Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0722
         (600 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0D185 Cluster: Chromosome undetermined scaffold_34, wh...    33   3.9  

>UniRef50_A0D185 Cluster: Chromosome undetermined scaffold_34, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_34,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1492

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -3

Query: 520 IFQMTSFITVDTSPN-HFRWIHCSVLLTFTLLISTVFCSNKNLYKFDNEFIIF-KTIT*L 347
           +F +++    D S N    W    +++ F  +IS +F  N N+Y FDN  ++  + IT  
Sbjct: 9   LFYLSAIADHDRSDNLRSSWNKIKIIIYFIQVISLLFIDNINIY-FDNYILVLARFITFQ 67

Query: 346 SIIESYY 326
            I  SYY
Sbjct: 68  QIQNSYY 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,656,414
Number of Sequences: 1657284
Number of extensions: 7626476
Number of successful extensions: 12230
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 11994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12228
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)