Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0726
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 402 e-112
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 402 e-112
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 400 e-112
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 137 8e-33
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 136 1e-32
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 134 4e-32
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 129 2e-30
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 128 3e-30
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 128 3e-30
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 128 5e-30
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 125 3e-29
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 125 3e-29
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 124 8e-29
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 122 3e-28
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 120 7e-28
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 120 7e-28
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 120 9e-28
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 116 2e-26
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 113 8e-26
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 111 6e-25
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 110 1e-24
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 110 1e-24
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 110 1e-24
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 109 2e-24
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 109 2e-24
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 107 7e-24
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 107 7e-24
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 106 1e-23
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 106 1e-23
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 106 2e-23
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 104 5e-23
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 102 2e-22
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 102 3e-22
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 101 3e-22
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 101 5e-22
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 101 5e-22
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 100 8e-22
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 100 1e-21
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 99 1e-21
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 99 1e-21
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 99 2e-21
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 99 2e-21
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 99 2e-21
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 98 4e-21
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 97 7e-21
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 97 7e-21
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 97 1e-20
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 97 1e-20
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 97 1e-20
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 97 1e-20
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 96 2e-20
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 93 2e-19
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 88 6e-18
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 79 3e-15
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 77 9e-15
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 70 1e-12
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 69 4e-12
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 63 1e-10
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 63 1e-10
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 62 3e-10
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 61 6e-10
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 44 7e-05
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 44 1e-04
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 43 2e-04
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 42 4e-04
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 42 4e-04
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 42 4e-04
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 42 4e-04
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 42 4e-04
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 42 5e-04
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 42 5e-04
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 42 5e-04
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 41 7e-04
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 41 7e-04
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 41 7e-04
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 41 0.001
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 40 0.001
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 40 0.001
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 40 0.001
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 40 0.002
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 40 0.002
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 38 0.006
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 38 0.006
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 38 0.006
At5g67630.1 68418.m08527 DNA helicase, putative similar to RuvB-... 38 0.008
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 38 0.008
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 38 0.008
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 37 0.011
At3g49830.1 68416.m05448 DNA helicase-related similar to DNA hel... 37 0.011
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 37 0.011
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 37 0.015
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 36 0.020
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 36 0.020
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 35 0.045
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 35 0.045
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 35 0.045
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 33 0.14
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 33 0.14
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 33 0.18
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 33 0.18
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 29 0.19
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 33 0.24
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 33 0.24
At2g39730.3 68415.m04879 ribulose bisphosphate carboxylase/oxyge... 33 0.24
At2g39730.2 68415.m04878 ribulose bisphosphate carboxylase/oxyge... 33 0.24
At2g39730.1 68415.m04877 ribulose bisphosphate carboxylase/oxyge... 33 0.24
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 32 0.32
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 32 0.32
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 32 0.42
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 32 0.42
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 32 0.42
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 32 0.42
At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR... 31 0.56
At4g26090.1 68417.m03756 disease resistance protein RPS2 (CC-NBS... 31 0.56
At2g36380.1 68415.m04464 ABC transporter family protein related ... 31 0.56
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 31 0.97
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 31 0.97
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 31 0.97
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 31 0.97
At5g40060.1 68418.m04860 disease resistance protein (TIR-NBS-LRR... 30 1.3
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 30 1.3
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 30 1.3
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 30 1.3
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 30 1.3
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 30 1.3
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 30 1.3
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 30 1.3
At1g73170.1 68414.m08466 expressed protein 30 1.3
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 30 1.3
At1g04730.1 68414.m00469 AAA-type ATPase family protein contains... 30 1.3
At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT d... 30 1.7
At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR... 30 1.7
At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR... 30 1.7
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 30 1.7
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 29 2.2
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 29 2.2
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 29 2.2
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 29 3.0
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 29 3.0
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 29 3.0
At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR... 29 3.9
At5g01690.1 68418.m00086 cation/hydrogen exchanger, putative (CH... 29 3.9
At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive eff... 29 3.9
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 29 3.9
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 29 3.9
At1g73110.1 68414.m08453 ribulose bisphosphate carboxylase/oxyge... 29 3.9
At1g66090.1 68414.m07501 disease resistance protein (TIR-NBS cla... 29 3.9
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 29 3.9
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR... 29 3.9
At5g61560.1 68418.m07725 protein kinase family protein contains ... 28 5.2
At5g45050.2 68418.m05524 disease resistance protein-related simi... 28 5.2
At5g45050.1 68418.m05523 disease resistance protein-related simi... 28 5.2
At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR... 28 5.2
At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR... 28 5.2
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 28 5.2
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR... 28 5.2
At4g28070.1 68417.m04026 AFG1-like ATPase family protein contain... 28 5.2
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 28 5.2
At3g05790.1 68416.m00650 Lon protease, putative similar to Lon p... 28 5.2
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 28 5.2
At1g05990.1 68414.m00627 calcium-binding protein, putative stron... 28 5.2
At5g45200.1 68418.m05548 disease resistance protein (TIR-NBS-LRR... 28 6.8
At5g35970.1 68418.m04332 DNA-binding protein, putative similar t... 28 6.8
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 28 6.8
At4g27420.1 68417.m03941 ABC transporter family protein D.melano... 28 6.8
At3g25620.1 68416.m03189 ABC transporter family protein similar ... 28 6.8
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 28 6.8
At1g61950.1 68414.m06988 calcium-dependent protein kinase, putat... 28 6.8
At1g13280.1 68414.m01542 allene oxide cyclase family protein sim... 28 6.8
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 28 6.8
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 27 9.0
At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR... 27 9.0
At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR... 27 9.0
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 27 9.0
At3g21080.1 68416.m02665 ABC transporter-related contains 4 tran... 27 9.0
At3g20200.1 68416.m02560 protein kinase family protein contains ... 27 9.0
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 27 9.0
At2g41860.2 68415.m05174 calcium-dependent protein kinase, putat... 27 9.0
At2g41860.1 68415.m05173 calcium-dependent protein kinase, putat... 27 9.0
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 27 9.0
At1g64030.1 68414.m07252 serpin family protein / serine protease... 27 9.0
At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR... 27 9.0
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 402 bits (990), Expect = e-112
Identities = 179/230 (77%), Positives = 213/230 (92%)
Frame = +1
Query: 1 NNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRD 180
+NLRVRL DV+S+ CP VKYGKRVHILP+DD+VEG+TGNLF+ YLKPYF+EAYRP+ +
Sbjct: 94 SNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKG 153
Query: 181 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 360
D F+VRGGMR+VEFKV+ETDP+ +C+VAPDT I C+GEP+KRE+EE L+ VGYDD+GG
Sbjct: 154 DLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEER-LDEVGYDDVGGV 212
Query: 361 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 540
RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GIL+YGPPG+GKTLIARAVANETGAFFF I
Sbjct: 213 RKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCI 272
Query: 541 NGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
NGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDE+D+IAPKREKT+GE
Sbjct: 273 NGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE 322
Score = 128 bits (310), Expect = 3e-30
Identities = 57/131 (43%), Positives = 89/131 (67%)
Frame = +1
Query: 304 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 468 RETVVEVPN-VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 526
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 664 PKREKTHGEXG 696
+R + G+ G
Sbjct: 587 TQRGNSAGDAG 597
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 402 bits (989), Expect = e-112
Identities = 179/230 (77%), Positives = 213/230 (92%)
Frame = +1
Query: 1 NNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRD 180
+NLRVRL DV+S+ CP VKYGKRVHILP+DD+VEG+TGNLF+ YLKPYF+EAYRP+ +
Sbjct: 94 SNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKG 153
Query: 181 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 360
D F+VRGGMR+VEFKV+ETDP+ +C+VAPDT I C+GEP+KRE+EE L+ VGYDD+GG
Sbjct: 154 DLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEER-LDDVGYDDVGGV 212
Query: 361 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 540
RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GIL+YGPPG+GKTLIARAVANETGAFFF I
Sbjct: 213 RKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCI 272
Query: 541 NGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
NGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDE+D+IAPKREKT+GE
Sbjct: 273 NGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE 322
Score = 125 bits (301), Expect = 3e-29
Identities = 57/131 (43%), Positives = 87/131 (66%)
Frame = +1
Query: 304 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 468 RETVVEVPN-VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 526
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 664 PKREKTHGEXG 696
+R G G
Sbjct: 587 TQRGGGSGGDG 597
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 400 bits (984), Expect = e-112
Identities = 176/230 (76%), Positives = 212/230 (92%)
Frame = +1
Query: 1 NNLRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRD 180
+NLRVRL DV+S+ CP VKYG RVHILP+DD++EG++GN+F+ YLKPYF+EAYRP+ +
Sbjct: 95 SNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPYFLEAYRPVRKG 154
Query: 181 DTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGC 360
D F+VRGGMR++EFKV+ETDP+ +C+VAPDT I C+GEPIKRE+EE L+ VGYDD+GG
Sbjct: 155 DLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEER-LDEVGYDDVGGV 213
Query: 361 RKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLI 540
RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GIL+YGPPG+GKTLIARAVANETGAFFF I
Sbjct: 214 RKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCI 273
Query: 541 NGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
NGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDE+D+IAPKREKTHGE
Sbjct: 274 NGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
Score = 128 bits (310), Expect = 3e-30
Identities = 58/131 (44%), Positives = 89/131 (67%)
Frame = +1
Query: 304 REEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 469 RETVVEVPN-VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 527
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
Query: 664 PKREKTHGEXG 696
+R + G+ G
Sbjct: 588 TQRGNSVGDAG 598
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 137 bits (331), Expect = 8e-33
Identities = 64/113 (56%), Positives = 80/113 (70%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+L+YGPPGTGKT++A+AVAN
Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
T A F + G E + K GE +R F A +N+PAIIFIDE+DAIA R
Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR 264
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 136 bits (330), Expect = 1e-32
Identities = 62/137 (45%), Positives = 89/137 (64%)
Frame = +1
Query: 274 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 453
++ + +P+ + E Y DIGG Q+ +IKE VELPL HP L++ IG+KPP+G
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 633
+++YG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+I
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
Query: 634 IFIDELDAIAPKREKTH 684
+FIDE+DA+ KR H
Sbjct: 285 VFIDEIDAVGTKRYDAH 301
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 134 bits (325), Expect = 4e-32
Identities = 61/133 (45%), Positives = 88/133 (66%)
Frame = +1
Query: 274 VIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 453
++ + +P+ + E Y DIGG Q+ +IKE VELPL HP L++ IG+KPP+G
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAI 633
+++YG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SP+I
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
Query: 634 IFIDELDAIAPKR 672
+FIDE+DA+ KR
Sbjct: 285 VFIDEIDAVGTKR 297
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 129 bits (312), Expect = 2e-30
Identities = 56/111 (50%), Positives = 77/111 (69%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y DIGGC++Q+ +I+E+VELP+ HP F +G+ PP+G+L YGPPG+GKTL+ARAVAN T
Sbjct: 204 YSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRT 263
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
GA F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 264 GACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGAR 314
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 128 bits (310), Expect = 3e-30
Identities = 55/119 (46%), Positives = 86/119 (72%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEXG 696
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R ++ G
Sbjct: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 128 bits (310), Expect = 3e-30
Identities = 55/119 (46%), Positives = 86/119 (72%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEXG 696
F ++G E++ K GE +R+ F A +++P+IIF+DE+D+I R ++ G
Sbjct: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 128 bits (308), Expect = 5e-30
Identities = 55/113 (48%), Positives = 78/113 (69%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN
Sbjct: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 125 bits (301), Expect = 3e-29
Identities = 54/111 (48%), Positives = 78/111 (70%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y+DIGG KQ+ ++ E + LP+ H F+ +GV+PP+G+L+YGPPGTGKTL+ARA A +T
Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A F + GP+++ G+ +R AF+ A + +P IIFIDE+DAI KR
Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKR 280
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 125 bits (301), Expect = 3e-29
Identities = 59/129 (45%), Positives = 83/129 (64%)
Frame = +1
Query: 313 EEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTL 492
E E + D GG +K L +++ V P+ +P FK IGVKPP GIL +GPPG GKT
Sbjct: 223 EVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTK 282
Query: 493 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+A A+ANE G F+ I+ E++S ++G SE N+R+ F +A + +P+I+FIDE+DAI KR
Sbjct: 283 LANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR 342
Query: 673 EKTHGEXGK 699
E E K
Sbjct: 343 ENQQREMEK 351
Score = 110 bits (265), Expect = 7e-25
Identities = 52/115 (45%), Positives = 70/115 (60%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V +DD+GG Q + P++ P ++KA GV G L+YGPPG GKTLIA+A AN
Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAAN 584
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
E GA F I G E+++K GESE +R F+ A +P +IF DE+DA+ R K
Sbjct: 585 EAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGK 639
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 124 bits (298), Expect = 8e-29
Identities = 54/111 (48%), Positives = 77/111 (69%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANET 519
Y+DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPGTGKTL+ARA A +T
Sbjct: 169 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 228
Query: 520 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A F + GP+++ G+ +R AF A + SP IIFIDE+DAI KR
Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKR 279
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 122 bits (293), Expect = 3e-28
Identities = 57/115 (49%), Positives = 76/115 (66%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V ++D+GG + Q+ E VE P +H FK IG +PP GILM+GPPG KTL+ARAVA+
Sbjct: 721 VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS 780
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
E F + GPE+ SK GESE +R F +A N+P+IIF DE+D++A R K
Sbjct: 781 EAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGK 835
Score = 109 bits (261), Expect = 2e-24
Identities = 49/110 (44%), Positives = 77/110 (70%)
Frame = +1
Query: 349 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAF 528
+GG K+ A ++++++ SL ++G++P +G+L++GPPGTGKT +AR A +G
Sbjct: 387 LGGLSKEYAILRDIIDSSSIKNSL-SSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVN 445
Query: 529 FFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
FF +NGPEI+S+ GESE L + F A +PA++FID+LDAIAP R++
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKE 495
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 120 bits (290), Expect = 7e-28
Identities = 54/127 (42%), Positives = 81/127 (63%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 471
+P+ E + Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+L+YGP
Sbjct: 122 DPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 181
Query: 472 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 651
PGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P IIF+DE+
Sbjct: 182 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEI 241
Query: 652 DAIAPKR 672
DAI +R
Sbjct: 242 DAIGGRR 248
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 120 bits (290), Expect = 7e-28
Identities = 54/127 (42%), Positives = 81/127 (63%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 471
+P+ E + Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+L+YGP
Sbjct: 122 DPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 181
Query: 472 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 651
PGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P IIF+DE+
Sbjct: 182 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEI 241
Query: 652 DAIAPKR 672
DAI +R
Sbjct: 242 DAIGGRR 248
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 120 bits (289), Expect = 9e-28
Identities = 56/118 (47%), Positives = 80/118 (67%), Gaps = 5/118 (4%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV-- 507
+ +DDIGG + + +KEMV PL +P F + + PPRG+L+ GPPGTGKTLIARA+
Sbjct: 378 INFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALAC 437
Query: 508 -ANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A++ G F++ G +++SK GE+E L+ FEEA +N P+IIF DE+D +AP R
Sbjct: 438 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 495
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 116 bits (278), Expect = 2e-26
Identities = 54/113 (47%), Positives = 74/113 (65%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V +DD+GG I + V+LPL H LF + G++ G+L+YGPPGTGKTL+A+AVA
Sbjct: 655 VKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVAT 713
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E F + GPE+++ GESE N+R FE+A P +IF DELD++AP R
Sbjct: 714 ECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPAR 766
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 113 bits (273), Expect = 8e-26
Identities = 56/115 (48%), Positives = 77/115 (66%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V + DIG + ++E+V LPLR P LFK +KP RGIL++GPPGTGKT++A+A+AN
Sbjct: 411 VTFADIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIAN 470
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
E GA F ++ I SK GE E N+R F A K SP IIF+DE+D++ +R +
Sbjct: 471 EAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTR 525
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 111 bits (266), Expect = 6e-25
Identities = 49/125 (39%), Positives = 80/125 (64%)
Frame = +1
Query: 301 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 480
K E + V + D+ G + + +++E+V+ L++P LF +G+KPP G+L+ GPPG
Sbjct: 416 KAEARVDGSTGVKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGC 474
Query: 481 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 660
GKTL+A+A+A E G F+ + G E + L G + +R F+ A N P++IFIDE+DA+
Sbjct: 475 GKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDAL 534
Query: 661 APKRE 675
A +R+
Sbjct: 535 ATRRQ 539
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 110 bits (264), Expect = 1e-24
Identities = 51/124 (41%), Positives = 77/124 (62%)
Frame = +1
Query: 301 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 480
K + + E V +DD+ G + E+VE L+ P F A+G K P+G+L+ GPPGT
Sbjct: 213 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGT 271
Query: 481 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 660
GKTL+A+A+A E G FF I+G E + G S +R F++A +N+P I+F+DE+DA+
Sbjct: 272 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 331
Query: 661 APKR 672
+R
Sbjct: 332 GRQR 335
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 110 bits (264), Expect = 1e-24
Identities = 56/120 (46%), Positives = 78/120 (65%)
Frame = +1
Query: 319 EALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIA 498
E +N V + DIG + ++E+V LPLR P LF +KP RGIL++GPPGTGKT++A
Sbjct: 514 EEIN-VTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLA 572
Query: 499 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
+A+A E GA F ++ I SK GE E N+R F A K SP IIF+DE+D++ +R +
Sbjct: 573 KAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTR 632
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 110 bits (264), Expect = 1e-24
Identities = 56/120 (46%), Positives = 78/120 (65%)
Frame = +1
Query: 319 EALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIA 498
E +N V + DIG + ++E+V LPLR P LF +KP RGIL++GPPGTGKT++A
Sbjct: 509 EEIN-VTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLA 567
Query: 499 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
+A+A E GA F ++ I SK GE E N+R F A K SP IIF+DE+D++ +R +
Sbjct: 568 KAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLASKVSPTIIFVDEVDSMLGQRTR 627
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 109 bits (262), Expect = 2e-24
Identities = 54/115 (46%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF-KAIGVKPPRGILMYGPPGTGKTLIARAVA 510
V +DDIG +KE+V LPL+ P LF K KP +GIL++GPPGTGKT++A+AVA
Sbjct: 960 VSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1019
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
E GA F I+ I SK GE E ++ F A K +P++IF+DE+D++ +RE
Sbjct: 1020 TEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRE 1074
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 109 bits (261), Expect = 2e-24
Identities = 50/124 (40%), Positives = 77/124 (62%)
Frame = +1
Query: 301 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 480
K + + E V +DD+ G + E+VE L+ P F A+G + P+G+L+ GPPGT
Sbjct: 206 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 264
Query: 481 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 660
GKTL+A+A+A E G FF I+G E + G S +R F++A +N+P I+F+DE+DA+
Sbjct: 265 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 324
Query: 661 APKR 672
+R
Sbjct: 325 GRQR 328
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 107 bits (257), Expect = 7e-24
Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF-KAIGVKPPRGILMYGPPGTGKTLIARAVA 510
V +DDIG K +KE+V LPL+ P LF K KP +GIL++GPPGTGKT++A+AVA
Sbjct: 817 VTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVA 876
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
E A F I+ I SK GE E ++ F A K SP++IF+DE+D++ +RE
Sbjct: 877 KEADANFINISMSSITSKWFGEGEKYVKAVFSLASKMSPSVIFVDEVDSMLGRRE 931
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 107 bits (257), Expect = 7e-24
Identities = 54/138 (39%), Positives = 79/138 (57%)
Frame = +1
Query: 277 IHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGI 456
+ P K+ + VG+DD+ G ++ E+V L+ +K +G + PRG+
Sbjct: 314 LSASNSPAKKRRSKNP--TVGFDDVEGVDSAKDELVEIVSC-LQGSINYKKLGARLPRGV 370
Query: 457 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII 636
L+ GPPGTGKTL+ARAVA E G FF ++ E + G + +R F A KNSP+II
Sbjct: 371 LLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSII 430
Query: 637 FIDELDAIAPKREKTHGE 690
FIDELDA+ KR ++ +
Sbjct: 431 FIDELDAVGGKRGRSFND 448
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 106 bits (255), Expect = 1e-23
Identities = 49/113 (43%), Positives = 72/113 (63%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V +DD+GG + ++++ VE P++H + F +G+ P RGIL++GPPG KT +A+A AN
Sbjct: 283 VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAAN 342
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
A FF ++ E+ S GE E+ LR F+ A SP+IIF DE D +A KR
Sbjct: 343 AAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKR 395
Score = 103 bits (246), Expect = 2e-22
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Frame = +1
Query: 346 DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGA 525
+IGG + L ++E++ P R+P + +G+K PRG+L+YGPPGTGKT + RAV E A
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 526 FFFLINGPEIMSKLAGESESNLRKAFEEADKNS----PAIIFIDELDAIAPKRE 675
+++ + AGESE LR+AF EA ++ P++IFIDE+D + P+R+
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRD 136
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 106 bits (255), Expect = 1e-23
Identities = 53/115 (46%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF-KAIGVKPPRGILMYGPPGTGKTLIARAVA 510
V + DIG +KE+V LPL+ P LF K KP +GIL++GPPGTGKT++A+AVA
Sbjct: 947 VSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1006
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
E GA F I+ I SK GE E ++ F A K +P++IF+DE+D++ +RE
Sbjct: 1007 TEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRE 1061
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 106 bits (254), Expect = 2e-23
Identities = 50/124 (40%), Positives = 74/124 (59%)
Frame = +1
Query: 301 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 480
K + + E + ++D+ G + +E+VE L+ P F A+G K P+G+L+ GPPGT
Sbjct: 209 KAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGT 267
Query: 481 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 660
GKTL+A+A+A E G FF ++G E + G S R F +A NSP I+FIDE+DA+
Sbjct: 268 GKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCIVFIDEIDAV 327
Query: 661 APKR 672
R
Sbjct: 328 GRMR 331
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 104 bits (250), Expect = 5e-23
Identities = 49/120 (40%), Positives = 75/120 (62%)
Frame = +1
Query: 313 EEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTL 492
++ + N + + D+ GC + +I E V L++P ++ +G K P+G L+ GPPGTGKTL
Sbjct: 312 DKHSKNKIYFKDVAGCDEAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTL 370
Query: 493 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+A+A A E+G F I+G + M G S +R F+EA + +P+IIFIDE+DAI R
Sbjct: 371 LAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRAR 430
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 102 bits (245), Expect = 2e-22
Identities = 48/120 (40%), Positives = 74/120 (61%)
Frame = +1
Query: 313 EEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTL 492
++ + N + + D+ GC + +I E V L++P ++ +G K P+G L+ GPPGTGKTL
Sbjct: 317 DKNSKNKIYFKDVAGCEEAKQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTGKTL 375
Query: 493 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+A+A A E+ F I+G + M G S +R F+EA + +P+IIFIDE+DAI R
Sbjct: 376 LAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRAR 435
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 102 bits (244), Expect = 3e-22
Identities = 51/124 (41%), Positives = 72/124 (58%)
Frame = +1
Query: 328 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
N + D+ GC +++E+VE L++PS F +G K P+GIL+ G PGTGKTL+A+A+
Sbjct: 357 NVKTFKDVKGCDDAKQELEEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 415
Query: 508 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG 687
A E G FF G E G +R F+ A K +P IIFIDE+DA+ R++ G
Sbjct: 416 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 475
Query: 688 EXGK 699
K
Sbjct: 476 HTKK 479
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 101 bits (243), Expect = 3e-22
Identities = 49/124 (39%), Positives = 74/124 (59%)
Frame = +1
Query: 301 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 480
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G L+ GPPGT
Sbjct: 248 KSKFQEVPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 306
Query: 481 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 660
GKTL+ARAVA E G FF E + G S +R FE+A +P I+FIDE+DA+
Sbjct: 307 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 366
Query: 661 APKR 672
+R
Sbjct: 367 GRQR 370
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 101 bits (242), Expect = 5e-22
Identities = 49/124 (39%), Positives = 74/124 (59%)
Frame = +1
Query: 301 KREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGT 480
K + +E V + D+ G + +++E+V+ L++P + A+G K P+G L+ GPPGT
Sbjct: 236 KSKFQEVPETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGT 294
Query: 481 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAI 660
GKTL+ARAVA E G FF E + G S +R FE+A +P I+FIDE+DA+
Sbjct: 295 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 354
Query: 661 APKR 672
+R
Sbjct: 355 GRQR 358
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 101 bits (242), Expect = 5e-22
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 471
E I + E G+D + G +KE+V +PL +P F +G+ PPRGIL++G
Sbjct: 702 EYIGGSDSESGKAFEGWDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGH 761
Query: 472 PGTGKTLIARAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII 636
PGTGKTL+ RA+ +F G + + K G++E LR F+ A+K P+II
Sbjct: 762 PGTGKTLVVRALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSII 821
Query: 637 FIDELDAIAPKREK 678
F DE+D +APKR +
Sbjct: 822 FFDEIDGLAPKRSR 835
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 100 bits (240), Expect = 8e-22
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF-KAIGVKPPRGILMYGPPGTGKTLIARAVA 510
V +DDIG + E+V LP+R P LF + ++P +GIL++GPPGTGKTL+A+A+A
Sbjct: 147 VKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALA 206
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E GA F I G + SK G++E + F A K +P IIF+DE+D++ R
Sbjct: 207 TEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGAR 260
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 100 bits (239), Expect = 1e-21
Identities = 48/122 (39%), Positives = 75/122 (61%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V + D+ G K +++E+V+ H +++ GVK P GIL+ GPPG GKTL+A+AVA
Sbjct: 407 VKFTDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAG 465
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEX 693
E G FF I+ + + G S +R ++EA +N+P+++FIDELDA+ +R G
Sbjct: 466 EAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGSG 525
Query: 694 GK 699
G+
Sbjct: 526 GQ 527
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 99 bits (238), Expect = 1e-21
Identities = 47/113 (41%), Positives = 67/113 (59%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+G++D+GG IKEM+ELP + P +F ++ +L+YGPPG GKT I A A
Sbjct: 841 LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
F + GPE+++K G SE +R F +A +P I+F DE D+IAPKR
Sbjct: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKR 953
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVA------NETGAFFFLINGPEIMSKLAGESE 582
F + P IL+YGPPG+GKT++ARA A + A L++ + +
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIH 644
Query: 583 SNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG 687
L E +++P++I +D+LD+I T G
Sbjct: 645 HVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEG 679
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 99 bits (238), Expect = 1e-21
Identities = 51/119 (42%), Positives = 71/119 (59%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V +DDI G + EMV PL P +FK P +G+L++GPPGTGKT+I +A+A
Sbjct: 7 VRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCR-SPGKGLLLFGPPGTGKTMIGKAIAG 65
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
E A FF I+ + SK GE E +R F A PA+IF+DE+D++ +R K+ GE
Sbjct: 66 EAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQR-KSDGE 123
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 99.1 bits (236), Expect = 2e-21
Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
Frame = +1
Query: 307 EEEEEALNA-VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTG 483
EE + ++++ + D+ G + A+++E+V LR P F +G K P+G+L+ GPPGTG
Sbjct: 214 EEVQPSMDSSTKFSDVKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTG 272
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIA 663
KT++ARA+A E G FF +G E G +R F A K SP IIFIDE+DAI
Sbjct: 273 KTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIG 332
Query: 664 PKR 672
R
Sbjct: 333 GSR 335
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 99.1 bits (236), Expect = 2e-21
Identities = 50/113 (44%), Positives = 72/113 (63%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
V +DD+ G + ++E V LPL P F+ I +P +G+LM+GPPGTGKTL+A+AVA
Sbjct: 236 VRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIR-RPWKGVLMFGPPGTGKTLLAKAVAT 294
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E G FF ++ + SK GESE +R F+ A +P+ IFIDE+D++ R
Sbjct: 295 ECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 99.1 bits (236), Expect = 2e-21
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF-KAIGVKPPRGILMYGPPGTGKTLIARAVA 510
V ++DIG + E+V LP+R P LF + ++P +GIL++GPPGTGKTL+A+A+A
Sbjct: 348 VKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALA 407
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E GA F I G + SK G++E + F A K +P IIF+DE+D++ R
Sbjct: 408 TEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAPVIIFVDEIDSLLGAR 461
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 98.3 bits (234), Expect = 4e-21
Identities = 46/123 (37%), Positives = 75/123 (60%)
Frame = +1
Query: 331 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 510
+V +DD+ G + EMV LP + LF + +P RG+L++GPPG GKT++A+AVA
Sbjct: 212 SVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVA 270
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
+E+ A FF ++ + SK GE+E ++ F+ A P++IF+DE+D+I R + E
Sbjct: 271 SESQATFFNVSASSLTSKWVGEAEKLVKTLFQVAISRQPSVIFMDEIDSIMSTRSTSENE 330
Query: 691 XGK 699
+
Sbjct: 331 ASR 333
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 97.5 bits (232), Expect = 7e-21
Identities = 45/113 (39%), Positives = 74/113 (65%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ ++ I G +KE V +P+++P+ F + + P +GIL++GPPGTGKT++A+AVA
Sbjct: 109 IKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVAT 167
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E FF I+ ++SK G+SE +R F+ A ++P+ IF+DE+DAI +R
Sbjct: 168 ECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQR 220
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 97.5 bits (232), Expect = 7e-21
Identities = 45/113 (39%), Positives = 74/113 (65%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ ++ I G +KE V +P+++P+ F + + P +GIL++GPPGTGKT++A+AVA
Sbjct: 100 IKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVAT 158
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E FF I+ ++SK G+SE +R F+ A ++P+ IF+DE+DAI +R
Sbjct: 159 ECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIISQR 211
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 97.1 bits (231), Expect = 1e-20
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIG--VKPPRGILMYGPPGTGKTLIARAV 507
V + IGG + E+V LPL+ P LF A G + P +G+L+YGPPGTGKT++A+A+
Sbjct: 81 VEFGSIGGLETIKQALYELVILPLKRPELF-AYGKLLGPQKGVLLYGPPGTGKTMLAKAI 139
Query: 508 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG 687
A E+GA F + +MSK G+++ + F A K PAIIFIDE+++ +R T
Sbjct: 140 AKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVESFLGQRRSTDH 199
Query: 688 E 690
E
Sbjct: 200 E 200
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 97.1 bits (231), Expect = 1e-20
Identities = 46/114 (40%), Positives = 70/114 (61%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ + D+ G + +++E+VE LR+P + +G +PPRG+L+ G PGTGKTL+A+AVA
Sbjct: 322 ITFADVAGVDEAKEELEEIVEF-LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAG 380
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
E F + E + G S +R F A K +P+IIFIDE+DA+A R+
Sbjct: 381 EAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 434
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/114 (39%), Positives = 71/114 (62%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ + D+ G + +++E+VE L++P + +G +PPRG+L+ G PGTGKTL+A+AVA
Sbjct: 326 ITFADVAGVDEAKEELEEIVEF-LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAG 384
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKRE 675
E+ F + E + G S +R F A K +P+IIFIDE+DA+A R+
Sbjct: 385 ESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRD 438
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIG--VKPPRGILMYGPPGTGKTLIARAV 507
V + IGG + E+V LPL+ P LF A G + P +G+L+YGPPGTGKT++A+A+
Sbjct: 84 VEFGSIGGLESIKQALYELVILPLKRPELF-AYGKLLGPQKGVLLYGPPGTGKTMLAKAI 142
Query: 508 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHG 687
A E+ A F + +MSK G+++ + F A K PAIIFIDE+D+ +R T
Sbjct: 143 ARESEAVFINVKVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDN 202
Query: 688 E 690
E
Sbjct: 203 E 203
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/118 (38%), Positives = 72/118 (61%)
Frame = +1
Query: 319 EALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIA 498
E V +DD G +++E+V + L++ F+ G+ P+G+L++GPPGTGKTL+A
Sbjct: 308 EEKTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLA 366
Query: 499 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
+A+A E G FF NG + + G + S ++ F + +P+IIFIDE+DAI KR
Sbjct: 367 KAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKR 424
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 92.7 bits (220), Expect = 2e-19
Identities = 43/113 (38%), Positives = 70/113 (61%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ + D+ G ++E V LP++ P F +P R L+YGPPGTGK+ +A+AVA
Sbjct: 129 IKWSDVAGLESAKQALQEAVILPVKFPQFFTGKR-RPWRAFLLYGPPGTGKSYLAKAVAT 187
Query: 514 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
E + FF ++ +++SK GESE + FE A +++P+IIF+DE+D++ R
Sbjct: 188 EADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAPSIIFVDEIDSLCGTR 240
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family
Length = 1025
Score = 87.8 bits (208), Expect = 6e-18
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Frame = +1
Query: 334 VGYDDIGGCRKQLAQIKEMVELPLRHPSLF-KAIGVKPPRGILMYGPPGTGKTLIARAVA 510
V +DDIG +KE+V LP + P LF K KP GIL++GP GTGKT++A+AVA
Sbjct: 732 VTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVA 791
Query: 511 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPK-REKTHG 687
E GA LIN MS+ E E ++ F A K SP+IIF+DE++++ + R KT
Sbjct: 792 TEAGA--NLIN--MSMSRWFSEGEKYVKAVFSLASKISPSIIFLDEVESMLHRYRLKTKN 847
Query: 688 E 690
E
Sbjct: 848 E 848
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 79.0 bits (186), Expect = 3e-15
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Frame = +1
Query: 316 EEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAI--GVKP------PRGILMYGP 471
+++++ + +D+I G +Q +I++ + + L P ++ I G + PR +L GP
Sbjct: 310 DDSMDEISWDNIAGYDQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGP 369
Query: 472 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK-NSPAIIFIDE 648
PGTGKT AR +AN+ G + +MSK GESE L F +A++ AIIF+DE
Sbjct: 370 PGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANELPDGAIIFLDE 429
Query: 649 LDAIAPKRE 675
+DA A R+
Sbjct: 430 IDAFAISRD 438
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 77.4 bits (182), Expect = 9e-15
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 10/126 (7%)
Frame = +1
Query: 349 IGGCRKQLAQI-KEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE-TG 522
IGG + A I + + P + +G+K +G+L++GPPGTGKTL+AR + G
Sbjct: 217 IGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNG 276
Query: 523 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPA--------IIFIDELDAIAPKREK 678
++NGPE++SK GE+E N+R F +A+++ +I DE+DAI R
Sbjct: 277 KDPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGS 336
Query: 679 THGEXG 696
T G
Sbjct: 337 TRDGTG 342
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 457 LMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE-SNLRKAFEEADKNSPAI 633
L+ GP G+GKT +A + ++ + I E M L+ ++ +++ K FE+A K+ +I
Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593
Query: 634 IFIDELDAI 660
I +D+++ +
Sbjct: 594 IILDDIERL 602
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM-SKLAGESESNLRKAFEEADKNS 624
RG+L+ GPPGTGKTL AR +A E+G F +G E S+ +G ++ N + F A +N+
Sbjct: 527 RGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKIN--EMFSIARRNA 584
Query: 625 PAIIFIDELDAIAPKREK 678
PA +F+DE+DAIA + +
Sbjct: 585 PAFVFVDEIDAIAGRHAR 602
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +1
Query: 376 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEI 555
+I E+V L++P F+ +G + PRG+L+ G GTGKT +A A+A E + E+
Sbjct: 435 EINEVVAF-LQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQEL 493
Query: 556 MSKL-AGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREK 678
+ L G+S +N+R+ F+ A +P IIF+++ D A R K
Sbjct: 494 EAGLWVGQSAANVRELFQTARDLAPVIIFVEDFDLFAGVRGK 535
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 442 PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK- 618
P R ++ YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K
Sbjct: 369 PFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGSQAVTKIHQIFDWAKKS 427
Query: 619 NSPAIIFIDELDAIAPKREKTH 684
N ++FIDE DA +R T+
Sbjct: 428 NKGLLLFIDEADAFLCERNSTY 449
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 442 PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK- 618
P R ++ YGPPGTGKT++AR +A ++G + ++ G ++ + L ++ + + + F+ A K
Sbjct: 384 PFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDV-APLGAQAVTKIHEIFDWAKKS 442
Query: 619 NSPAIIFIDELDAIAPKREKTH 684
N ++FIDE DA +R T+
Sbjct: 443 NKGLLLFIDEADAFLCERNSTY 464
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 442 PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 621
P R IL YGPPGTGKT+ AR +A +G + L+ G ++ + L ++ + + + F+ + K+
Sbjct: 397 PFRNILFYGPPGTGKTMAARELARRSGLDYALMTGGDV-APLGAQAVTKIHQLFDWSKKS 455
Query: 622 SPA-IIFIDELDAIAPKREKTH 684
++FIDE DA +R KT+
Sbjct: 456 KRGLLLFIDEADAFLCERNKTY 477
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 442 PPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 621
P R IL++GPPGTGKT+ AR +A ++G + L+ G ++ + L ++ + + + F+ K+
Sbjct: 396 PFRNILLHGPPGTGKTMAARELARKSGLDYALMTGGDV-APLGAQAVTKIHELFDWGKKS 454
Query: 622 SPA-IIFIDELDAIAPKREKTH 684
++FIDE DA +R KT+
Sbjct: 455 KRGLLLFIDEADAFLCERNKTY 476
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 44.4 bits (100), Expect = 7e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 403 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+R +K +G RG L+YGPPGTGKT + A+AN
Sbjct: 231 IRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIAN 267
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFEEADKNSP 627
IL+ GP G+GKTL+A+ +A F + + + + GE ES L K AD N
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVA 285
Query: 628 A----IIFIDELDAIAPKRE 675
A I++IDE+D I K E
Sbjct: 286 AAQQGIVYIDEVDKITKKAE 305
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 7/135 (5%)
Frame = +1
Query: 313 EEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTL 492
E+E N VG ++ + QL + + + L R +L IG + P + G PGTGKT+
Sbjct: 204 EDELSNIVGLSEL---KTQLRKWAKGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTM 260
Query: 493 IARAVANETGAFFFL-------INGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDEL 651
+AR + L + +++ + G + R+ +EA+ I+F+DE
Sbjct: 261 VARVLGKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKIQEAE---GGILFVDEA 317
Query: 652 DAIAPKREKTHGEXG 696
+ P ++ + G
Sbjct: 318 YRLIPMQKADDKDYG 332
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 627
RG L+YGPPGTGK+ + A+AN G + + E+ S S LRK + +S
Sbjct: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HSNSELRKLLMKT--SSK 289
Query: 628 AIIFIDELD 654
+II I+++D
Sbjct: 290 SIIVIEDID 298
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 403 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+R +K +G RG L+YGPPGTGK+ + A+AN
Sbjct: 239 IRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 275
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 403 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+R +K +G RG L+YGPPGTGK+ + A+AN
Sbjct: 239 IRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 275
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP 627
RG L+YGPPGTGK+ + A+AN G + + E+ ++ S LRK + +S
Sbjct: 239 RGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEV------QNNSELRKLLMKT--SSK 290
Query: 628 AIIFIDELD 654
+II I+++D
Sbjct: 291 SIIVIEDID 299
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/104 (27%), Positives = 51/104 (49%)
Frame = +1
Query: 379 IKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM 558
+ E ++ ++ +K +G RG L+YGPPGTGK+ + A+AN F I E+
Sbjct: 277 VMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANHLN---FDIYDLEL- 332
Query: 559 SKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
A + S LR+ S I+ ++++D +++T E
Sbjct: 333 --TAVNNNSELRRLLIATANRS--ILIVEDIDCSLELKDRTSDE 372
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
FK +G RG L+YGPPGTGK+ + A+AN
Sbjct: 23 FKTVGRAWKRGYLLYGPPGTGKSSLVAAIAN 53
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 376 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+I + +E L+ +K +G RG L+YGPPGTGK+ + A+AN
Sbjct: 220 KIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 265
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
FK++G RG L+YGPPGTGK+ + A+AN
Sbjct: 231 FKSVGRAWKRGYLLYGPPGTGKSSMVAAIAN 261
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 41.1 bits (92), Expect = 7e-04
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 600
+K IG RG L+YGPPGTGK+ + A+AN + I E+ A ++ S LRK
Sbjct: 228 YKKIGKAWKRGYLLYGPPGTGKSTMIAAMAN---LLNYSIYDLEL---TAIQNNSELRKI 281
Query: 601 FEEADKNSPAIIFIDELDA---IAPKREK 678
S II I+++D + KR+K
Sbjct: 282 LTATSNKS--IIVIEDIDCSLDLTGKRKK 308
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +1
Query: 376 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+I + +E L+ +K +G RG L+YGPPGTGK+ + A+AN
Sbjct: 221 KIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 266
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK--LAGESESNLRKAFEEADKNSP 627
+L+ GP G+GKTL+A+ +A F + + + + + ES L K A+ N
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQ 370
Query: 628 A----IIFIDELDAIAPKRE 675
A I++IDE+D I K E
Sbjct: 371 AAQQGIVYIDEVDKITKKAE 390
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/109 (23%), Positives = 48/109 (44%)
Frame = +1
Query: 310 EEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKT 489
++++ L A G + +K E + L P + + G PP +++ GPPG GK+
Sbjct: 38 DKQKNLKAFGVKSVVHAKKAKHHAAEKEQKRLHLPKIDRNYGEAPPFVVVVQGPPGVGKS 97
Query: 490 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAII 636
L+ +++ E F N PE+ + R F E + A++
Sbjct: 98 LVIKSLVKE----FTKQNVPEVRGPITIVQGKQRRFQFVECPNDINAMV 142
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 600
+K IG RG L+YGPPGTGK+ + A+AN + I E+ A ++ S L+K
Sbjct: 233 YKKIGKAWKRGYLLYGPPGTGKSTMISAMAN---LLNYNIYDLEL---TAVKNNSELKKL 286
Query: 601 FEEADKNSPAIIFIDELDAIA 663
+S +II I+++D A
Sbjct: 287 LTAT--SSKSIIVIEDIDCSA 305
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +1
Query: 415 SLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLR 594
S ++ G RG L+YGPPGTGK+ + A+AN + + E+ +S S LR
Sbjct: 227 SFYERTGRAWKRGYLLYGPPGTGKSSMIAAMANYLRYDIYDLELTEV------KSNSELR 280
Query: 595 KAFEEADKNSPAIIFIDELD 654
K + +S +II I+++D
Sbjct: 281 KLLMKT--SSKSIIVIEDID 298
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 600
+K +G RG L++GPPGTGK+ + A+AN FL + + S L+K
Sbjct: 235 YKKVGKPWKRGYLLFGPPGTGKSTMIAAIAN------FLDYDVYDLELTTVKDNSELKKL 288
Query: 601 FEEADKNSPAIIFIDELD 654
D S +II I+++D
Sbjct: 289 L--LDTTSKSIIVIEDID 304
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 600
+K IG RG L++GPPGTGK+ + A+AN + I E+ A + S LRK
Sbjct: 228 YKKIGKAWKRGYLLHGPPGTGKSTMIAAMANHLN---YSIYDLEL---TAIRNNSELRKL 281
Query: 601 FEEADKNSPAIIFIDELDA---IAPKREK 678
+S +II I+++D + KR+K
Sbjct: 282 LTAT--SSKSIIVIEDIDCSLDLTGKRKK 308
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+K +G RG L+YGPPGTGK+ + A+AN
Sbjct: 237 YKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 267
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANETGAFFFLINGPEI-MSKLAGES-ESNLRKAFE----EAD 615
+L+ GP G+GKTL+A+ +A F + + + + GE ES L K + +
Sbjct: 265 VLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLYVVSGCNVE 324
Query: 616 KNSPAIIFIDELDAIAPKREKTHG 687
+ I++IDE+D + K ++G
Sbjct: 325 EAQRGIVYIDEVDKMTMKSHSSNG 348
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+K IG RG L++GPPGTGK+ + A+AN
Sbjct: 235 YKKIGKAWKRGYLLFGPPGTGKSTMIAAMAN 265
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+K IG RG L++GPPGTGK+ + A+AN
Sbjct: 232 YKKIGKAWKRGYLLFGPPGTGKSTMIAAMAN 262
>At5g67630.1 68418.m08527 DNA helicase, putative similar to
RuvB-like DNA helicase reptin [Danio rerio] GI:27733814,
reptin [Drosophila melanogaster] GI:7243682
Length = 469
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 612
R IL+ G PGTGKT IA +A G F +I G EI S ++E+ L ++F +A
Sbjct: 67 RAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEA-LTQSFRKA 122
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 364 KQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
K + + E ++ ++ +K +G R +YGPPGTGK+ + A+AN
Sbjct: 193 KLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMAN 242
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 403 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
++ + +G RG L+YGPPGTGK+ + A+AN
Sbjct: 233 VQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIAN 269
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESE---SNLRKAFEEA 612
+ +L+ GPPGTGKT +A ++ E G+ F + G E+ S ++E N R+A
Sbjct: 67 KALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRAIGLR 126
Query: 613 DKNSPAIIFIDELDAIAPKR-EKTHGEXGK 699
K + ++ E+ ++P+ E G GK
Sbjct: 127 IKETKE-VYEGEVTELSPEETESLTGGYGK 155
>At3g49830.1 68416.m05448 DNA helicase-related similar to DNA
helicase GI:4521249 from [Mus musculus]
Length = 473
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFEEA 612
R IL+ G PGTGK IA +A G F +I G EI S ++E+ L +AF +A
Sbjct: 67 RAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEA-LTQAFRKA 122
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+ IG RG L+YGPPGTGK+ + A+AN
Sbjct: 228 YDRIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 19/105 (18%)
Frame = +1
Query: 418 LFKAIGVKPP-----RGILMYGPPGTGKTLIARAVANETG---------AFFFLINGPEI 555
LF GV P R IL++GPPGTGKT + +A+A + +N +
Sbjct: 188 LFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRCNSRYPHCQLIEVNAHSL 247
Query: 556 MSKLAGESESNLRKAFEE-----ADKNSPAIIFIDELDAIAPKRE 675
SK ES + K F++ + + + IDE++++A R+
Sbjct: 248 FSKWFSESGKLVAKLFQKIQEMVEEDGNLVFVLIDEVESLAAARK 292
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 36.3 bits (80), Expect = 0.020
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 12/89 (13%)
Frame = +1
Query: 430 IGVKPPRGILMYGPPGTGKTLIARAVANE--TGAFFFLINGPEIMS----------KLAG 573
+G + + G PG GKT IA +A +G I G ++++ K G
Sbjct: 290 LGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRG 349
Query: 574 ESESNLRKAFEEADKNSPAIIFIDELDAI 660
E E L+K EE ++ I+FIDE+ +
Sbjct: 350 EFEERLKKLMEEIRQSDEIILFIDEVHTL 378
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 421 FKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
++ +G RG L++GPPGTGK+ + A+AN
Sbjct: 231 YRKVGKPWKRGYLLFGPPGTGKSTMISAMAN 261
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANE--TGAFFFLINGPEIMS----------KLAGESESNLRKAF 603
+ G PG GKT IA +A +G I G +++ K GE E L+K
Sbjct: 321 LIGEPGVGKTAIAEGLAQRIASGDVPETIEGKTVITLDMGLLVAGTKYRGEFEERLKKLM 380
Query: 604 EEADKNSPAIIFIDELDAI 660
EE ++ I+FIDE+ +
Sbjct: 381 EEIRQSDEIILFIDEVHTL 399
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 35.1 bits (77), Expect = 0.045
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVAN 513
RG L++GPPGTGK+ + A+AN
Sbjct: 229 RGYLLFGPPGTGKSTMISAIAN 250
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 35.1 bits (77), Expect = 0.045
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +1
Query: 427 AIGVKPPRGILMYGPPGTGKTLIARAVANETG 522
++ V R +L+YGP G+GK+ + R +A+E+G
Sbjct: 347 SLAVSQKRPVLLYGPSGSGKSALIRKLADESG 378
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANE 516
+L YGPPGTGKT A A+A++
Sbjct: 33 MLFYGPPGTGKTTTALAIAHQ 53
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANE 516
+L YGPPGTGKT A A+A++
Sbjct: 45 MLFYGPPGTGKTTTALAIAHQ 65
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 403 LRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFF----FLINGPEIMSKLA 570
L+H S +IG R I++YG G GKT +A+ NE F FL N E K
Sbjct: 195 LQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPE 254
Query: 571 GES 579
G +
Sbjct: 255 GRT 257
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 376 QIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
++K +E L+ + +G R L+YGP GTGK+ A+AN
Sbjct: 208 KVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMAN 253
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 29.5 bits (63), Expect(2) = 0.19
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 391 VELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 513
+E ++ SL + + R + ++GP G GKT IARA+ N
Sbjct: 184 IEDHIKELSLLLCLESEEVRMVGIWGPTGIGKTTIARALFN 224
Score = 22.2 bits (45), Expect(2) = 0.19
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 550 EIMSKLAGES--ESNLRKAFEEADKNSPAIIFIDELD 654
+++SKL + E N A +E + +IFID+LD
Sbjct: 265 KLLSKLLDKKNLEINHLDAVKERLRQMKVLIFIDDLD 301
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANET 519
+KP R L+ GPPG+GK+ + +A++ +T
Sbjct: 169 IKPGRLTLLLGPPGSGKSTLLKALSGKT 196
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +1
Query: 370 LAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN--ETGAFFFLIN 543
L+ +KE + L ++ + G + I + GPPG GKT I R++A + F F +
Sbjct: 418 LSDVKERI---LEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALDRKFFRFSVG 474
Query: 544 GPEIMSKLAGESES-------NLRKAFEEADKNSPAIIFIDELDAI 660
G ++++ G ++ + + + +P I+F DE+D +
Sbjct: 475 GLSDVAEIKGHCQTYVGAMPGKMVQCLKSVGTANPLILF-DEIDKL 519
>At2g39730.3 68415.m04879 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 441
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 612
+K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA
Sbjct: 155 IKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 214
Query: 613 ---DKNSPAIIFIDELDA 657
K +FI++LDA
Sbjct: 215 DLIKKGKMCCLFINDLDA 232
>At2g39730.2 68415.m04878 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 446
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 612
+K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA
Sbjct: 155 IKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 214
Query: 613 ---DKNSPAIIFIDELDA 657
K +FI++LDA
Sbjct: 215 DLIKKGKMCCLFINDLDA 232
>At2g39730.1 68415.m04877 ribulose bisphosphate
carboxylase/oxygenase activase / RuBisCO activase
identical to SWISS-PROT:P10896 ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA)[Arabidopsis thaliana]
Length = 474
Score = 32.7 bits (71), Expect = 0.24
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 612
+K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA
Sbjct: 155 IKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 214
Query: 613 ---DKNSPAIIFIDELDA 657
K +FI++LDA
Sbjct: 215 DLIKKGKMCCLFINDLDA 232
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 574 ESESNLRKAFEEADKNSPAIIFIDELDA 657
ES NL KAF+ DK+S I IDEL++
Sbjct: 464 ESNENLYKAFQHFDKDSSGYITIDELES 491
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 32.3 bits (70), Expect = 0.32
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANET 519
I+ +GPPGTGKT IA+++ N +
Sbjct: 140 IVFWGPPGTGKTSIAKSLINSS 161
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 370 LAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFF 534
L+ +KE + L ++ + G + I + GPPG GKT I R++A FF
Sbjct: 435 LSDVKERI---LEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALNRKFF 486
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT IAR V N+ F L
Sbjct: 258 RIIGIWGPPGIGKTTIARVVYNQLSHSFQL 287
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANE 516
+L+YGPPGTGKT AVA +
Sbjct: 75 LLLYGPPGTGKTSTILAVARK 95
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
VKP R L+ GPP +GKT + +A+A +
Sbjct: 198 VKPSRMTLLLGPPSSGKTTLLQALAGK 224
>At5g38340.1 68418.m04627 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1059
Score = 31.5 bits (68), Expect = 0.56
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN-- 513
+DD+ G + ++K ++ L H + K IG+ +GP G GKT IAR + N
Sbjct: 228 FDDLIGMEAHMEKMKSLLSL---HSNEVKMIGI--------WGPSGIGKTTIARVLYNRF 276
Query: 514 --ETGAFFFLINGPEIM 558
+ G F+ N E+M
Sbjct: 277 SGDFGLSVFMDNIKELM 293
>At4g26090.1 68417.m03756 disease resistance protein RPS2
(CC-NBS-LRR class), putative domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.
identical to RPS2 (gi:13661831)
Length = 909
Score = 31.5 bits (68), Expect = 0.56
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 310 EEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL-MYGPPGTGK 486
E EA+ G CR+ IK +V + + + + RGI+ +YGP G GK
Sbjct: 131 ERSEAIKTDGGSIQVTCRE--IPIKSVVGNTTMMEQVLEFLSEEEERGIIGVYGPGGVGK 188
Query: 487 TLIARAVANE 516
T + +++ NE
Sbjct: 189 TTLMQSINNE 198
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
+KP R L+ GPP +GKT + +A+A +
Sbjct: 196 IKPSRMTLLLGPPSSGKTTLLQALAGK 222
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 30.7 bits (66), Expect = 0.97
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
V+P R L+ GPPG GKT + +A++ +
Sbjct: 164 VRPGRMTLLLGPPGCGKTTLLQALSGK 190
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 516
+DD+ G + ++K ++++ K IG+ +GPPG GKT IAR++ N+
Sbjct: 234 FDDLIGMGDHMEKMKPLLDIDSDE---MKTIGI--------WGPPGVGKTTIARSLYNQ 281
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 30.7 bits (66), Expect = 0.97
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
+KP R L+ GPPG+GK+ + A+A +
Sbjct: 183 IKPGRMTLLLGPPGSGKSTLLLALAGK 209
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 30.7 bits (66), Expect = 0.97
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
VKP R L+ GPP +GKT + A+A +
Sbjct: 192 VKPSRMTLLLGPPSSGKTTLLLALAGK 218
>At5g40060.1 68418.m04860 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein. False intron
created at intron 2 to escape a frameshift in the BAC
sequence.
Length = 1165
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 358 CRKQLAQIKEM-----VELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 507
C+ LA K+ +E+ L+ S + K R + ++GP G GKT IARA+
Sbjct: 171 CKLNLAPSKDFDDFVGLEVHLKDMSSLLCLDSKEVRMVGIWGPSGIGKTTIARAL 225
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVA 510
V+P R L+ GPPG GKT + +A++
Sbjct: 161 VRPGRMTLLLGPPGCGKTTLLQALS 185
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT IAR + N+ F L
Sbjct: 290 RIIGIWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT IAR + N+ F L
Sbjct: 290 RIIGIWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT IAR + N+ F L
Sbjct: 290 RIIGIWGPPGIGKTTIARFLLNQVSDRFQL 319
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT IAR + N+ F L
Sbjct: 294 RMIGIWGPPGIGKTTIARFLFNQVSDRFQL 323
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
+KP R L+ GPP +GKT + A+A +
Sbjct: 170 IKPSRMTLLLGPPSSGKTTLLLALAGK 196
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETG 522
++P R L+ GPP +GKT + A+A G
Sbjct: 158 IRPSRLTLLLGPPSSGKTTLLLALAGRLG 186
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETG 522
V+ +L+ GPPG GKT + R VA G
Sbjct: 194 VQDGNSLLLIGPPGVGKTTMIREVARMLG 222
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
VKP R L+ GPP +GKT + A+A +
Sbjct: 177 VKPGRMALLLGPPSSGKTTLLLALAGK 203
>At1g04730.1 68414.m00469 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 954
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +1
Query: 424 KAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE-SNLRKA 600
K G + +L+ G PG GKT +A A G IN + S A E+ ++ +
Sbjct: 338 KLTGPPEQKILLLCGAPGLGKTTLAHIAAKHCGYRVVEINASDERSASAIETRILDVVQM 397
Query: 601 FEEADKNSPAIIFIDELD 654
+ P + IDE+D
Sbjct: 398 NSVTADSRPKCLVIDEID 415
>At5g22010.1 68418.m02561 AAA-type ATPase family protein / BRCT
domain-containing protein contains Pfam profiles:
PF00533 BRCA1 C Terminus (BRCT) domain, PF00004 ATPase
family associated with various cellular activities (AAA)
Length = 956
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS 624
+ +L+ G PG GKT A+ V+ G +N S G++ SN+ K ++ NS
Sbjct: 394 KAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNA----SDSRGKANSNIAKGIGGSNANS 448
>At5g18350.1 68418.m02159 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1193
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I + GPPG GKT IARA+ ++ F L
Sbjct: 215 RMIGIVGPPGIGKTTIARALRDQISENFQL 244
>At2g14080.1 68415.m01566 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1215
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT I R + N+ + F L
Sbjct: 252 RMIGIWGPPGIGKTTIVRFLYNQLSSSFEL 281
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANE 516
+KP R L+ GPP +GKT + A+A +
Sbjct: 194 IKPGRMTLLLGPPSSGKTTLLLALAGK 220
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 13/93 (13%)
Frame = +1
Query: 457 LMYGPPGTGKTLIARAVA---NETGAFFFLINGPEIMS----------KLAGESESNLRK 597
++ G G GKT IA +A E A FL+ IMS K GE E+ +
Sbjct: 313 ILLGEAGVGKTAIAEGLAISIAEASAPGFLLT-KRIMSLDIGLLMAGAKERGELEARVTA 371
Query: 598 AFEEADKNSPAIIFIDELDAIAPKREKTHGEXG 696
E K+ I+FIDE+ + G G
Sbjct: 372 LISEVKKSGKVILFIDEVHTLIGSGTVGRGNKG 404
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 415 SLFKAIG--VKPPRGILMYGPPGTGKTLIARAVA 510
S+ K + ++P R L+ GPPG GKT + A++
Sbjct: 150 SILKGVSGIIRPKRMTLLLGPPGCGKTTLLLALS 183
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFFFL 537
R I ++GPPG GKT IAR + ++ F L
Sbjct: 224 RMIGIWGPPGIGKTTIARFLLSQVSKSFQL 253
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFFFL 537
+YGP G GKT IARA+ + + F L
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSFQL 240
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFFFL 537
++GP G GKT IARA+ N+ F L
Sbjct: 211 IWGPAGIGKTTIARALFNQLSTGFRL 236
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVA 510
+ P R L+ GPPG GKT + +A++
Sbjct: 162 ISPGRLTLLLGPPGCGKTTLLKALS 186
>At5g41540.1 68418.m05048 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1038
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFF 531
++GP G GKT IARA+ N+ F
Sbjct: 210 IWGPAGIGKTTIARALYNQLSTNF 233
>At5g01690.1 68418.m00086 cation/hydrogen exchanger, putative
(CHX27) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 732
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
Frame = +1
Query: 391 VELPLRHPSLFK-AIGVKPPRGILMYGPPGTGKTLIARAV----ANETGAFFFLINGPEI 555
VE PLR + F+ V+P ++ P G L AV N + + EI
Sbjct: 423 VEAPLRILTCFRNREAVRPVLDLVELSRPAIGSPLSVFAVNLEELNNHSLPLLIHHTQEI 482
Query: 556 MSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKR 672
L + KAF +K + + I+ A+AP++
Sbjct: 483 SPFLVPSRRDQIVKAFHNFEKTNQETVLIECFTAVAPRK 521
>At4g15570.1 68417.m02379 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 818
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +1
Query: 430 IGVKPPRGILMYGPPGTGKT----LIARAVANETGAFFFLINGPEIMSKLAGESESNLRK 597
+G+ +L+ GPPGTGKT I A+ + T A + ++ + +++
Sbjct: 268 VGLSRKSFVLIQGPPGTGKTQTILSILGAIMHATPA---RVQSKGTDHEVKRGIQMTIQE 324
Query: 598 AFEEADKNSPAIIFIDELDAIAPK 669
+ + SP I+ ++ DAI P+
Sbjct: 325 KYNHWGRASPWILGVNPRDAIMPE 348
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVA 510
+KP R L+ GPP GKT + +A++
Sbjct: 197 IKPGRLTLLLGPPSCGKTTLLKALS 221
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 391 VELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 510
++L + +K +G R L++G PG GKT + A+A
Sbjct: 181 IDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIA 220
>At1g73110.1 68414.m08453 ribulose bisphosphate
carboxylase/oxygenase activase, putative / RuBisCO
activase, putative similar to ribulose bisphosphate
carboxylase/oxygenase activase, chloroplast precursor
(RuBisCO activase, RA) [Oryza sativa] SWISS-PROT:P93431
Length = 432
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Frame = +1
Query: 418 LFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK 597
L ++ +K P + ++G G GKT + G +++ E+ S AGE +R
Sbjct: 155 LAPSLNIKIPLILGIWGGKGQGKTFQTELIFKTMGVEPVIMSAGELESDRAGEPGRLIRD 214
Query: 598 AFEEA-----DKNSPAIIFIDELDA 657
+ A ++ +++ I+++DA
Sbjct: 215 RYRTASQVIQNQGKMSVLMINDIDA 239
>At1g66090.1 68414.m07501 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 429
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +1
Query: 310 EEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKT 489
E+ A + +D++ G + L +I+ ++ L K +G+ GP G GK+
Sbjct: 186 EKLNATESKDFDEMVGIKAHLTKIESLLSLDY---DKVKIVGIS--------GPAGIGKS 234
Query: 490 LIARAVANETGAFFFL 537
IARA+ N + F L
Sbjct: 235 TIARALHNLLSSSFHL 250
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 574 ESESNLRKAFEEADKNSPAIIFIDELDA 657
ES N+ KAF+ DK+ I DEL+A
Sbjct: 446 ESNENVYKAFQHFDKDGSGYITTDELEA 473
>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1556
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +1
Query: 286 DGEPIKREEEEEALNAVGYDDIGGCRKQ---LAQIKEMVELPLRHPSLFKAIGVKPPRGI 456
D E I RE+ ++ ++ V + R + +A +E P++ L K + GI
Sbjct: 327 DNEGINREKVDDMIDLVVKKVVAAVRNRPEIVADYTVGLESPIK--DLMKLFNTESSSGI 384
Query: 457 L---MYGPPGTGKTLIARAVANE 516
+YG G GKT +A+A N+
Sbjct: 385 QVMGLYGMGGIGKTTLAKAFYNK 407
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 340 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMY 465
+ D KQ Q E++ +RHP L +G P RG L+Y
Sbjct: 459 HSDKSSLTKQFHQELEILS-KIRHPHLLLLLGACPERGSLVY 499
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +1
Query: 283 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILM 462
C + +E + + Y + G +L +I++M+ + P + +G+
Sbjct: 120 CSDSQLVKETVRDVYEKLFYMERIGIYSKLLEIEKMIN---KQPLDIRCVGI-------- 168
Query: 463 YGPPGTGKTLIARAVANETGAFF 531
+G PG GKT +A+AV ++ F
Sbjct: 169 WGMPGIGKTTLAKAVFDQMSGEF 191
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +1
Query: 283 CDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILM 462
C + +E + + Y + G +L +I++M+ + P + +G+
Sbjct: 120 CSDSQLVKETVRDVYEKLFYMERIGIYSKLLEIEKMIN---KQPLDIRCVGI-------- 168
Query: 463 YGPPGTGKTLIARAVANETGAFF 531
+G PG GKT +A+AV ++ F
Sbjct: 169 WGMPGIGKTTLAKAVFDQMSGEF 191
>At5g41750.2 68418.m05081 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFF 531
++GP G GKT IAR + N+ + F
Sbjct: 212 IWGPAGIGKTTIARTLFNKISSIF 235
>At5g41750.1 68418.m05080 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1068
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFF 531
++GP G GKT IAR + N+ + F
Sbjct: 212 IWGPAGIGKTTIARTLFNKISSIF 235
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFFFL 537
++GP G GK+ IARA+ N+ + F L
Sbjct: 212 IWGPAGIGKSTIARALYNQLSSSFQL 237
>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1008
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 415 SLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFF 531
SL + K R ++GP G GKT IARA+ + F
Sbjct: 195 SLMLCLECKQVRMFGIWGPSGIGKTTIARALFSRISRHF 233
>At4g28070.1 68417.m04026 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 464
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLI 495
V P +G+ +YG GTGKT++
Sbjct: 130 VSPVKGLYLYGGVGTGKTML 149
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANE 516
++GP G GKT IARA+ N+
Sbjct: 210 IWGPAGVGKTTIARALYNQ 228
>At3g05790.1 68416.m00650 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 942
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = +1
Query: 433 GVKPPRGILMYGPPGTGKTLIARAVAN--ETGAFFFLINGPEIMSKLAGESES------- 585
G + I + GP G GKT I R++A + F F + G ++++ G +
Sbjct: 445 GTSQGKIICLSGPTGVGKTSIGRSIARALDRKFFRFSVGGLSDVAEIKGHRRTYIGAMPG 504
Query: 586 NLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGE 690
+ + + +P ++ IDE+D + + HG+
Sbjct: 505 KMVQCLKNVGTENP-LVLIDEIDKLGVRGH--HGD 536
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 454 ILMYGPPGTGKTLIARAVANE 516
+++ GPPGTGKT A+A+E
Sbjct: 51 LILSGPPGTGKTTSILALAHE 71
>At1g05990.1 68414.m00627 calcium-binding protein, putative strong
similarity to calcium-binding protein [Lotus japonicus]
GI:18413495; contains INTERPRO:IPR002048 calcium-binding
EF-hand domain
Length = 150
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 574 ESESNLRKAFEEADKNSPAIIFIDELDAI 660
E E ++++AF D+N I +DEL A+
Sbjct: 75 EEEEDMKEAFNVFDQNGDGFITVDELKAV 103
>At5g45200.1 68418.m05548 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1261
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 355 GCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFF 531
G ++ Q+KE +EL + + F IGV G PG GKT +A+ + +E G F
Sbjct: 217 GIETRVEQLKEKLELKSENVTRF--IGV--------VGMPGIGKTTLAKRLFSECGKHF 265
>At5g35970.1 68418.m04332 DNA-binding protein, putative similar to
SWISS-PROT:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2, SMUBP-2)
[Mesocricetus auratus]
Length = 961
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 427 AIGVKPPRGILMY-GPPGTGKTLIARAV 507
A+GV R +++ GPPGTGKT + + V
Sbjct: 496 ALGVNKKRPVMIVQGPPGTGKTGMLKEV 523
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVAN 513
R I ++G PG GKT +A+AV N
Sbjct: 190 RSIGIWGMPGIGKTTLAKAVFN 211
>At4g27420.1 68417.m03941 ABC transporter family protein
D.melanogaster P element CaSpeR-1 gene (white
protein),PID:g870996
Length = 639
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVANETG 522
VKP + M GP G+GKT + A+ G
Sbjct: 75 VKPGEILAMLGPSGSGKTSLLTALGGRVG 103
>At3g25620.1 68416.m03189 ABC transporter family protein similar to
GB:AAC61893 from [Bactrocera tryoni] (Insect Mol. Biol.
6 (4), 343-356 (1997))
Length = 467
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 436 VKPPRGILMYGPPGTGKTLIARAVA 510
VKP + M GP G+GKT + A+A
Sbjct: 107 VKPGELLAMLGPSGSGKTTLVTALA 131
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 27.9 bits (59), Expect = 6.8
Identities = 28/72 (38%), Positives = 36/72 (50%)
Frame = +1
Query: 292 EPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 471
E I R+ E+ LN D G A +KEM E+ L F GVK + ++GP
Sbjct: 164 EKIARDVSEK-LNMTPSSDFDGMVGIEAHLKEM-EVLLD----FDYDGVKI---VGIFGP 214
Query: 472 PGTGKTLIARAV 507
G GKT IARA+
Sbjct: 215 AGIGKTTIARAL 226
>At1g61950.1 68414.m06988 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase GI:3283996 from [Nicotiana tabacum]; contains
protein kinase domain, Pfam:PF00069; contains EF hand
domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 551
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 484 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELD 654
K L+ A + G ++ M++ E E NL KAF+ DK++ I EL+
Sbjct: 442 KQLLEDADVDGNGTIDYIEFISATMNRFRVEREDNLFKAFQHFDKDNSGFISRQELE 498
>At1g13280.1 68414.m01542 allene oxide cyclase family protein
similar to ERD12 [GI:15320414], allene oxide cyclase
GI:8977961 from [Lycopersicon esculentum]; contains Pfam
profile PF06351: Allene oxide cyclase
Length = 254
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 481 GKTLIARAVANETGAFFFLI--NGPEIMSKLAGESESNLRKAFEEADKNSPAII 636
G + AR+ + TG FF I + S+ E N+ + F E D+NSPA++
Sbjct: 48 GLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYE-FNEGDRNSPAVL 100
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 415 SLFKAIGVKPPRGILMYGPPGTGKTL 492
S+ +G K +++GPPGTGKT+
Sbjct: 404 SIEMVLGCKGAPPYVIHGPPGTGKTM 429
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 457 LMYGPPGTGKTLIARAV 507
L+ GPPGTGKT+ + A+
Sbjct: 507 LIQGPPGTGKTVTSAAI 523
>At5g18370.1 68418.m02161 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1210
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAVANETGAFF 531
R I + GPPG GKT IAR + ++ F
Sbjct: 256 RMIGILGPPGIGKTTIARVLYDQISEKF 283
>At5g18360.1 68418.m02160 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 900
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAVANETGAFF 531
++GP G GKT IARA+ N F
Sbjct: 212 IWGPAGIGKTTIARALFNRLSENF 235
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 439 KPPRGILMYGPPGTGKTLIARAVANE 516
+P L GP G GKT +A+A+A +
Sbjct: 562 QPSGSFLFLGPTGVGKTELAKALAEQ 587
>At3g21080.1 68416.m02665 ABC transporter-related contains 4
transmembrane domains; supported by tandem duplication
of ABC transporter family protein (GI:20260310)
(TIGR_Ath1:At3g21090) [Arabidopsis thaliana]
Length = 255
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 221 SKWSKQIHHHFASWLLIP*YTVTVNRLNVRK-KRKH*MLSAMMTSAVVANNWRKLRRW 391
S +S Q ++F +W + V L++++ K H L ++ T+ A W +L RW
Sbjct: 19 SLYSNQ-DNYFNNWSSLTQSEEVVEELSIQQTKYDHRSLPSLRTAEAEAAEWNELERW 75
>At3g20200.1 68416.m02560 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 780
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 322 ALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMY 465
A+ A+ D + G R Q + E++ +RHP + IG P G+L+Y
Sbjct: 478 AIKALKADAVQG-RSQFQREVEVLSC-IRHPHMVLLIGACPEYGVLVY 523
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 448 RGILMYGPPGTGKTLIARAV 507
R I ++GPPG GKT IAR +
Sbjct: 262 RMIGIWGPPGIGKTSIARVL 281
>At2g41860.2 68415.m05174 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 530
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 577 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGE 690
++ +L+KAF DKN I I+EL DA+A + T E
Sbjct: 428 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEE 466
>At2g41860.1 68415.m05173 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 7 [Arabidopsis thaliana]
gi|1399277|gb|AAB03247
Length = 425
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 577 SESNLRKAFEEADKNSPAIIFIDEL-DAIAPKREKTHGE 690
++ +L+KAF DKN I I+EL DA+A + T E
Sbjct: 323 NDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEE 361
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 439 KPPRGILMYGPPGTGKTLIARAVANE 516
+P L GP G GKT +A+A+A +
Sbjct: 597 QPTGSFLFLGPTGVGKTELAKALAEQ 622
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 27.5 bits (58), Expect = 9.0
Identities = 26/112 (23%), Positives = 44/112 (39%)
Frame = +1
Query: 88 IDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAP 267
+ D +GL L ++ P F++++ P +RD+ R +EF T +
Sbjct: 243 LPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEKFRIPKFKIEFGFSVTSVLDRLGLRS 302
Query: 268 DTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLF 423
++ H I E E A A D GC + + ++ HP LF
Sbjct: 303 MSMYHKACVEIDEEGAEAA--AATADGDCGCSLDFVEPPKKIDFVADHPFLF 352
>At1g63740.1 68414.m07213 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 992
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 460 MYGPPGTGKTLIARAV 507
+YGP G GKT IARA+
Sbjct: 171 IYGPAGIGKTTIARAL 186
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,645,174
Number of Sequences: 28952
Number of extensions: 327540
Number of successful extensions: 1447
Number of sequences better than 10.0: 182
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1413
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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