Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0719
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 190 6e-49
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 190 8e-49
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 188 3e-48
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 185 2e-47
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 175 2e-44
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 162 3e-40
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 161 5e-40
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 156 2e-38
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 153 1e-37
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 149 1e-36
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 149 1e-36
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 149 1e-36
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 148 3e-36
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 146 2e-35
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 145 3e-35
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 130 1e-30
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 126 1e-29
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 116 1e-26
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 97 8e-21
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 96 3e-20
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 80 1e-15
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 79 2e-15
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 79 4e-15
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 64 1e-10
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 64 1e-10
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 64 1e-10
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 59 3e-09
At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase cyc... 51 7e-07
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 46 3e-05
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 42 3e-04
At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5) i... 29 3.3
At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5) i... 29 3.3
At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,... 29 4.4
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 28 5.8
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 190 bits (464), Expect = 6e-49
Identities = 102/182 (56%), Positives = 123/182 (67%), Gaps = 7/182 (3%)
Frame = +2
Query: 110 TKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 289
+ + L++ +L + LG L I + KS E K ++THKV FD++I G IV+GLFGKT
Sbjct: 3 SSVTLLLWSLLL-LGTLSAIQAKKSKENLK--EITHKVYFDVEIDGKAAGRIVMGLFGKT 59
Query: 290 VPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 448
VPKT ENF L +G G YKGS FHR+I +FM+Q SIYGE
Sbjct: 60 VPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGE 119
Query: 449 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 628
+F DENFKLKH G G+LSMANAG+DTNGSQFFITTV T WLDGRHVVFGKV+ GMDVV K
Sbjct: 120 KFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYK 179
Query: 629 IE 634
+E
Sbjct: 180 VE 181
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 190 bits (463), Expect = 8e-49
Identities = 94/164 (57%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
Frame = +2
Query: 206 KVTHKVSFDMKIGDDN---IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVI 376
K+THKV FD+ +G+ G IVIGL+G VP+T ENF L +G GYKGS FHRVI
Sbjct: 87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 556
++FMIQ +S+YG F+DENFKL H G G LSMANAG +TNGSQFFI T+
Sbjct: 147 RDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTI 206
Query: 557 KTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
KT WLDGRHVVFG+V+EGM+VV+ IE T DRP K V I+D
Sbjct: 207 KTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIAD 250
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 188 bits (458), Expect = 3e-48
Identities = 102/182 (56%), Positives = 121/182 (66%), Gaps = 7/182 (3%)
Frame = +2
Query: 167 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 346
IAS ++ E K +VTHKV FD++I + G +VIGLFGK VPKT ENF L +G G
Sbjct: 18 IASIQAKEDLK--EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVG 75
Query: 347 -------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSM 505
YKGSKFHR+I +FMIQ SIYG++F DENFKLKH G G LSM
Sbjct: 76 KSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSM 135
Query: 506 ANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXIS 685
AN+G+DTNGSQFFITTV T WLDGRHVVFGKV++GMDVV KIE + P V I+
Sbjct: 136 ANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGK-QSGTPKSKVVIA 194
Query: 686 DT 691
D+
Sbjct: 195 DS 196
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 185 bits (451), Expect = 2e-47
Identities = 94/172 (54%), Positives = 115/172 (66%)
Frame = +2
Query: 167 IASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG 346
+A+ + + I KVT+KV FD++IG + G IV+GLFG+ VPKT ENF L + G
Sbjct: 79 MAAEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG 138
Query: 347 YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDT 526
YKGS FHR+IK+FMIQ SIYG +FEDENF LKH G G LSMANAG +T
Sbjct: 139 YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNT 198
Query: 527 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXI 682
NGSQFFI TVKT WLD +HVVFG+V+EGM +V+ +E T A D P K I
Sbjct: 199 NGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRI 250
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 175 bits (427), Expect = 2e-44
Identities = 91/164 (55%), Positives = 109/164 (66%), Gaps = 8/164 (4%)
Frame = +2
Query: 167 IASAKSDEIPKGPK-VTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGE 343
I AK +++ + + VTHKV FD++I G I+IGLFG VPKT ENF L +G
Sbjct: 42 ILDAKLNQVGEDLEGVTHKVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGV 101
Query: 344 G-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLS 502
G +KGS FHR+I FMIQ SIYG++F DENFKLKH G G+LS
Sbjct: 102 GNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLS 161
Query: 503 MANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 634
MAN+G D+NGSQFFITTV T WLDG HVVFGKVL GM+VV+KIE
Sbjct: 162 MANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIE 205
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 162 bits (393), Expect = 3e-40
Identities = 87/164 (53%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 376
KV FDM IG G IV+ L+ PKT ENF L +G G +KGS FHRVI
Sbjct: 6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVI 65
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 556
NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TV
Sbjct: 66 PNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 125
Query: 557 KTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
KT WLDG+HVVFG+V+EG+DVV+ IE + ++ +P K V I+D
Sbjct: 126 KTDWLDGKHVVFGQVVEGLDVVKAIEKIGS-SSGKPTKPVVIAD 168
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 161 bits (391), Expect = 5e-40
Identities = 85/164 (51%), Positives = 104/164 (63%), Gaps = 7/164 (4%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 376
KV FDM I G IV+ L+ P+T ENF L +G G +KGSKFHRVI
Sbjct: 5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVI 64
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 556
NFM Q SIYG +FEDENF+ KH G G LSMANAG +TNGSQFFI TV
Sbjct: 65 PNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTV 124
Query: 557 KTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
KT WLDG+HVVFG+V+EG+DVV+ IE + ++ +P K V ++D
Sbjct: 125 KTDWLDGKHVVFGQVVEGLDVVKAIEKVGS-SSGKPTKPVVVAD 167
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 156 bits (378), Expect = 2e-38
Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 8/201 (3%)
Frame = +2
Query: 113 KLVLIMGTLTMALGILLFIASAKSD-EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKT 289
+ +L++ LT+ L LF + ++ + ++T++V D+ I +G IVIGL+G
Sbjct: 12 RCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDIDGQRLGRIVIGLYGTV 71
Query: 290 VPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXXRSIYGE 448
VPKT ENF L +G+ YKG+ FHR+I F+IQ SIYG
Sbjct: 72 VPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGG 131
Query: 449 RFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 628
F DENFK++H AG ++MAN G D+NGSQFFITTVK WL+G HVV GKV++GMD V
Sbjct: 132 TFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFA 191
Query: 629 IEMTXTGANDRPVKDVXISDT 691
IE + +P K V I+D+
Sbjct: 192 IEGGAGTYSGKPRKKVVIADS 212
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 153 bits (371), Expect = 1e-37
Identities = 83/164 (50%), Positives = 100/164 (60%), Gaps = 7/164 (4%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 376
KV FDM +G + G IV+ L+ T P+T ENF L G G YKGS FHRVI
Sbjct: 6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVI 65
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 556
FM Q SIYG +F+DENF KH G G LSMANAG +TNGSQFFI T
Sbjct: 66 PKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTE 125
Query: 557 KTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
KT WLDG+HVVFG+V+EG++VV+ IE + + R K V I+D
Sbjct: 126 KTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSG-RTSKPVVIAD 168
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 149 bits (362), Expect = 1e-36
Identities = 83/169 (49%), Positives = 99/169 (58%), Gaps = 8/169 (4%)
Frame = +2
Query: 206 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 361
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 362 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 541
FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 542 FITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
FI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P V I D
Sbjct: 124 FILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKPTSPVKIID 171
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 149 bits (362), Expect = 1e-36
Identities = 83/169 (49%), Positives = 99/169 (58%), Gaps = 8/169 (4%)
Frame = +2
Query: 206 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 361
K V D+ IG D + IVI LF VPKT ENF L G G +KGS
Sbjct: 4 KKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSS 63
Query: 362 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 541
FHRVIK FM Q SIYG +F DENF+L H GAG LSMAN G +TNGSQF
Sbjct: 64 FHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQF 123
Query: 542 FITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
FI + P LDG+HVVFGKV+EGM V++K+E+ T ++ +P V I D
Sbjct: 124 FILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGT-SDGKPTSPVKIID 171
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 149 bits (362), Expect = 1e-36
Identities = 82/165 (49%), Positives = 99/165 (60%), Gaps = 8/165 (4%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRV 373
K D+ IG + G IVI L+ VPKT ENF L +G G YKG++FHRV
Sbjct: 5 KCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRV 64
Query: 374 IKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITT 553
IK FMIQ SIYG +F+DENF+LKH G LSMAN+G +TNGSQFFITT
Sbjct: 65 IKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITT 124
Query: 554 VKTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
+T LDG+HVVFG+V +GM VV+ IE P +DV I D
Sbjct: 125 TRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHD 169
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 148 bits (359), Expect = 3e-36
Identities = 80/164 (48%), Positives = 97/164 (59%), Gaps = 7/164 (4%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 376
KV FD+ IG G +V+ LF P+T NF L G G YKGS FHR+I
Sbjct: 5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRII 64
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 556
FM Q SIYG +FEDENFKLKH G G LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTE 124
Query: 557 KTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
KT WLDG+HVVFGKV++G +VV+ +E + + P + V I D
Sbjct: 125 KTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGN-PSERVVIED 167
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 146 bits (353), Expect = 2e-35
Identities = 82/171 (47%), Positives = 101/171 (59%), Gaps = 6/171 (3%)
Frame = +2
Query: 194 PKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQ---KPEGE--GYKGS 358
P PK V FD+ IG G I + LF PKT ENF Q + G+ GYK
Sbjct: 26 PPNPK-NPVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKEC 84
Query: 359 KFHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQ 538
+FHRVIK+FM+Q SIYG +FEDENF KH G G LSMAN+G +TNG Q
Sbjct: 85 QFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQ 144
Query: 539 FFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTXTGANDRPVKDVXISD 688
FFIT K WLD +HVVFG+VL +G+ V++KIE G N+RP V I++
Sbjct: 145 FFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAIGPNNRPKLAVVITE 195
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 145 bits (351), Expect = 3e-35
Identities = 80/164 (48%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 376
+V FDM + IG I + LF T P T ENF L +G G +KGS FHRVI
Sbjct: 5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVI 64
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTV 556
FM Q SIYG +F+DENF KH GAG LSMAN+G +TNGSQFFI T
Sbjct: 65 PGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTD 124
Query: 557 KTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISD 688
KT WLDG+HVVFG+V++G+DVV+ IE + + + K V I+D
Sbjct: 125 KTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSG-KTSKVVTITD 167
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 130 bits (313), Expect = 1e-30
Identities = 73/144 (50%), Positives = 88/144 (61%), Gaps = 1/144 (0%)
Frame = +2
Query: 254 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 433
+G I + L+ + PKT ENF + Y FHRVI+ FMIQ +
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHCRNGY---YDNHLFHRVIRGFMIQTGDPLGDGTGG-Q 539
Query: 434 SIYGERFEDENFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 610
SI+G FEDE K L+H LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++G
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKG 599
Query: 611 MDVVQKIEMTXTGANDRPVKDVXI 682
MDVVQ IE T NDRP +DV I
Sbjct: 600 MDVVQGIEKVKTDKNDRPYQDVKI 623
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 126 bits (305), Expect = 1e-29
Identities = 64/151 (42%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Frame = +2
Query: 245 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXX 424
+ ++G + ++ K P+T NF +L+++ Y FHR++K+F++Q
Sbjct: 15 ETSMGPFTVEMYYKHSPRTCRNFLELSRRGY---YDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 425 XXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKV 601
SIYG +FEDE N +LKH GAG LSMANAG +TNGSQFFIT P LDG+H +FG+V
Sbjct: 72 G-ESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRV 130
Query: 602 LEGMDVVQKIEMTXTGANDRPVKDVXISDTK 694
GM+V++++ T DRP+ +V I TK
Sbjct: 131 CRGMEVIKRLGSVQTDNTDRPIHEVKILRTK 161
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 116 bits (280), Expect = 1e-26
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
Frame = +2
Query: 251 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 430
N+G I +F VPK+ ENF L Y G+ FHR IK FMIQ
Sbjct: 8 NLGDIKCEIFCDEVPKSAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPKGTGKGGT 64
Query: 431 RSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 607
SI+G++F DE LKH G LSMAN+G +TNGSQFFIT K P L+G + +FGKV+
Sbjct: 65 -SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIH 123
Query: 608 GMDVVQKIEMTXTGANDRPVKDVXIS 685
G +V+ +E T TG DRP+ ++ ++
Sbjct: 124 GFEVLDIMEKTQTGPGDRPLAEIRLN 149
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 97.5 bits (232), Expect = 8e-21
Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Frame = +2
Query: 188 EIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFH 367
++ K PK V F GD NI L P+ ENF L ++ Y G FH
Sbjct: 335 KVEKNPKKKGYVQFQTTHGDLNIE-----LHCDIAPRACENFITLCERGY---YNGVAFH 386
Query: 368 RVIKNFMIQXXXXXXXXXXXXRSIYGERFEDE-NFKLKHYGAGWLSMANAGKDTNGSQFF 544
R I+NFMIQ SI+G+ F+DE N KL H G G +SMAN+G TNGSQFF
Sbjct: 387 RSIRNFMIQGGDPTGTGKGG-ESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFF 445
Query: 545 ITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTXTGANDRPVKDVXI 682
+ L+ +H VFG V+ G+ + +E +DRP++++ I
Sbjct: 446 VLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEEIKI 491
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 95.9 bits (228), Expect = 3e-20
Identities = 58/151 (38%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Frame = +2
Query: 206 KVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG--------YKGSK 361
K +V D+ I D T+V LF + PKT+ENF L +G G YKGS
Sbjct: 4 KKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSF 63
Query: 362 FHRVIKNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQF 541
FHR++K Q SIY +F DE+ KL+H G LSM+ A +D GS F
Sbjct: 64 FHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHF 123
Query: 542 FITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 634
IT LD +VVFGK+++G ++++KIE
Sbjct: 124 HITFRPNQQLDRNNVVFGKLIQGKEILKKIE 154
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 80.2 bits (189), Expect = 1e-15
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Frame = +2
Query: 251 NIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX 430
++G IVI L P T +NF +L + + Y G FH V K+F Q
Sbjct: 8 SLGDIVIDLHSDKCPLTCKNFLKLCKI---KYYNGCLFHTVQKDFTAQTGDPTGTGAGGD 64
Query: 431 ---RSIYGER---FEDE-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKT-PWLDGRHV 586
+ +YGE+ ++DE + LKH G ++MA+ G++ N SQF+ T +LDG+H
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHT 124
Query: 587 VFGKVLEGMDVVQKIEMTXTGANDRPVKDVXISDT 691
VFG++ EG D + +I +RP K++ I T
Sbjct: 125 VFGQIAEGFDTLTRINEAYVDPKNRPYKNIRIKHT 159
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 79.4 bits (187), Expect = 2e-15
Identities = 62/167 (37%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Frame = +2
Query: 218 KVSFDMKIGDDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVI 376
KV FD+ + G IVI LF P+T ENF L G G YKGS F ++
Sbjct: 5 KVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTFDHIV 64
Query: 377 KNFMIQXXXXXXXXXXXXRSIYGERFEDENFKLKHY-GAGWLSMANAGKDTNGSQFFITT 553
+ M I+ E +DE F L H G G +SMA D+NGSQF I
Sbjct: 65 PDLM----WCGGDIIFENEPIHSEELDDEYFILNHEDGPGIISMA----DSNGSQFQIHM 116
Query: 554 VKTP-WLDGRHVVFGKVLEGMDVVQKIEM-TXTGANDRPVKDVXISD 688
+DG HVV GKV+EG+D+++ IE T P K V I+D
Sbjct: 117 KDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIAD 163
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 78.6 bits (185), Expect = 4e-15
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Frame = +2
Query: 257 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXXXXXR 433
G I + L+ K PK+ NF QL EGY + FHRVI F++Q
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL----EGYFDNTIFHRVIPGFLVQGGDPTGSGTGGD- 76
Query: 434 SIYGERFEDE-NFKLKHYGAGWLSMANAGK-DTNGSQFFITTVKTPWLDGRHVVFGKVL- 604
SIYG F DE + +L+ G ++MANA ++NGSQFF T K WLD +H +FGKV
Sbjct: 77 SIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKVTG 136
Query: 605 EGMDVVQKIEMTXTGANDRPV 667
+ + + ++ T +DRP+
Sbjct: 137 DSIYNLLRLGEVDTSKDDRPL 157
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 63.7 bits (148), Expect = 1e-10
Identities = 43/143 (30%), Positives = 69/143 (48%)
Frame = +2
Query: 257 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 436
G I + LF + P+ + F L QK + +KG F RVIKN+++Q +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 437 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMD 616
G+ + KH + N G + + + ITT P L+ + +VFG+VL+G D
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKGNNKD-FELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 617 VVQKIEMTXTGANDRPVKDVXIS 685
VVQ+IE T + +P + I+
Sbjct: 206 VVQEIEEVDTDEHFQPKSPIGIT 228
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 63.7 bits (148), Expect = 1e-10
Identities = 43/143 (30%), Positives = 69/143 (48%)
Frame = +2
Query: 257 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 436
G I + LF + P+ + F L QK + +KG F RVIKN+++Q +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 437 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMD 616
G+ + KH + N G + + + ITT P L+ + +VFG+VL+G D
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKGNNKD-FELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 617 VVQKIEMTXTGANDRPVKDVXIS 685
VVQ+IE T + +P + I+
Sbjct: 206 VVQEIEEVDTDEHFQPKSPIGIT 228
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 63.7 bits (148), Expect = 1e-10
Identities = 43/143 (30%), Positives = 69/143 (48%)
Frame = +2
Query: 257 GTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXRS 436
G I + LF + P+ + F L QK + +KG F RVIKN+++Q +
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQK---DHFKGMPFQRVIKNYLVQAGHSPSSIPVEEWT 146
Query: 437 IYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMD 616
G+ + KH + N G + + + ITT P L+ + +VFG+VL+G D
Sbjct: 147 AKGKLRGRLHIGPKHEAFMLGTPKNKGNNKD-FELLITTAPIPDLNDQLIVFGRVLKGED 205
Query: 617 VVQKIEMTXTGANDRPVKDVXIS 685
VVQ+IE T + +P + I+
Sbjct: 206 VVQEIEEVDTDEHFQPKSPIGIT 228
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Frame = +2
Query: 245 DDNIGTIVIGLFGKTVPKTTENFFQLAQKPEGEGY-KGSKFHRVIKNFMIQXXXXXXXXX 421
D G++ I LF T P + F + Q +GY KG F RV+K+F+IQ
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFCQ----DGYFKGFLFSRVVKHFVIQAGDSAEFDA 138
Query: 422 XXXRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKV 601
++ + D + K + + G A + G +FFI + + L+ + VFG+V
Sbjct: 139 VKDWALDRKNI-DTSLKHEEFMVG---TPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRV 194
Query: 602 LEGMDVVQKIEMTXTGANDRPVKDVXI 682
+G DVVQ+IE T +P + I
Sbjct: 195 SKGQDVVQEIEEVETDDQYQPKSPIEI 221
>At1g26940.1 68414.m03284 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 226
Score = 51.2 bits (117), Expect = 7e-07
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 7/181 (3%)
Frame = +2
Query: 125 IMGTLTMALGILLFIASAKSDEIPKGPKV-THKVSFDMKIGDDNIGTIVIGLFGKTVPKT 301
I L + L L F++ AK+ +P P++ + +V F GD I G + PKT
Sbjct: 3 ITRNLILGLACLAFVSIAKA--LPHEPELGSARVVFQTSYGD-----IEFGFYPTVAPKT 55
Query: 302 TENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXX----RSIYGERFEDENF 469
++ F+L + GY + F RV K F+ Q R ++ E
Sbjct: 56 VDHIFKLVRLG---GYNTNHFFRVDKGFVAQVADVASGRSAPMNEEQRKEAEKKIVGEFS 112
Query: 470 KLKHYGAGWLSMANAGKDTNGSQ--FFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTX 643
+KH G LSM D N +Q F + P LD ++ VFGKV +G + + K+E
Sbjct: 113 DVKHV-RGTLSMGRYD-DPNSAQSSFSMLLGNAPHLDRQYAVFGKVTKGDETLSKLEEVP 170
Query: 644 T 646
T
Sbjct: 171 T 171
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 20/151 (13%)
Frame = +2
Query: 254 IGTIVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXXR 433
+G +V+GL+G+ VP T F ++ YK + H++
Sbjct: 85 LGRVVLGLYGRHVPITVSTFKRMCTS-SSTSYKNTPVHKIFPGQYFLAGRQGGGRRDTAE 143
Query: 434 SIYGERFEDEN--------FKLKHYGAGWLSMANAGKDTNGS----------QFFITTVK 559
Y R N F L H AG +S+ + D + +F ITT
Sbjct: 144 VGYSLRDLPRNTDVVNSKAFLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFLITTGP 203
Query: 560 --TPWLDGRHVVFGKVLEGMDVVQKIEMTXT 646
+P LDG ++VFG VLEG+DVV I T
Sbjct: 204 GPSPQLDGGNIVFGTVLEGLDVVTSISSIPT 234
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 527 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTXT 646
NG++F IT V +P L+ +V GKVLEGM VV+K+ T
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKT 269
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Frame = +2
Query: 107 RTKLVLIMGTLTMALGILLFIASAKSDEIPKGPKVTH--------KVSFDMKIGDDNIGT 262
++ L+L++ T T L LL + A++D I P +T+ K D+ I + IG
Sbjct: 50 KSSLLLLLTTQT-TLTPLLDFSKAQADTIAN-PNLTNCENRIPTKKAFIDVSIDGEPIGR 107
Query: 263 IVIGLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFM 388
I+IGL+G VP T F + G Y+ F +++ ++
Sbjct: 108 IIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYV 149
>At4g23140.2 68417.m03338 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 680
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 125 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 304
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 305 ENFFQ---LAQKPEGEGYKGS 358
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At4g23140.1 68417.m03337 receptor-like protein kinase 5 (RLK5)
identical to receptor-like protein kinase 5 [Arabidopsis
thaliana] GI:13506747; contains Pfam domain PF00069:
Protein kinase domain; identical to cDNA receptor-like
protein kinase 5 (RLK5) GI:13506746
Length = 674
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 125 IMGTLTMALGILLFIASAKSDEIPKGPKVTHKVSFDMKIGDDNIGTIVIGLFGKTVPKTT 304
++ + L +LLFIA + K K T + ++GDD + L +T+ T
Sbjct: 289 VLVVAVVVLAVLLFIALVGYCFLAKKKKKTFDTASASEVGDDMATADSLQLDYRTIQTAT 348
Query: 305 ENFFQ---LAQKPEGEGYKGS 358
+F + + + GE YKG+
Sbjct: 349 NDFAESNKIGRGGFGEVYKGT 369
>At3g02610.1 68416.m00252 acyl-[acyl-carrier-protein] desaturase,
putative / stearoyl-ACP desaturase, putative similar to
Acyl-[acyl-carrier protein] desaturase from Spinacia
oleracea SP|P28645, Cucumis sativus SP|P32061, Ricinus
communis SP|P22337; contains Pfam profile PF03405 Fatty
acid desaturase
Length = 411
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 696 VFVSDIXTSLTGRSFAPVXVISIFCTTSIPSKTLPKT 586
V VS T+ G SF+P ++ + C + PSKT +T
Sbjct: 19 VAVSFPRTTCLGSSFSPPRLLRVSCVATNPSKTSEET 55
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 434 SIYGERFEDENFKLKH--YGAGWLSMANAGKDTNGSQFFITTVKTP 565
S Y F ++ H Y WLS G + N S +ITT P
Sbjct: 123 SFYSRLFPRKSLHFVHSSYSLHWLSKVPKGLEKNSSSVYITTSSPP 168
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,175
Number of Sequences: 28952
Number of extensions: 290172
Number of successful extensions: 670
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -