
Sbjct: 204 KAQQGIVFLDEVDKIAAAHE 223
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 34.3 bits (75), Expect = 0.085
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEA----D 615
+L+ GP G GKT + + +A L + + + GE ES ++K + A +
Sbjct: 260 VLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNVE 319
Query: 616 KNSPAIIFIDELDAIAPKRE 675
K I+F+DE+D IA E
Sbjct: 320 KAQQGIVFLDEVDKIAAAHE 339
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.085
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 612
R +L+ G PG GKT IA A++ E G F I EI S ++E+ L +AF A
Sbjct: 67 RALLVTGEPGAGKTAIAIAISKELGEDTPFVSIVASEIYSNEINKTEA-LTQAFRRA 122
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +1
Query: 370 LAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGA--FFFLIN 543
+ +KE + + L K+IG K + +GPPG GKT IA+++A F F +
Sbjct: 483 MKDVKERIMEFIAVNLLRKSIGGKI---LCFHGPPGVGKTSIAKSIATALNREYFRFSVG 539
Query: 544 GPEIMSKLAGESES-------NLRKAFEEADKNSPAIIFIDELDAI 660
G ++++ G + + + ++ +P ++ IDE+D I
Sbjct: 540 GMTDVAEIKGHRRTYVGAMPGKMIQCMKKVKTENP-LVLIDEVDKI 584
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS--- 624
+L+ GP G GK+ +AR VA + G +N + + ++L K E A K S
Sbjct: 333 LLLSGPAGLGKSTLARIVARQAGYSTIDVNASD------ARTVADLNKVLEGAVKTSRTL 386
Query: 625 -----PAIIFIDELD 654
PA + +DE+D
Sbjct: 387 DADQRPACLILDEID 401
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 466 GPPGTGKTLIARAVANETGAFF 531
GPPG GKT IA+A+A G F
Sbjct: 336 GPPGIGKTSIAKAIAESMGRKF 357
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANE 516
+L YGPPGTGKT A A +
Sbjct: 65 LLFYGPPGTGKTTTVLAAARQ 85
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK 618
IL+ G PGTGK+ + + VA + G F ++ + L G+ + + DK
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLGFVFIEVSKEVRENNLQGDFDEQYNCHVLDEDK 66
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 612
+++ GP G GKT + RA+A + I GPE G S S +++ +EA
Sbjct: 819 LVLIGPSGVGKTALFRALAKQENMRIISI-GPE-----TGRSGSEIKRNLQEA 865
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 463 YGPPGTGKTLIARAVANETGAFFFLINGPE 552
+GP GTGKT +A+ ++ G F + N E
Sbjct: 1864 FGPAGTGKTESVKALGHQLGRFVLVFNCDE 1893
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANE 516
+L YGPPGTGKT A A +
Sbjct: 51 LLFYGPPGTGKTSAALAFCRQ 71
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 463 YGPPGTGKTLIARAVANETGAFFFLINGPE 552
+GP GTGKT +A+ ++ G F + N E
Sbjct: 1864 FGPAGTGKTESVKALGHQLGRFVLVFNCDE 1893
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 235 TDPSPFCIVAPDTVIHCDGEPIKREEEEE--ALNAVGYD 345
++P+P VAP+ + E + E+EE A+ +GYD
Sbjct: 153 SNPAPAADVAPEAAAPAEAEALTDEQEENVLAITGMGYD 191
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 412 PSLFKAIGVKPPRGILMYGPPGTGK-TLIARAVANETGAFFFLINGPEIMSKLAGESESN 588
PS I P R I++ GP G GK T++ RA+ +F F ++ + AGE E
Sbjct: 13 PSCQSFIRKMPCRPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPR-AGE-EHG 70
Query: 589 LRKAFEEADK 618
F E +K
Sbjct: 71 KHYYFTEKEK 80
>U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical
protein T10H10.2 protein.
Length = 574
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 690 FTVGFLSLWCNSIEFINEDNSRRVLVGFLKRL 595
F FL + CN+ F+NED+++ L+ + R+
Sbjct: 531 FPAKFLCVDCNAKGFLNEDDTQPFLIDYYSRI 562
>AF106581-7|ABC48241.1| 362|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 135 protein.
Length = 362
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 519 CFISNSTSNECFSGTRRPI 463
CF+ NS +NEC G+R I
Sbjct: 6 CFVCNSPANECHFGSRSQI 24
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 574 ESESNLRKAFEEADKNSPAIIFIDELDAI 660
++E +RK F++ DK+ I + EL A+
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAV 304
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 457 LMYGPPGTGKTLIARAV 507
L+ GPPGTGKT+++ +
Sbjct: 464 LIQGPPGTGKTVVSATI 480
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 457 LMYGPPGTGKTLIARAV 507
L+ GPPGTGKT+++ +
Sbjct: 464 LIQGPPGTGKTVVSATI 480
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 445 PRGILMYGPPGTGKTLI 495
PRGI +YG G GKT++
Sbjct: 90 PRGIYLYGSVGCGKTML 106
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,348,872
Number of Sequences: 27780
Number of extensions: 342014
Number of successful extensions: 1183
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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