Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0724
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 404 e-113
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 398 e-111
SB_56| Best HMM Match : Actin (HMM E-Value=0) 398 e-111
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 396 e-111
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 353 1e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 211 4e-55
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_54| Best HMM Match : Actin (HMM E-Value=0) 168 4e-42
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 151 4e-37
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 136 2e-32
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 3e-23
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 5e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 54 1e-07
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.001
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 35 0.073
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.096
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.29
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.51
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.68
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.2
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.2
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 31 1.2
SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.6
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.1
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 29 2.7
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 2.7
SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2) 29 2.7
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 3.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84) 29 3.6
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 4.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.8
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 29 4.8
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 4.8
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.8
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 29 4.8
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.8
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 6.3
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 6.3
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 6.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_25841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 8.4
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 8.4
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 28 8.4
SB_43523| Best HMM Match : GRP (HMM E-Value=0.013) 28 8.4
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 8.4
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.4
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_15021| Best HMM Match : Zona_pellucida (HMM E-Value=0) 28 8.4
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 8.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 404 bits (994), Expect = e-113
Identities = 186/192 (96%), Positives = 192/192 (100%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 615
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 616 LAGRDLTDYLME 651
LAGRDLTDYLM+
Sbjct: 181 LAGRDLTDYLMK 192
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 653 ILTERGYSFTTT 688
ILTERGYSFTTT
Sbjct: 193 ILTERGYSFTTT 204
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 398 bits (981), Expect = e-111
Identities = 184/192 (95%), Positives = 191/192 (99%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 615
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 616 LAGRDLTDYLME 651
LAGRDLTDYLM+
Sbjct: 181 LAGRDLTDYLMK 192
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 653 ILTERGYSFTTT 688
ILTERGYSFTTT
Sbjct: 193 ILTERGYSFTTT 204
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 398 bits (979), Expect = e-111
Identities = 184/190 (96%), Positives = 190/190 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 261
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 441
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 442 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 621
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 622 GRDLTDYLME 651
GRDLTDYLM+
Sbjct: 182 GRDLTDYLMK 191
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 653 ILTERGYSFTTT 688
ILTERGYSFTTT
Sbjct: 192 ILTERGYSFTTT 203
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 396 bits (976), Expect = e-111
Identities = 183/190 (96%), Positives = 190/190 (100%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 261
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 441
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 442 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 621
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 622 GRDLTDYLME 651
GRDLTDYLM+
Sbjct: 182 GRDLTDYLMK 191
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 653 ILTERGYSFTTT 688
ILTERGYSFTTT
Sbjct: 192 ILTERGYSFTTT 203
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 353 bits (867), Expect = 1e-97
Identities = 163/173 (94%), Positives = 170/173 (98%), Gaps = 2/173 (1%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE--GYA 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 211 bits (516), Expect = 4e-55
Identities = 97/189 (51%), Positives = 133/189 (70%), Gaps = 3/189 (1%)
Frame = +1
Query: 94 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 267
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 268 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 444
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 445 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 624
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 625 RDLTDYLME 651
RD+T YL++
Sbjct: 187 RDITKYLIK 195
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 261
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 348
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 144 bits (350), Expect = 5e-35
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = +1
Query: 421 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 600
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 601 ILRLDLAGRDLTDYLME 651
I+RLDLAGRDLTDYLM+
Sbjct: 138 IIRLDLAGRDLTDYLMK 154
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 653 ILTERGYSFTTT 688
ILTERGYSFTTT
Sbjct: 155 ILTERGYSFTTT 166
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 168 bits (408), Expect = 4e-42
Identities = 76/106 (71%), Positives = 89/106 (83%)
Frame = +1
Query: 328 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 508 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 645
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYL 2234
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 201
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 151 bits (367), Expect = 4e-37
Identities = 63/90 (70%), Positives = 83/90 (92%)
Frame = +1
Query: 376 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 555
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 556 SHTVPIYEGYALPHAILRLDLAGRDLTDYL 645
SH+VPIYEG+A+PH+I+R D+AGRD++ YL
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYL 215
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 136 bits (329), Expect = 2e-32
Identities = 63/70 (90%), Positives = 67/70 (95%)
Frame = +1
Query: 442 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 621
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 622 GRDLTDYLME 651
GRDLTDYLM+
Sbjct: 61 GRDLTDYLMK 70
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 3e-23
Identities = 46/117 (39%), Positives = 77/117 (65%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 465
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 466 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 636
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 201
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.4 bits (135), Expect = 5e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +1
Query: 88 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 267
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 268 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 441
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 442 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 603
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 604 LR 609
R
Sbjct: 384 RR 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +1
Query: 70 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 240
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 241 GDEAQSKRGILTL 279
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 487 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLME 651
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQ 821
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 214 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 393
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 523 TGIVLDSGDGVSHTVPI 573
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 454 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 630
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 631 LTDYLME 651
+T ++ +
Sbjct: 98 ITFFVQQ 104
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 331 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 510
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 511 SGRTTGIV 534
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 467 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS--CVWTWPVVTS 634
P TSP + P +R P+ PP C + V PTP S++ + SP+PS C ++ +TS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPSTFCHYSTEKITS 374
Query: 635 QTT 643
T
Sbjct: 375 SRT 377
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2
Query: 198 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 82
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 34.7 bits (76), Expect = 0.073
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +2
Query: 455 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTWPV 625
H RPP S P +R T P P + PAT +PT +T T +PT T P
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPTKPTTTTPPA 85
Query: 626 VTSQTT 643
T+ TT
Sbjct: 86 TTTPTT 91
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +2
Query: 458 STRPPC-TSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWTW 619
+T PP T+P+KP + T P + PAT +PT +T T +PT T
Sbjct: 52 TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTP 111
Query: 620 PVVTSQT 640
P T+ T
Sbjct: 112 PATTTPT 118
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 458 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQ 637
+T P T+P+KP + PP + TP + T P+T +PT S T P T+
Sbjct: 137 TTPPATTTPTKPTT-----TTPPATT-TPTKPTTTTPPATT---TPTKSTTTTPPATTTP 187
Query: 638 TTSWXIL--TERGYS 676
TT +L + R YS
Sbjct: 188 TTRPLLLLCSRRTYS 202
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 604
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 446 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTRDTHSPTPSC 607
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRPVVPPVSC 535
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 455 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 568
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 470 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 568
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQTT 643
P SP+ P P P + TP T +PT T+ T + TP+ P + TT
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTT 114
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +2
Query: 461 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQT 640
T P T+PS T P + TP +PTP ST +P + T P T+ T
Sbjct: 52 TTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHT 111
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 461 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 604
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPSCVWTWPVVTSQTT 643
P +P+KP P + TP T SPT P +T +PTP+ P + TT
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTT--PTPKTPTPTT 88
Query: 644 S 646
S
Sbjct: 89 S 89
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +2
Query: 461 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TRDTHSPTPSCVWTWP 622
T+P P T+P+ KP P P + TP +P TP P+ T H+PT T+
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPTTFI 151
Query: 623 VVTS 634
++ S
Sbjct: 152 LLLS 155
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 461 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTPS 604
T+P T+P+ T P S P +PTP P+T +PTP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +2
Query: 458 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTRDTHSPTPSCVWTWPVV 628
ST P T+P+ T P + TP +P TP P+T PTP+ T P
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA---TTPTP 102
Query: 629 TSQT 640
T T
Sbjct: 103 TKPT 106
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 458 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT 598
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 479 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPT-PSCVWTWPVVTSQTT 643
+P+KP P P S TP + +PT T T SPT P+ P + TT
Sbjct: 25 TPTKPTPTTHTPTKP--SPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTT 78
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 33.5 bits (73), Expect = 0.17
Identities = 26/90 (28%), Positives = 33/90 (36%)
Frame = +3
Query: 399 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 578
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 579 GIRTPPRHPASGLGRS*PHRLPHGXSSPSA 668
T P HP R+ P PHG S +A
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PHGLSKHTA 404
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +3
Query: 411 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 590
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 591 PPRHP 605
P HP
Sbjct: 248 APDHP 252
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +3
Query: 417 GQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI--RT 590
G + PDH + R P V R+ + GL +R P H G+ RT
Sbjct: 302 GLSKRTAPDHTLGL----FKRTGPDHTHGVSKRTAPDHPLGLSKRTAPD--HTLGVSKRT 355
Query: 591 PPRHPASGLGRS*PHRLPHGXSSPSA 668
P HP R+ PH P G S +A
Sbjct: 356 APDHPHGLSKRTAPHH-PLGLSKSTA 380
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 455 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 604
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +2
Query: 446 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTRDTHSPTPS 604
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 452 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSP--TPS 604
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 449 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 604
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 476 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTP 601
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 476 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 622
T+P+ P + T P P + TP T + TP +P P+ P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAP 178
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +2
Query: 470 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 595
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 446 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 568
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 470 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 568
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = +2
Query: 464 RPPCTSPSKPCSRCTRPVVPPVSCWTPAT---VSPTPCPSTRDTHSPTPSCVWTWPVVTS 634
+PP T+PSK T P+ P++ TP T +PT +T T + + + T
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATASTQTAAEANTFLSTQKTD 438
Query: 635 QTTSWXILTERGYSFTTT 688
TTS T TT
Sbjct: 439 ATTSQSTSTTEATKSQTT 456
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 429
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.68
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 418 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 534
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 623 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 444
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 443 IWVIFSLLALGLR 405
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 623 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 486
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 623 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 486
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +2
Query: 458 STRPPCTSPSKPCSRCTRP----VVPPVSCWTPA--TVSPTPCPSTRDTHSPTPSCVWTW 619
+T P T+ + P + T P P + TP T +PT +T +T + TP+ T
Sbjct: 142 TTTTPNTTTTSPNATTTTPNTTTTTPNTTTTTPTATTTTPTATTTTPNTTTNTPNATTTT 201
Query: 620 PVVTSQTTSWXILTERGYSFTTTGRA 697
P T+ TT+ T + TTT A
Sbjct: 202 P--TATTTTPNATTTTPNTTTTTPNA 225
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 458 STRPPCTSPSKPCSRCTRPVV----PPVSCWTP--ATVSPTPCPSTRDTHSPTPSCVWTW 619
+T P T+ + P + T P P + TP T +PT +T + + TP+ T
Sbjct: 163 TTTTPNTTTTTPTATTTTPTATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTTTT 222
Query: 620 PVVTSQTTSWXILTERGYSFTTTG 691
P T+ TT ++ ++ +TG
Sbjct: 223 PNATT-TTPTATTMQQSFNRVSTG 245
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 455 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 601
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 563 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 411
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 410 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 246
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 446 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPV 625
C+ T P +P+ + T P + +TP T S TP PS T S TP+ +T
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTT-SYTPTPSYTPTTSYTPTPSYTSTT 96
Query: 626 VTSQTTSWXILT 661
+ TTS+ T
Sbjct: 97 SYTPTTSYTSTT 108
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 458 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT--WPVVT 631
S P + P T P S + + +PTP + +++PTPS T + T
Sbjct: 79 SYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTSTTSYTPTT 138
Query: 632 SQTTSWXILTERGYSFTTT 688
S T + + Y+ TT+
Sbjct: 139 SYTPTPSYTSTTSYTSTTS 157
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 461 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQT 640
T P +P+ S P P + +T T S TP PS T S TP+ +T + T
Sbjct: 15 TSTPSYTPTT--SYTPTPSYTPTTSYT-CTTSYTPTPSYTPTPSYTPTTSYTPTTSYTPT 71
Query: 641 TSW 649
TS+
Sbjct: 72 TSY 74
>SB_11157| Best HMM Match : NUC173 (HMM E-Value=9.2e-39)
Length = 1060
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +2
Query: 446 CSKHSTRPPCTSP---SKPCSRCTRPVVPP-VSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
C+ H T P TS S P + T + P +C T T C H TP
Sbjct: 743 CTHHLTTPETTSTHHISAPQTTSTHHITTPQTTCTHHLTTPETTCTH----HISTPQTTG 798
Query: 614 TWPVVTSQTTSWXILT 661
T + T QTTS +T
Sbjct: 799 THHITTPQTTSTHHIT 814
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 455 HSTRPPCTSP---SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPV 625
H T P TS S P + T + P T +T T +T H TP T+ +
Sbjct: 966 HITTPQTTSTYHISTPQTTSTHHITTPQ---TTSTYHITTPQTTSTHHITTPQTTSTYHI 1022
Query: 626 VTSQTTSWXILT 661
T QTTS +T
Sbjct: 1023 TTPQTTSTHHIT 1034
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 402 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 494
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 482 PSKPCSRCTRPVVPP 526
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 470 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 568
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 470 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 574
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +2
Query: 452 KHSTRPPCTSPSKPCSRC----TRPVVPPVSCWTPATVSPTPCPSTRDTHSPT-PSCVWT 616
+H + PP T PS P + T+P PP + P S P PS ++ PT PS T
Sbjct: 505 QHPSYPP-TQPSYPPTPSSYLPTQPYYPPPQPYPPTQPSYPPTPS---SYPPTQPSYPPT 560
Query: 617 WPVVTSQTT 643
P +++ TT
Sbjct: 561 APFLSADTT 569
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +2
Query: 470 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQTTS 646
P ++P P + VV V+ +V+P PST T P+ T SQT+S
Sbjct: 164 PSSTPEMPETAKPTTVVTQVTTMPNTSVTPLTSPSTSVTQRTRPTTPVTQEATPSQTSS 222
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 601
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2)
Length = 120
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +2
Query: 452 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVT 631
K R P T K C R TR + TP+T S T TR +PT + V T P T
Sbjct: 19 KVQKRGPYTRDDK-CPRNTRTAKSHTTT-TPSTSSGTTSKPTRVPSNPTMAKVITKPRTT 76
Query: 632 SQT 640
S T
Sbjct: 77 SST 79
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 476 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 580
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 381 PRPAY*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 527
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 503 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 604
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 551 VSPTPCPSTRDTHSPTPSCVWTWPVVT 631
VS TP + + H PTP C +PV T
Sbjct: 10 VSSTPSQMSAERHEPTPQCRLKFPVQT 36
>SB_15222| Best HMM Match : Glycoprotein_G (HMM E-Value=0.84)
Length = 244
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 509 RPVVPPVSCWTPATVS---PTPCPSTRDTHSPT--PSCVWTWPVVTSQTTS 646
+P PPV+ P T S PT P+T T PT P+ + T T TT+
Sbjct: 151 QPTEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTTA 201
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +2
Query: 461 TRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQ 637
T PP T+P P P + T T PT P+T T PT + P
Sbjct: 153 TEPPVTTPVPTTESTAVPTTAPTTEPTTVPTTIPTTIPTTVPTTEPTTAPTTPEPTTLEP 212
Query: 638 T 640
T
Sbjct: 213 T 213
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 441 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 587
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 406 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 534
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 613
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 584 THSPTPSCVWTWPVVTSQTTSWXILTERGYSFTTTG 691
T T + WTW + S T G +FTT G
Sbjct: 332 TQDSTDTFDWTWDIANSPLTDHTTTVTSGSTFTTAG 367
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 506 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWP 622
T VVPP+ P V P+P + SPTPSC+ P
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCIEQQP 240
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 479 SPSKPCSRCTRPVVPPVSCWTPATVS--PTPCPSTRDTHSPTPSCVWTWPVVTSQTTS 646
SPS T P P + TPAT+ TP P T T PT + T T TTS
Sbjct: 902 SPSTTTKSVTTPQTSPKTPQTPATLPTTQTPEPGTEKT-MPTTATPGTGQPTTPLTTS 958
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 482 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPV 625
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 452 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 601
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/90 (26%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
Frame = +3
Query: 399 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 578
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 579 GIRTPPRHPA-SGLGRS*PHRLPHGXSSPS 665
P RHP+ S G R H SSPS
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSPS 171
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 479 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 601
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 557 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 384
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 383 G 381
G
Sbjct: 147 G 147
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 435 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 602
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +2
Query: 476 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 616
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 464 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 601
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 173 GNTARGASSPAKPALHIPEPLSTT 102
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 452 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 604
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 515 VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQTTS 646
V +S +P T + P + +T P+PS T P T+ T S
Sbjct: 4 VTSTLSAGSPVTAPSSTRPPSPNTRPPSPSTTATLPSATNSTQS 47
>SB_59554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1247
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -2
Query: 690 PVVVNE*PRSVRXFHEVVCEVTTGQVQTQ---DGVGECVSLVDGHGVGDTVAGVQHDTGG 520
P++ N+ P+SV+ + V E G+ Q DG+ + V+ GHG G+ +A +H+
Sbjct: 432 PIIENDIPQSVQKYQLAVQEAKPGEKLAQLFPDGL-KPVTDPSGHG-GERLAERRHN--- 486
Query: 519 TTGRVQREHGL--DGDVHG 469
GR +R +G GD G
Sbjct: 487 --GRDRRRYGQPDSGDASG 503
>SB_25841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -1
Query: 265 LFCSVPHLLHKSPSVPYR---PSRPDGGAFPRSRETLREEHHLLRSRPCTYRS 116
LF + P L SVP P+R + G P S LR + LLR + TY +
Sbjct: 213 LFSAQPESLGPVVSVPEANAVPARVETGGTPASSPNLRVDQILLRLKMLTYNT 265
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 565
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 405 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI 584
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 585 RT 590
+T
Sbjct: 707 QT 708
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +2
Query: 467 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQT 640
PP T+P P P + T AT PT P+T T PT + P T
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPTTAPTTPEPTTLEPT 59
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/65 (38%), Positives = 28/65 (43%)
Frame = +2
Query: 449 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVV 628
S S PP ++PS T PPVS TP+ P PS S TPS T PV
Sbjct: 376 STPSNTPPVSTPSHTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVS-TPS--HTPPVS 430
Query: 629 TSQTT 643
T T
Sbjct: 431 TPSNT 435
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/65 (38%), Positives = 28/65 (43%)
Frame = +2
Query: 449 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVV 628
S S PP ++PS T PPVS TP+ P PS S TPS T PV
Sbjct: 430 STPSNTPPVSTPSHTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVS-TPS--HTPPVS 484
Query: 629 TSQTT 643
T T
Sbjct: 485 TPSNT 489
>SB_43523| Best HMM Match : GRP (HMM E-Value=0.013)
Length = 446
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 642 VVCEVTTGQVQTQDGVGECVSLVDGHGVGDTVAGVQHDTGGTT 514
+V +T G+ DG G DG GVG G HD GG T
Sbjct: 250 LVVVMTGGETGHDDGDGSGHDDGDGSGVGFRNDGDGHDGGGET 292
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 521 PPVSCWTPATVSPTPCPSTRDTHSPTPSCVWTWPVVTSQTT 643
PP++ T + S TP +T + + + + T P +T+QTT
Sbjct: 683 PPIASTTDTSTSQTPPIATTPSLTTQTTLIATTPSLTTQTT 723
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 456 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTP 593
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 488 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSC 607
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 250 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 80
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_15021| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 751
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 503 CTRPVVPPVSCWTPATVSPTPCPS-TRDTHSPTPSCVWTWPVVTSQTTSWXILTERGYSF 679
CT +PP + P T +P P + T+ PT + + V + T+ T +
Sbjct: 175 CTDTDIPPPTLPPPPTTTPPPTTTQATTTNPPTTTSTASSTTVRATTSGEVSSTSSPGAD 234
Query: 680 TTTGRAG 700
T+TG G
Sbjct: 235 TSTGHPG 241
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -2
Query: 621 GQVQTQDGVGECVS--LVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGGRVEC 454
G+V GVG+ + + D GVGD G D GG DG V V C
Sbjct: 170 GRVSDYGGVGDDANGRVSDDGGVGDNAEGRVSDDGGVGDNADGRVSDDGGVGDDDVVC 227
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,435,511
Number of Sequences: 59808
Number of extensions: 665289
Number of successful extensions: 2912
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 2257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2834
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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